RNA–Protein interactions for RNA: ENST00000476467.1

PSMB4-204, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 2,067 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-204ENST00000476467 SPRR5A0A1B0GTR4 108 aa5□□□□□ -1.61
PSMB4-204ENST00000476467 SPRR2FQ96RM1 72 aa4.96□□□□□ -1.61
PSMB4-204ENST00000476467 KRTAP19-7Q3SYF9 63 aa4.92□□□□□ -1.62
PSMB4-204ENST00000476467 KRTAP19-5Q3LI72 72 aa4.92□□□□□ -1.62
PSMB4-204ENST00000476467 KRTAP12-3P60328 96 aa4.88□□□□□ -1.63
PSMB4-204ENST00000476467 MT1EP04732 61 aa4.87□□□□□ -1.63
PSMB4-204ENST00000476467 MUC12Q9UKN1 5478 aa4.85□□□□□ -1.63
PSMB4-204ENST00000476467 MDN1Q9NU22 5596 aa4.8□□□□□ -1.64
PSMB4-204ENST00000476467 SPRR2EP22531 72 aa4.79□□□□□ -1.64
PSMB4-204ENST00000476467 SPRR2BP35325 72 aa4.79□□□□□ -1.64
PSMB4-204ENST00000476467 SPRR2AP35326 72 aa4.79□□□□□ -1.64
PSMB4-204ENST00000476467 LCE1AQ5T7P2 110 aa4.78□□□□□ -1.64
PSMB4-204ENST00000476467 NEBP20929 6669 aa4.77□□□□□ -1.65
PSMB4-204ENST00000476467 KRTAP19-3Q7Z4W3 81 aa4.73□□□□□ -1.65
PSMB4-204ENST00000476467 MT1LQ93083 61 aa4.72□□□□□ -1.65
PSMB4-204ENST00000476467 KRTAP20-1Q3LI63 56 aa4.68□□□□□ -1.66
PSMB4-204ENST00000476467 LCE5AQ5TCM9 118 aa4.68□□□□□ -1.66
PSMB4-204ENST00000476467 MT1GP13640 62 aa4.66□□□□□ -1.66
PSMB4-204ENST00000476467 LCE3BQ5TA77 95 aa4.63□□□□□ -1.67
PSMB4-204ENST00000476467 SPRR2DP22532 72 aa4.62□□□□□ -1.67
PSMB4-204ENST00000476467 INE1O15225 51 aa4.61□□□□□ -1.67
PSMB4-204ENST00000476467 KRTAP19-4Q3LI73 84 aa4.6□□□□□ -1.67
PSMB4-204ENST00000476467 MT1MQ8N339 61 aa4.6□□□□□ -1.67
PSMB4-204ENST00000476467 LCE3CQ5T5A8 94 aa4.59□□□□□ -1.67
PSMB4-204ENST00000476467 KRTAP4-12Q9BQ66 201 aa4.58□□□□□ -1.68
PSMB4-204ENST00000476467 KRTAP9-9Q9BYP9 154 aa4.53□□□□□ -1.68
PSMB4-204ENST00000476467 KRTAP9-4Q9BYQ2 154 aa4.53□□□□□ -1.68
PSMB4-204ENST00000476467 KRTAP4-7Q9BYR0 210 aa4.5□□□□□ -1.69
PSMB4-204ENST00000476467 KRTAP2-3P0C7H8 128 aa4.47□□□□□ -1.69
PSMB4-204ENST00000476467 KRTAP4-3Q9BYR4 195 aa4.47□□□□□ -1.69
PSMB4-204ENST00000476467 KRTAP2-4Q9BYR9 128 aa4.47□□□□□ -1.69
PSMB4-204ENST00000476467 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
PSMB4-204ENST00000476467 DSTQ03001 7570 aaKnown RBP4.41□□□□□ -1.7
PSMB4-204ENST00000476467 GPR98Q8WXG9 6306 aa4.38□□□□□ -1.71
PSMB4-204ENST00000476467 LCE1DQ5T752 114 aa4.35□□□□□ -1.71
PSMB4-204ENST00000476467 KRTAP2-2Q9BYT5 123 aa4.35□□□□□ -1.71
PSMB4-204ENST00000476467 KRTAP2-1Q9BYU5 128 aa4.35□□□□□ -1.71
PSMB4-204ENST00000476467 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
PSMB4-204ENST00000476467 KRTAP4-2Q9BYR5 136 aa4.2□□□□□ -1.74
PSMB4-204ENST00000476467 KRTAP5-5Q701N2 237 aaPredicted RBP4.17□□□□□ -1.74
PSMB4-204ENST00000476467 KRTAP5-4Q6L8H1 288 aa4.12□□□□□ -1.75
PSMB4-204ENST00000476467 LCE4AQ5TA78 99 aa4.12□□□□□ -1.75
PSMB4-204ENST00000476467 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
PSMB4-204ENST00000476467 MT1AP04731 61 aa4.03□□□□□ -1.76
PSMB4-204ENST00000476467 MT4P47944 62 aa4□□□□□ -1.77
PSMB4-204ENST00000476467 SYNE1Q8NF91 8797 aaKnown RBP3.97□□□□□ -1.77
PSMB4-204ENST00000476467 KRTAP6-1Q3LI64 71 aa3.97□□□□□ -1.77
PSMB4-204ENST00000476467 KRTAP12-4P60329 112 aa3.94□□□□□ -1.78
PSMB4-204ENST00000476467 HMCN1Q96RW7 5635 aa3.93□□□□□ -1.78
PSMB4-204ENST00000476467 KRTAP5-3Q6L8H2 238 aa3.93□□□□□ -1.78
PSMB4-204ENST00000476467 KRTAP20-2Q3LI61 65 aa3.86□□□□□ -1.79
PSMB4-204ENST00000476467 AHNAK2Q8IVF2 5795 aa3.81□□□□□ -1.8
PSMB4-204ENST00000476467 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
PSMB4-204ENST00000476467 KRTAP5-10Q6L8G5 202 aa3.71□□□□□ -1.82
PSMB4-204ENST00000476467 KRTAP5-2Q701N4 177 aa3.7□□□□□ -1.82
PSMB4-204ENST00000476467 KRTAP5-7Q6L8G8 165 aa3.67□□□□□ -1.82
PSMB4-204ENST00000476467 MT3P25713 68 aa3.66□□□□□ -1.82
PSMB4-204ENST00000476467 LCE3DQ9BYE3 92 aa3.5□□□□□ -1.85
PSMB4-204ENST00000476467 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
PSMB4-204ENST00000476467 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.87
PSMB4-204ENST00000476467 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.87
PSMB4-204ENST00000476467 KRTAP5-8O75690 187 aa3.29□□□□□ -1.88
PSMB4-204ENST00000476467 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
PSMB4-204ENST00000476467 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
PSMB4-204ENST00000476467 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
PSMB4-204ENST00000476467 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
PSMB4-204ENST00000476467 PRM1P04553 51 aa3.2□□□□□ -1.9
PSMB4-204ENST00000476467 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
PSMB4-204ENST00000476467 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
PSMB4-204ENST00000476467 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
PSMB4-204ENST00000476467 KRTAP5-11Q6L8G4 156 aa2.7□□□□□ -1.98
PSMB4-204ENST00000476467 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
PSMB4-204ENST00000476467 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
PSMB4-204ENST00000476467 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
PSMB4-204ENST00000476467 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
PSMB4-204ENST00000476467 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
PSMB4-204ENST00000476467 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
PSMB4-204ENST00000476467 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 173.4 ms