RNA–Protein interactions for RNA: ENST00000475060.1

CTPS1-207, Transcript of CTP synthase 1, humanhuman

TSL 5

Gene CTPS1, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-207ENST00000475060 NDUFAF8A1L188 74 aa2.57□□□□□ -2
CTPS1-207ENST00000475060 KRTAP10-12P60413 245 aa2.56□□□□□ -2
CTPS1-207ENST00000475060 KRTAP10-7P60409 375 aaPredicted RBP2.52□□□□□ -2.01
CTPS1-207ENST00000475060 LUZP6Q538Z0 58 aa2.51□□□□□ -2.01
CTPS1-207ENST00000475060 KRTAP2-2Q9BYT5 123 aa2.51□□□□□ -2.01
CTPS1-207ENST00000475060 KRTAP12-3P60328 96 aa2.5□□□□□ -2.01
CTPS1-207ENST00000475060 USH2AO75445 5202 aa2.47□□□□□ -2.01
CTPS1-207ENST00000475060 KRTAP19-6Q3LI70 58 aa2.43□□□□□ -2.02
CTPS1-207ENST00000475060 KRTAP19-5Q3LI72 72 aa2.4□□□□□ -2.03
CTPS1-207ENST00000475060 MT3P25713 68 aa2.39□□□□□ -2.03
CTPS1-207ENST00000475060 KRTAP19-7Q3SYF9 63 aa2.39□□□□□ -2.03
CTPS1-207ENST00000475060 SSPOA2VEC9 5147 aa2.37□□□□□ -2.03
CTPS1-207ENST00000475060 LCE3CQ5T5A8 94 aa2.36□□□□□ -2.03
CTPS1-207ENST00000475060 MT1EP04732 61 aa2.33□□□□□ -2.04
CTPS1-207ENST00000475060 MT1LQ93083 61 aa2.3□□□□□ -2.04
CTPS1-207ENST00000475060 KMT2DO14686 5537 aa2.27□□□□□ -2.05
CTPS1-207ENST00000475060 LCE1FQ5T754 118 aa2.26□□□□□ -2.05
CTPS1-207ENST00000475060 KRTAP9-6A8MVA2 160 aa2.25□□□□□ -2.05
CTPS1-207ENST00000475060 INE1O15225 51 aa2.22□□□□□ -2.05
CTPS1-207ENST00000475060 KRTAP2-3P0C7H8 128 aa2.22□□□□□ -2.05
CTPS1-207ENST00000475060 KRTAP2-4Q9BYR9 128 aa2.22□□□□□ -2.05
CTPS1-207ENST00000475060 KRTAP2-1Q9BYU5 128 aa2.22□□□□□ -2.05
CTPS1-207ENST00000475060 LCE1EQ5T753 118 aa2.21□□□□□ -2.06
CTPS1-207ENST00000475060 KRTAP5-11Q6L8G4 156 aa2.21□□□□□ -2.06
CTPS1-207ENST00000475060 MT1GP13640 62 aa2.2□□□□□ -2.06
CTPS1-207ENST00000475060 KRTAP19-3Q7Z4W3 81 aa2.2□□□□□ -2.06
CTPS1-207ENST00000475060 FCGBPQ9Y6R7 5405 aaPredicted RBP2.19□□□□□ -2.06
CTPS1-207ENST00000475060 MT1MQ8N339 61 aa2.17□□□□□ -2.06
CTPS1-207ENST00000475060 FSIP2Q5CZC0 6907 aa2.14□□□□□ -2.07
CTPS1-207ENST00000475060 KRTAP5-9P26371 169 aa2.13□□□□□ -2.07
CTPS1-207ENST00000475060 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.09□□□□□ -2.07
CTPS1-207ENST00000475060 SPRR2FQ96RM1 72 aa2.07□□□□□ -2.08
CTPS1-207ENST00000475060 KRTAP4-3Q9BYR4 195 aa2.07□□□□□ -2.08
CTPS1-207ENST00000475060 MACF1Q9UPN3 7388 aaKnown RBP2.07□□□□□ -2.08
CTPS1-207ENST00000475060 CRCT1Q9UGL9 99 aa2.05□□□□□ -2.08
CTPS1-207ENST00000475060 MUC12Q9UKN1 5478 aa2.04□□□□□ -2.08
CTPS1-207ENST00000475060 SYNE2Q8WXH0 6885 aaKnown RBP2□□□□□ -2.09
CTPS1-207ENST00000475060 KRTAP5-5Q701N2 237 aaPredicted RBP2□□□□□ -2.09
CTPS1-207ENST00000475060 MT1AP04731 61 aa1.98□□□□□ -2.09
CTPS1-207ENST00000475060 KRTAP6-3Q3LI67 103 aa1.97□□□□□ -2.09
CTPS1-207ENST00000475060 LCE3EQ5T5B0 92 aa1.93□□□□□ -2.1
CTPS1-207ENST00000475060 SPRR2EP22531 72 aa1.92□□□□□ -2.1
CTPS1-207ENST00000475060 SPRR2BP35325 72 aa1.92□□□□□ -2.1
CTPS1-207ENST00000475060 SPRR2AP35326 72 aa1.92□□□□□ -2.1
CTPS1-207ENST00000475060 KRTAP6-1Q3LI64 71 aa1.91□□□□□ -2.1
CTPS1-207ENST00000475060 MDN1Q9NU22 5596 aa1.9□□□□□ -2.11
CTPS1-207ENST00000475060 GPR98Q8WXG9 6306 aa1.89□□□□□ -2.11
CTPS1-207ENST00000475060 DSTQ03001 7570 aaKnown RBP1.88□□□□□ -2.11
CTPS1-207ENST00000475060 SYNE1Q8NF91 8797 aaKnown RBP1.87□□□□□ -2.11
CTPS1-207ENST00000475060 NEBP20929 6669 aa1.86□□□□□ -2.11
CTPS1-207ENST00000475060 SPRR2DP22532 72 aa1.85□□□□□ -2.11
CTPS1-207ENST00000475060 KRTAP5-1Q6L8H4 278 aa1.84□□□□□ -2.11
CTPS1-207ENST00000475060 KRTAP12-4P60329 112 aa1.83□□□□□ -2.12
CTPS1-207ENST00000475060 KRTAP5-4Q6L8H1 288 aa1.83□□□□□ -2.12
CTPS1-207ENST00000475060 LCE3DQ9BYE3 92 aa1.79□□□□□ -2.12
CTPS1-207ENST00000475060 KRTAP4-4Q9BYR3 166 aa1.76□□□□□ -2.13
CTPS1-207ENST00000475060 KRTAP6-2Q3LI66 62 aa1.71□□□□□ -2.14
CTPS1-207ENST00000475060 KRTAP5-2Q701N4 177 aa1.7□□□□□ -2.14
CTPS1-207ENST00000475060 OBSCNQ5VST9 7968 aa1.66□□□□□ -2.14
CTPS1-207ENST00000475060 KRTAP20-2Q3LI61 65 aa1.65□□□□□ -2.15
CTPS1-207ENST00000475060 KRTAP20-1Q3LI63 56 aa1.63□□□□□ -2.15
CTPS1-207ENST00000475060 PRM1P04553 51 aa1.59□□□□□ -2.15
CTPS1-207ENST00000475060 AHNAK2Q8IVF2 5795 aa1.59□□□□□ -2.16
CTPS1-207ENST00000475060 MT4P47944 62 aa1.56□□□□□ -2.16
CTPS1-207ENST00000475060 HMCN1Q96RW7 5635 aa1.54□□□□□ -2.16
CTPS1-207ENST00000475060 MUC5BQ9HC84 5762 aaPredicted RBP1.49□□□□□ -2.17
CTPS1-207ENST00000475060 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
CTPS1-207ENST00000475060 KRTAP5-10Q6L8G5 202 aa1.47□□□□□ -2.17
CTPS1-207ENST00000475060 LCE1CQ5T751 118 aa1.45□□□□□ -2.18
CTPS1-207ENST00000475060 LCE1BQ5T7P3 118 aa1.45□□□□□ -2.18
CTPS1-207ENST00000475060 KRTAP5-8O75690 187 aa1.42□□□□□ -2.18
CTPS1-207ENST00000475060 MUC5ACP98088 5654 aa1.42□□□□□ -2.18
CTPS1-207ENST00000475060 KRTAP5-7Q6L8G8 165 aa1.41□□□□□ -2.18
CTPS1-207ENST00000475060 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
CTPS1-207ENST00000475060 MUC19Q7Z5P9 8384 aa1.17□□□□□ -2.22
CTPS1-207ENST00000475060 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
CTPS1-207ENST00000475060 PHGR1C9JFL3 82 aa1.06□□□□□ -2.24
CTPS1-207ENST00000475060 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 36.3 ms