RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 SPRR2FQ96RM1 72 aa6.65□□□□□ -1.34
ATG4B-217ENST00000475693 MDN1Q9NU22 5596 aa6.65□□□□□ -1.35
ATG4B-217ENST00000475693 MT1EP04732 61 aa6.6□□□□□ -1.35
ATG4B-217ENST00000475693 INE1O15225 51 aa6.56□□□□□ -1.36
ATG4B-217ENST00000475693 KRTAP5-9P26371 169 aa6.53□□□□□ -1.36
ATG4B-217ENST00000475693 KRTAP6-3Q3LI67 103 aa6.49□□□□□ -1.37
ATG4B-217ENST00000475693 KRTAP9-7A8MTY7 169 aa6.48□□□□□ -1.37
ATG4B-217ENST00000475693 MT1LQ93083 61 aa6.44□□□□□ -1.38
ATG4B-217ENST00000475693 KRTAP4-7Q9BYR0 210 aa6.38□□□□□ -1.39
ATG4B-217ENST00000475693 LCE1AQ5T7P2 110 aa6.35□□□□□ -1.39
ATG4B-217ENST00000475693 KRTAP19-3Q7Z4W3 81 aa6.35□□□□□ -1.39
ATG4B-217ENST00000475693 SPRR2EP22531 72 aa6.33□□□□□ -1.4
ATG4B-217ENST00000475693 SPRR2BP35325 72 aa6.33□□□□□ -1.4
ATG4B-217ENST00000475693 SPRR2AP35326 72 aa6.33□□□□□ -1.4
ATG4B-217ENST00000475693 DSTQ03001 7570 aaKnown RBP6.32□□□□□ -1.4
ATG4B-217ENST00000475693 LCE5AQ5TCM9 118 aa6.27□□□□□ -1.41
ATG4B-217ENST00000475693 KRTAP4-3Q9BYR4 195 aa6.26□□□□□ -1.41
ATG4B-217ENST00000475693 MT1GP13640 62 aa6.24□□□□□ -1.41
ATG4B-217ENST00000475693 NEBP20929 6669 aa6.24□□□□□ -1.41
ATG4B-217ENST00000475693 LCE3CQ5T5A8 94 aa6.23□□□□□ -1.41
ATG4B-217ENST00000475693 MT1MQ8N339 61 aa6.23□□□□□ -1.41
ATG4B-217ENST00000475693 SPRR2DP22532 72 aa6.09□□□□□ -1.43
ATG4B-217ENST00000475693 KRTAP19-4Q3LI73 84 aa6.02□□□□□ -1.45
ATG4B-217ENST00000475693 KRTAP9-6A8MVA2 160 aa6.01□□□□□ -1.45
ATG4B-217ENST00000475693 LOC100996750A0A140TA64 210 aa6□□□□□ -1.45
ATG4B-217ENST00000475693 LCE3BQ5TA77 95 aa5.86□□□□□ -1.47
ATG4B-217ENST00000475693 KRTAP2-3P0C7H8 128 aa5.84□□□□□ -1.47
ATG4B-217ENST00000475693 KRTAP2-4Q9BYR9 128 aa5.84□□□□□ -1.47
ATG4B-217ENST00000475693 KRTAP2-1Q9BYU5 128 aa5.84□□□□□ -1.47
ATG4B-217ENST00000475693 KRTAP20-1Q3LI63 56 aa5.69□□□□□ -1.5
ATG4B-217ENST00000475693 KRTAP5-5Q701N2 237 aaPredicted RBP5.6□□□□□ -1.51
ATG4B-217ENST00000475693 KRTAP2-2Q9BYT5 123 aa5.59□□□□□ -1.52
ATG4B-217ENST00000475693 SYNE1Q8NF91 8797 aaKnown RBP5.51□□□□□ -1.53
ATG4B-217ENST00000475693 KRTAP6-1Q3LI64 71 aa5.48□□□□□ -1.53
ATG4B-217ENST00000475693 KRTAP4-9Q9BYQ8 210 aa5.43□□□□□ -1.54
ATG4B-217ENST00000475693 MT1AP04731 61 aa5.42□□□□□ -1.54
ATG4B-217ENST00000475693 KRTAP5-4Q6L8H1 288 aa5.41□□□□□ -1.54
ATG4B-217ENST00000475693 MT4P47944 62 aa5.39□□□□□ -1.55
ATG4B-217ENST00000475693 KRTAP4-6Q9BYQ5 205 aa5.33□□□□□ -1.56
ATG4B-217ENST00000475693 HMCN1Q96RW7 5635 aa5.31□□□□□ -1.56
ATG4B-217ENST00000475693 LCE4AQ5TA78 99 aa5.29□□□□□ -1.56
ATG4B-217ENST00000475693 LCE1DQ5T752 114 aa5.27□□□□□ -1.57
ATG4B-217ENST00000475693 KRTAP12-4P60329 112 aa5.21□□□□□ -1.58
ATG4B-217ENST00000475693 KRTAP9-4Q9BYQ2 154 aa5.19□□□□□ -1.58
ATG4B-217ENST00000475693 KRTAP20-2Q3LI61 65 aa5.12□□□□□ -1.59
ATG4B-217ENST00000475693 KRTAP6-2Q3LI66 62 aa5.08□□□□□ -1.6
ATG4B-217ENST00000475693 OBSCNQ5VST9 7968 aa5.04□□□□□ -1.6
ATG4B-217ENST00000475693 KRTAP5-3Q6L8H2 238 aa4.92□□□□□ -1.62
ATG4B-217ENST00000475693 MT3P25713 68 aa4.91□□□□□ -1.62
ATG4B-217ENST00000475693 KRTAP5-2Q701N4 177 aa4.87□□□□□ -1.63
ATG4B-217ENST00000475693 LCE3DQ9BYE3 92 aa4.76□□□□□ -1.65
ATG4B-217ENST00000475693 AHNAK2Q8IVF2 5795 aa4.75□□□□□ -1.65
ATG4B-217ENST00000475693 LCE3EQ5T5B0 92 aa4.73□□□□□ -1.65
ATG4B-217ENST00000475693 LCE1FQ5T754 118 aa4.54□□□□□ -1.68
ATG4B-217ENST00000475693 PRM1P04553 51 aa4.52□□□□□ -1.69
ATG4B-217ENST00000475693 KRTAP4-11Q9BYQ6 195 aa4.48□□□□□ -1.69
ATG4B-217ENST00000475693 GPR98Q8WXG9 6306 aa4.44□□□□□ -1.7
ATG4B-217ENST00000475693 KRTAP5-10Q6L8G5 202 aa4.44□□□□□ -1.7
ATG4B-217ENST00000475693 LCE1EQ5T753 118 aa4.37□□□□□ -1.71
ATG4B-217ENST00000475693 KRTAP5-8O75690 187 aa4.33□□□□□ -1.72
ATG4B-217ENST00000475693 KRTAP5-1Q6L8H4 278 aa4.29□□□□□ -1.72
ATG4B-217ENST00000475693 MUC5ACP98088 5654 aa4.21□□□□□ -1.74
ATG4B-217ENST00000475693 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
ATG4B-217ENST00000475693 LCE1BQ5T7P3 118 aa4.17□□□□□ -1.74
ATG4B-217ENST00000475693 KRTAP4-2Q9BYR5 136 aa4.08□□□□□ -1.76
ATG4B-217ENST00000475693 KRTAP5-7Q6L8G8 165 aa4.07□□□□□ -1.76
ATG4B-217ENST00000475693 LCE1CQ5T751 118 aa3.99□□□□□ -1.77
ATG4B-217ENST00000475693 MUC5BQ9HC84 5762 aaPredicted RBP3.93□□□□□ -1.78
ATG4B-217ENST00000475693 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
ATG4B-217ENST00000475693 AHNAKQ09666 5890 aaKnown RBP3.61□□□□□ -1.83
ATG4B-217ENST00000475693 KRTAP4-12Q9BQ66 201 aa3.58□□□□□ -1.84
ATG4B-217ENST00000475693 KRTAP21-2Q3LI59 83 aa3.57□□□□□ -1.84
ATG4B-217ENST00000475693 KRTAP5-11Q6L8G4 156 aa3.52□□□□□ -1.85
ATG4B-217ENST00000475693 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
ATG4B-217ENST00000475693 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
ATG4B-217ENST00000475693 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
ATG4B-217ENST00000475693 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
ATG4B-217ENST00000475693 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 55.4 ms