RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 C10orf95Q9H7T3 257 aa4.28□□□□□ -1.72
CCDC57-208ENST00000475635 LCE3AQ5TA76 89 aa4.26□□□□□ -1.73
CCDC57-208ENST00000475635 KRTAP5-7Q6L8G8 165 aa4.24□□□□□ -1.73
CCDC57-208ENST00000475635 H7BZZ5 65 aa4.22□□□□□ -1.73
CCDC57-208ENST00000475635 KRTAP5-3Q6L8H2 238 aa4.22□□□□□ -1.73
CCDC57-208ENST00000475635 ATP5EP56381 51 aaPredicted RBP4.2□□□□□ -1.74
CCDC57-208ENST00000475635 TNP1P09430 55 aa4.19□□□□□ -1.74
CCDC57-208ENST00000475635 RPS28P62857 69 aaKnown RBP4.18□□□□□ -1.74
CCDC57-208ENST00000475635 KRTAP4-7Q9BYR0 210 aa4.18□□□□□ -1.74
CCDC57-208ENST00000475635 SMIM26A0A096LP01 95 aa4.16□□□□□ -1.74
CCDC57-208ENST00000475635 A8MU10 97 aa4.15□□□□□ -1.75
CCDC57-208ENST00000475635 KRTAP20-2Q3LI61 65 aa4.15□□□□□ -1.75
CCDC57-208ENST00000475635 SPRR5A0A1B0GTR4 108 aa4.1□□□□□ -1.75
CCDC57-208ENST00000475635 A0A1B0GU69 56 aa4.1□□□□□ -1.75
CCDC57-208ENST00000475635 KRTAP12-3P60328 96 aa4.1□□□□□ -1.75
CCDC57-208ENST00000475635 KRTAP5-5Q701N2 237 aaPredicted RBP4.09□□□□□ -1.75
CCDC57-208ENST00000475635 KRTAP12-4P60329 112 aa4.05□□□□□ -1.76
CCDC57-208ENST00000475635 SVIPQ8NHG7 77 aa4□□□□□ -1.77
CCDC57-208ENST00000475635 LOC100996750A0A140TA64 210 aa3.97□□□□□ -1.77
CCDC57-208ENST00000475635 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
CCDC57-208ENST00000475635 Q1T7F1 81 aa3.92□□□□□ -1.78
CCDC57-208ENST00000475635 PRR15LQ9BU68 103 aa3.89□□□□□ -1.79
CCDC57-208ENST00000475635 V9GYY9 64 aa3.89□□□□□ -1.79
CCDC57-208ENST00000475635 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
CCDC57-208ENST00000475635 PRO0628Q9UI54 55 aa3.83□□□□□ -1.8
CCDC57-208ENST00000475635 KRTAP25-1Q3LHN0 102 aa3.82□□□□□ -1.8
CCDC57-208ENST00000475635 KRTAP19-4Q3LI73 84 aa3.82□□□□□ -1.8
CCDC57-208ENST00000475635 PSPHP1O15172 72 aa3.8□□□□□ -1.8
CCDC57-208ENST00000475635 BRK1Q8WUW1 75 aa3.8□□□□□ -1.8
CCDC57-208ENST00000475635 LINC01558Q9Y6Z2 57 aa3.8□□□□□ -1.8
CCDC57-208ENST00000475635 KRTAP5-2Q701N4 177 aa3.79□□□□□ -1.8
CCDC57-208ENST00000475635 UQCR11O14957 56 aa3.76□□□□□ -1.81
CCDC57-208ENST00000475635 AHNAKQ09666 5890 aaKnown RBP3.75□□□□□ -1.81
CCDC57-208ENST00000475635 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
CCDC57-208ENST00000475635 KRTAP5-8O75690 187 aa3.73□□□□□ -1.81
CCDC57-208ENST00000475635 MT1AP04731 61 aa3.73□□□□□ -1.81
CCDC57-208ENST00000475635 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
CCDC57-208ENST00000475635 KRTAP15-1Q3LI76 137 aa3.73□□□□□ -1.81
CCDC57-208ENST00000475635 MUC5ACP98088 5654 aa3.72□□□□□ -1.81
CCDC57-208ENST00000475635 MUC5BQ9HC84 5762 aaPredicted RBP3.72□□□□□ -1.81
CCDC57-208ENST00000475635 CDC42SE1Q9NRR8 79 aa3.7□□□□□ -1.82
CCDC57-208ENST00000475635 A6NED7 52 aa3.69□□□□□ -1.82
CCDC57-208ENST00000475635 KRTAP23-1A1A580 65 aa3.66□□□□□ -1.82
CCDC57-208ENST00000475635 MIR22HGQ0VDD5 57 aa3.65□□□□□ -1.83
CCDC57-208ENST00000475635 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
CCDC57-208ENST00000475635 K7ERS5 55 aa3.63□□□□□ -1.83
CCDC57-208ENST00000475635 KRTAP6-2Q3LI66 62 aa3.61□□□□□ -1.83
CCDC57-208ENST00000475635 OBSCNQ5VST9 7968 aa3.59□□□□□ -1.84
CCDC57-208ENST00000475635 KRTAP9-9Q9BYP9 154 aa3.58□□□□□ -1.84
CCDC57-208ENST00000475635 PMAIP1Q13794 54 aa3.56□□□□□ -1.84
CCDC57-208ENST00000475635 KTN1-AS1Q86SY8 53 aa3.55□□□□□ -1.84
CCDC57-208ENST00000475635 KRTAP9-6A8MVA2 160 aa3.54□□□□□ -1.84
CCDC57-208ENST00000475635 KRTAP5-1Q6L8H4 278 aa3.45□□□□□ -1.86
CCDC57-208ENST00000475635 MT3P25713 68 aa3.42□□□□□ -1.86
CCDC57-208ENST00000475635 PRAC1Q96KF2 57 aa3.35□□□□□ -1.87
CCDC57-208ENST00000475635 ROMO1P60602 79 aa3.33□□□□□ -1.88
CCDC57-208ENST00000475635 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
CCDC57-208ENST00000475635 KRTAP4-2Q9BYR5 136 aa3.06□□□□□ -1.92
CCDC57-208ENST00000475635 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
CCDC57-208ENST00000475635 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
CCDC57-208ENST00000475635 KRTAP4-12Q9BQ66 201 aa2.87□□□□□ -1.95
CCDC57-208ENST00000475635 NDUFAF8A1L188 74 aa2.75□□□□□ -1.97
CCDC57-208ENST00000475635 H3BS24 57 aa2.74□□□□□ -1.97
CCDC57-208ENST00000475635 KRTAP5-11Q6L8G4 156 aa2.72□□□□□ -1.97
CCDC57-208ENST00000475635 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
CCDC57-208ENST00000475635 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
CCDC57-208ENST00000475635 LUZP6Q538Z0 58 aa2.66□□□□□ -1.98
CCDC57-208ENST00000475635 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
CCDC57-208ENST00000475635 PHGR1C9JFL3 82 aa2.57□□□□□ -2
CCDC57-208ENST00000475635 A0A0A0MQY5 61 aa2.46□□□□□ -2.02
CCDC57-208ENST00000475635 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
CCDC57-208ENST00000475635 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
CCDC57-208ENST00000475635 INE1O15225 51 aa2.3□□□□□ -2.04
CCDC57-208ENST00000475635 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
CCDC57-208ENST00000475635 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
CCDC57-208ENST00000475635 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
CCDC57-208ENST00000475635 PRM1P04553 51 aa1.72□□□□□ -2.13
CCDC57-208ENST00000475635 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 129.6 ms