RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 KRTAP10-7P60409 375 aaPredicted RBP3.53□□□□□ -1.84
CCDC66-216ENST00000476142 KRTAP4-11Q9BYQ6 195 aa3.51□□□□□ -1.85
CCDC66-216ENST00000476142 KRTAP6-3Q3LI67 103 aa3.5□□□□□ -1.85
CCDC66-216ENST00000476142 USH2AO75445 5202 aa3.5□□□□□ -1.85
CCDC66-216ENST00000476142 KRTAP8-1Q8IUC2 63 aa3.5□□□□□ -1.85
CCDC66-216ENST00000476142 SPRR5A0A1B0GTR4 108 aa3.47□□□□□ -1.85
CCDC66-216ENST00000476142 KRTAP12-3P60328 96 aa3.46□□□□□ -1.85
CCDC66-216ENST00000476142 KRTAP20-1Q3LI63 56 aa3.38□□□□□ -1.87
CCDC66-216ENST00000476142 KMT2DO14686 5537 aa3.38□□□□□ -1.87
CCDC66-216ENST00000476142 KRTAP19-5Q3LI72 72 aa3.37□□□□□ -1.87
CCDC66-216ENST00000476142 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
CCDC66-216ENST00000476142 KRTAP2-3P0C7H8 128 aa3.25□□□□□ -1.89
CCDC66-216ENST00000476142 KRTAP2-4Q9BYR9 128 aa3.25□□□□□ -1.89
CCDC66-216ENST00000476142 FSIP2Q5CZC0 6907 aa3.25□□□□□ -1.89
CCDC66-216ENST00000476142 LCE3CQ5T5A8 94 aa3.24□□□□□ -1.89
CCDC66-216ENST00000476142 KRTAP19-7Q3SYF9 63 aa3.22□□□□□ -1.89
CCDC66-216ENST00000476142 KRTAP19-6Q3LI70 58 aa3.21□□□□□ -1.9
CCDC66-216ENST00000476142 NEBP20929 6669 aa3.16□□□□□ -1.9
CCDC66-216ENST00000476142 MT1EP04732 61 aa3.14□□□□□ -1.91
CCDC66-216ENST00000476142 KRTAP19-4Q3LI73 84 aa3.12□□□□□ -1.91
CCDC66-216ENST00000476142 MT1LQ93083 61 aa3.12□□□□□ -1.91
CCDC66-216ENST00000476142 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
CCDC66-216ENST00000476142 LCE5AQ5TCM9 118 aa3.09□□□□□ -1.91
CCDC66-216ENST00000476142 KRTAP5-9P26371 169 aa3.09□□□□□ -1.92
CCDC66-216ENST00000476142 KRTAP2-2Q9BYT5 123 aa3.08□□□□□ -1.92
CCDC66-216ENST00000476142 KRTAP2-1Q9BYU5 128 aa3.08□□□□□ -1.92
CCDC66-216ENST00000476142 FCGBPQ9Y6R7 5405 aaPredicted RBP3.07□□□□□ -1.92
CCDC66-216ENST00000476142 MUC12Q9UKN1 5478 aa3.01□□□□□ -1.93
CCDC66-216ENST00000476142 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
CCDC66-216ENST00000476142 INE1O15225 51 aa2.97□□□□□ -1.93
CCDC66-216ENST00000476142 KRTAP19-3Q7Z4W3 81 aa2.96□□□□□ -1.94
CCDC66-216ENST00000476142 SPRR2FQ96RM1 72 aa2.95□□□□□ -1.94
CCDC66-216ENST00000476142 MT1MQ8N339 61 aa2.95□□□□□ -1.94
CCDC66-216ENST00000476142 MT1GP13640 62 aa2.94□□□□□ -1.94
CCDC66-216ENST00000476142 MACF1Q9UPN3 7388 aaKnown RBP2.91□□□□□ -1.94
CCDC66-216ENST00000476142 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.88□□□□□ -1.95
CCDC66-216ENST00000476142 LCE1AQ5T7P2 110 aa2.87□□□□□ -1.95
CCDC66-216ENST00000476142 SYNE2Q8WXH0 6885 aaKnown RBP2.86□□□□□ -1.95
CCDC66-216ENST00000476142 KRTAP5-7Q6L8G8 165 aa2.85□□□□□ -1.95
CCDC66-216ENST00000476142 DSTQ03001 7570 aaKnown RBP2.84□□□□□ -1.96
CCDC66-216ENST00000476142 MDN1Q9NU22 5596 aa2.8□□□□□ -1.96
CCDC66-216ENST00000476142 SPRR2EP22531 72 aa2.72□□□□□ -1.97
CCDC66-216ENST00000476142 SPRR2BP35325 72 aa2.72□□□□□ -1.97
CCDC66-216ENST00000476142 SPRR2AP35326 72 aa2.72□□□□□ -1.97
CCDC66-216ENST00000476142 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
CCDC66-216ENST00000476142 KRTAP5-10Q6L8G5 202 aa2.69□□□□□ -1.98
CCDC66-216ENST00000476142 KRTAP6-1Q3LI64 71 aa2.66□□□□□ -1.98
CCDC66-216ENST00000476142 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
CCDC66-216ENST00000476142 SPRR2DP22532 72 aa2.63□□□□□ -1.99
CCDC66-216ENST00000476142 MT1AP04731 61 aa2.62□□□□□ -1.99
CCDC66-216ENST00000476142 KRTAP12-4P60329 112 aa2.61□□□□□ -1.99
CCDC66-216ENST00000476142 KRTAP5-5Q701N2 237 aaPredicted RBP2.59□□□□□ -2
CCDC66-216ENST00000476142 SYNE1Q8NF91 8797 aaKnown RBP2.58□□□□□ -2
CCDC66-216ENST00000476142 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
CCDC66-216ENST00000476142 LCE1FQ5T754 118 aa2.53□□□□□ -2
CCDC66-216ENST00000476142 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
CCDC66-216ENST00000476142 KRTAP5-4Q6L8H1 288 aa2.45□□□□□ -2.02
CCDC66-216ENST00000476142 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
CCDC66-216ENST00000476142 KRTAP6-2Q3LI66 62 aa2.42□□□□□ -2.02
CCDC66-216ENST00000476142 MT3P25713 68 aa2.37□□□□□ -2.03
CCDC66-216ENST00000476142 OBSCNQ5VST9 7968 aa2.33□□□□□ -2.04
CCDC66-216ENST00000476142 MT4P47944 62 aa2.32□□□□□ -2.04
CCDC66-216ENST00000476142 PRM1P04553 51 aa2.3□□□□□ -2.04
CCDC66-216ENST00000476142 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
CCDC66-216ENST00000476142 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
CCDC66-216ENST00000476142 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
CCDC66-216ENST00000476142 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
CCDC66-216ENST00000476142 LCE1EQ5T753 118 aa2.22□□□□□ -2.05
CCDC66-216ENST00000476142 KRTAP20-2Q3LI61 65 aa2.21□□□□□ -2.05
CCDC66-216ENST00000476142 MUC5ACP98088 5654 aa2.2□□□□□ -2.06
CCDC66-216ENST00000476142 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.07
CCDC66-216ENST00000476142 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
CCDC66-216ENST00000476142 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
CCDC66-216ENST00000476142 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
CCDC66-216ENST00000476142 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
CCDC66-216ENST00000476142 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
CCDC66-216ENST00000476142 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
CCDC66-216ENST00000476142 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 36.4 ms