RNA–Protein interactions for RNA: ENST00000476581.6

XPC-205, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 1 (best)

Gene XPC, Length 2,944 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-205ENST00000476581 MDN1Q9NU22 5596 aa4.42□□□□□ -1.7
XPC-205ENST00000476581 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.35□□□□□ -1.71
XPC-205ENST00000476581 MT1EP04732 61 aa4.32□□□□□ -1.72
XPC-205ENST00000476581 SPRR2FQ96RM1 72 aa4.3□□□□□ -1.72
XPC-205ENST00000476581 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
XPC-205ENST00000476581 KRTAP4-7Q9BYR0 210 aa4.24□□□□□ -1.73
XPC-205ENST00000476581 MT1LQ93083 61 aa4.23□□□□□ -1.73
XPC-205ENST00000476581 KRTAP5-9P26371 169 aa4.22□□□□□ -1.73
XPC-205ENST00000476581 DSTQ03001 7570 aaKnown RBP4.22□□□□□ -1.73
XPC-205ENST00000476581 KRTAP2-3P0C7H8 128 aa4.21□□□□□ -1.74
XPC-205ENST00000476581 KRTAP2-4Q9BYR9 128 aa4.21□□□□□ -1.74
XPC-205ENST00000476581 KRTAP2-1Q9BYU5 128 aa4.21□□□□□ -1.74
XPC-205ENST00000476581 KRTAP9-6A8MVA2 160 aa4.15□□□□□ -1.74
XPC-205ENST00000476581 KRTAP4-3Q9BYR4 195 aa4.15□□□□□ -1.75
XPC-205ENST00000476581 KRTAP6-3Q3LI67 103 aa4.14□□□□□ -1.75
XPC-205ENST00000476581 KRTAP19-3Q7Z4W3 81 aa4.14□□□□□ -1.75
XPC-205ENST00000476581 LCE1AQ5T7P2 110 aa4.12□□□□□ -1.75
XPC-205ENST00000476581 KRTAP9-7A8MTY7 169 aa4.11□□□□□ -1.75
XPC-205ENST00000476581 LCE5AQ5TCM9 118 aa4.09□□□□□ -1.75
XPC-205ENST00000476581 SPRR2EP22531 72 aa4.08□□□□□ -1.76
XPC-205ENST00000476581 SPRR2BP35325 72 aa4.08□□□□□ -1.76
XPC-205ENST00000476581 SPRR2AP35326 72 aa4.08□□□□□ -1.76
XPC-205ENST00000476581 MT1MQ8N339 61 aa4.07□□□□□ -1.76
XPC-205ENST00000476581 MT1GP13640 62 aa4.05□□□□□ -1.76
XPC-205ENST00000476581 NEBP20929 6669 aa4.03□□□□□ -1.76
XPC-205ENST00000476581 LOC100996750A0A140TA64 210 aa3.98□□□□□ -1.77
XPC-205ENST00000476581 KRTAP19-4Q3LI73 84 aa3.92□□□□□ -1.78
XPC-205ENST00000476581 SPRR2DP22532 72 aa3.91□□□□□ -1.78
XPC-205ENST00000476581 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
XPC-205ENST00000476581 LCE3BQ5TA77 95 aa3.77□□□□□ -1.81
XPC-205ENST00000476581 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
XPC-205ENST00000476581 SYNE1Q8NF91 8797 aaKnown RBP3.64□□□□□ -1.83
XPC-205ENST00000476581 KRTAP6-1Q3LI64 71 aa3.61□□□□□ -1.83
XPC-205ENST00000476581 KRTAP20-1Q3LI63 56 aa3.6□□□□□ -1.83
XPC-205ENST00000476581 KRTAP2-2Q9BYT5 123 aa3.54□□□□□ -1.84
XPC-205ENST00000476581 MT1AP04731 61 aa3.53□□□□□ -1.84
XPC-205ENST00000476581 KRTAP4-9Q9BYQ8 210 aa3.52□□□□□ -1.85
XPC-205ENST00000476581 KRTAP5-4Q6L8H1 288 aa3.51□□□□□ -1.85
XPC-205ENST00000476581 HMCN1Q96RW7 5635 aa3.5□□□□□ -1.85
XPC-205ENST00000476581 MT4P47944 62 aa3.48□□□□□ -1.85
XPC-205ENST00000476581 KRTAP4-6Q9BYQ5 205 aa3.48□□□□□ -1.85
XPC-205ENST00000476581 PRM1P04553 51 aa3.42□□□□□ -1.86
XPC-205ENST00000476581 LCE1DQ5T752 114 aa3.41□□□□□ -1.86
XPC-205ENST00000476581 KRTAP9-4Q9BYQ2 154 aa3.39□□□□□ -1.87
XPC-205ENST00000476581 LCE4AQ5TA78 99 aa3.37□□□□□ -1.87
XPC-205ENST00000476581 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
XPC-205ENST00000476581 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
XPC-205ENST00000476581 LCE3DQ9BYE3 92 aa3.36□□□□□ -1.87
XPC-205ENST00000476581 KRTAP6-2Q3LI66 62 aa3.33□□□□□ -1.88
XPC-205ENST00000476581 KRTAP20-2Q3LI61 65 aa3.32□□□□□ -1.88
XPC-205ENST00000476581 KRTAP5-3Q6L8H2 238 aa3.21□□□□□ -1.9
XPC-205ENST00000476581 KRTAP5-2Q701N4 177 aa3.18□□□□□ -1.9
XPC-205ENST00000476581 MT3P25713 68 aa3.17□□□□□ -1.9
XPC-205ENST00000476581 AHNAK2Q8IVF2 5795 aa3.07□□□□□ -1.92
XPC-205ENST00000476581 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
XPC-205ENST00000476581 KRTAP4-11Q9BYQ6 195 aa2.89□□□□□ -1.95
XPC-205ENST00000476581 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
XPC-205ENST00000476581 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
XPC-205ENST00000476581 KRTAP5-8O75690 187 aa2.8□□□□□ -1.96
XPC-205ENST00000476581 GPR98Q8WXG9 6306 aa2.78□□□□□ -1.96
XPC-205ENST00000476581 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
XPC-205ENST00000476581 LCE1BQ5T7P3 118 aa2.71□□□□□ -1.98
XPC-205ENST00000476581 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
XPC-205ENST00000476581 KRTAP4-2Q9BYR5 136 aa2.68□□□□□ -1.98
XPC-205ENST00000476581 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
XPC-205ENST00000476581 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
XPC-205ENST00000476581 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
XPC-205ENST00000476581 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
XPC-205ENST00000476581 KRTAP9-9Q9BYP9 154 aa2.57□□□□□ -2
XPC-205ENST00000476581 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.4□□□□□ -2.02
XPC-205ENST00000476581 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
XPC-205ENST00000476581 KRTAP4-12Q9BQ66 201 aa2.33□□□□□ -2.04
XPC-205ENST00000476581 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.04
XPC-205ENST00000476581 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
XPC-205ENST00000476581 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
XPC-205ENST00000476581 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
XPC-205ENST00000476581 PHGR1C9JFL3 82 aa2□□□□□ -2.09
XPC-205ENST00000476581 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 203.5 ms