RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 KRTAP20-1Q3LI63 56 aa5.46□□□□□ -1.54
MCF2L-224ENST00000475524 KRTAP19-3Q7Z4W3 81 aa5.46□□□□□ -1.54
MCF2L-224ENST00000475524 MUC12Q9UKN1 5478 aa5.44□□□□□ -1.54
MCF2L-224ENST00000475524 LCE5AQ5TCM9 118 aa5.42□□□□□ -1.54
MCF2L-224ENST00000475524 MT1LQ93083 61 aa5.42□□□□□ -1.54
MCF2L-224ENST00000475524 MT1GP13640 62 aa5.41□□□□□ -1.54
MCF2L-224ENST00000475524 KRTAP19-4Q3LI73 84 aa5.41□□□□□ -1.54
MCF2L-224ENST00000475524 KRTAP15-1Q3LI76 137 aa5.36□□□□□ -1.55
MCF2L-224ENST00000475524 SPRR2DP22532 72 aa5.34□□□□□ -1.55
MCF2L-224ENST00000475524 KTN1-AS1Q86SY8 53 aa5.33□□□□□ -1.56
MCF2L-224ENST00000475524 MDN1Q9NU22 5596 aa5.32□□□□□ -1.56
MCF2L-224ENST00000475524 MT1MQ8N339 61 aa5.29□□□□□ -1.56
MCF2L-224ENST00000475524 KRTAP2-3P0C7H8 128 aa5.26□□□□□ -1.57
MCF2L-224ENST00000475524 PRAC1Q96KF2 57 aa5.26□□□□□ -1.57
MCF2L-224ENST00000475524 KRTAP2-4Q9BYR9 128 aa5.26□□□□□ -1.57
MCF2L-224ENST00000475524 LCE3BQ5TA77 95 aa5.16□□□□□ -1.58
MCF2L-224ENST00000475524 LCE3CQ5T5A8 94 aa5.15□□□□□ -1.59
MCF2L-224ENST00000475524 KRTAP4-7Q9BYR0 210 aa5.1□□□□□ -1.59
MCF2L-224ENST00000475524 KRTAP2-2Q9BYT5 123 aa5.09□□□□□ -1.59
MCF2L-224ENST00000475524 KRTAP2-1Q9BYU5 128 aa5.09□□□□□ -1.59
MCF2L-224ENST00000475524 KRTAP4-3Q9BYR4 195 aa5.06□□□□□ -1.6
MCF2L-224ENST00000475524 SVIPQ8NHG7 77 aa4.98□□□□□ -1.61
MCF2L-224ENST00000475524 DSTQ03001 7570 aaKnown RBP4.92□□□□□ -1.62
MCF2L-224ENST00000475524 KRTAP5-5Q701N2 237 aaPredicted RBP4.83□□□□□ -1.64
MCF2L-224ENST00000475524 SPRR5A0A1B0GTR4 108 aa4.82□□□□□ -1.64
MCF2L-224ENST00000475524 KRTAP9-6A8MVA2 160 aa4.81□□□□□ -1.64
MCF2L-224ENST00000475524 LCE4AQ5TA78 99 aa4.81□□□□□ -1.64
MCF2L-224ENST00000475524 LOC100996750A0A140TA64 210 aa4.8□□□□□ -1.64
MCF2L-224ENST00000475524 KRTAP5-4Q6L8H1 288 aa4.8□□□□□ -1.64
MCF2L-224ENST00000475524 GPR98Q8WXG9 6306 aa4.71□□□□□ -1.66
MCF2L-224ENST00000475524 MT1AP04731 61 aa4.65□□□□□ -1.67
MCF2L-224ENST00000475524 LCE1DQ5T752 114 aa4.61□□□□□ -1.67
MCF2L-224ENST00000475524 KRTAP4-9Q9BYQ8 210 aa4.6□□□□□ -1.67
MCF2L-224ENST00000475524 KRTAP12-4P60329 112 aa4.59□□□□□ -1.67
MCF2L-224ENST00000475524 MT4P47944 62 aa4.58□□□□□ -1.68
MCF2L-224ENST00000475524 KRTAP6-1Q3LI64 71 aa4.54□□□□□ -1.68
MCF2L-224ENST00000475524 KRTAP4-6Q9BYQ5 205 aa4.52□□□□□ -1.69
MCF2L-224ENST00000475524 KRTAP20-2Q3LI61 65 aa4.47□□□□□ -1.69
MCF2L-224ENST00000475524 LUZP6Q538Z0 58 aa4.46□□□□□ -1.7
MCF2L-224ENST00000475524 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
MCF2L-224ENST00000475524 SYNE1Q8NF91 8797 aaKnown RBP4.41□□□□□ -1.7
MCF2L-224ENST00000475524 HMCN1Q96RW7 5635 aa4.39□□□□□ -1.71
MCF2L-224ENST00000475524 KRTAP5-3Q6L8H2 238 aa4.33□□□□□ -1.72
MCF2L-224ENST00000475524 KRTAP5-2Q701N4 177 aa4.29□□□□□ -1.72
MCF2L-224ENST00000475524 AHNAK2Q8IVF2 5795 aa4.26□□□□□ -1.73
MCF2L-224ENST00000475524 KRTAP6-2Q3LI66 62 aa4.24□□□□□ -1.73
MCF2L-224ENST00000475524 MT3P25713 68 aa4.23□□□□□ -1.73
MCF2L-224ENST00000475524 KRTAP5-10Q6L8G5 202 aa4.22□□□□□ -1.73
MCF2L-224ENST00000475524 KRTAP5-7Q6L8G8 165 aa4.13□□□□□ -1.75
MCF2L-224ENST00000475524 NDUFAF8A1L188 74 aa4□□□□□ -1.77
MCF2L-224ENST00000475524 KRTAP4-11Q9BYQ6 195 aa3.96□□□□□ -1.78
MCF2L-224ENST00000475524 KRTAP5-8O75690 187 aa3.82□□□□□ -1.8
MCF2L-224ENST00000475524 LCE3DQ9BYE3 92 aa3.82□□□□□ -1.8
MCF2L-224ENST00000475524 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
MCF2L-224ENST00000475524 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
MCF2L-224ENST00000475524 KRTAP5-1Q6L8H4 278 aa3.74□□□□□ -1.81
MCF2L-224ENST00000475524 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
MCF2L-224ENST00000475524 AHNAKQ09666 5890 aaKnown RBP3.63□□□□□ -1.83
MCF2L-224ENST00000475524 MUC5BQ9HC84 5762 aaPredicted RBP3.61□□□□□ -1.83
MCF2L-224ENST00000475524 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
MCF2L-224ENST00000475524 KRTAP9-9Q9BYP9 154 aa3.54□□□□□ -1.84
MCF2L-224ENST00000475524 LCE1CQ5T751 118 aa3.52□□□□□ -1.85
MCF2L-224ENST00000475524 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
MCF2L-224ENST00000475524 KRTAP4-2Q9BYR5 136 aa3.51□□□□□ -1.85
MCF2L-224ENST00000475524 A0A0A0MQY5 61 aa3.49□□□□□ -1.85
MCF2L-224ENST00000475524 INE1O15225 51 aa3.4□□□□□ -1.87
MCF2L-224ENST00000475524 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
MCF2L-224ENST00000475524 KRTAP5-11Q6L8G4 156 aa3.15□□□□□ -1.91
MCF2L-224ENST00000475524 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
MCF2L-224ENST00000475524 PRM1P04553 51 aa2.99□□□□□ -1.93
MCF2L-224ENST00000475524 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
MCF2L-224ENST00000475524 KRTAP4-12Q9BQ66 201 aa2.91□□□□□ -1.94
MCF2L-224ENST00000475524 H3BS24 57 aa2.81□□□□□ -1.96
MCF2L-224ENST00000475524 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
MCF2L-224ENST00000475524 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
MCF2L-224ENST00000475524 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
MCF2L-224ENST00000475524 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
MCF2L-224ENST00000475524 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 105.3 ms