RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 RYR1P21817 5038 aa0.07□□□□□ -2.4
HDAC9-222ENST00000474742 KIAA1109Q2LD37 5005 aa0.07□□□□□ -2.4
HDAC9-222ENST00000474742 DNAH8Q96JB1 4490 aa0.07□□□□□ -2.4
HDAC9-222ENST00000474742 SPTBN5Q9NRC6 3674 aaKnown RBP0.07□□□□□ -2.4
HDAC9-222ENST00000474742 SVEP1Q4LDE5 3571 aa0.06□□□□□ -2.4
HDAC9-222ENST00000474742 RYR3Q15413 4870 aa0.06□□□□□ -2.4
HDAC9-222ENST00000474742 RELNP78509 3460 aa0.06□□□□□ -2.4
HDAC9-222ENST00000474742 SACSQ9NZJ4 4579 aa0.06□□□□□ -2.4
HDAC9-222ENST00000474742 ZFHX4Q86UP3 3567 aa0.06□□□□□ -2.4
HDAC9-222ENST00000474742 ABCA13Q86UQ4 5058 aa0.06□□□□□ -2.4
HDAC9-222ENST00000474742 MT1XP80297 61 aa0.06□□□□□ -2.4
HDAC9-222ENST00000474742 LRP2P98164 4655 aa0.06□□□□□ -2.4
HDAC9-222ENST00000474742 KRTAP6-1Q3LI64 71 aa0.06□□□□□ -2.4
HDAC9-222ENST00000474742 KRTAP19-5Q3LI72 72 aa0.06□□□□□ -2.4
HDAC9-222ENST00000474742 VPS13DQ5THJ4 4388 aa0.06□□□□□ -2.4
HDAC9-222ENST00000474742 HERC2O95714 4834 aa0.06□□□□□ -2.4
HDAC9-222ENST00000474742 BOD1L1Q8NFC6 3051 aa0.06□□□□□ -2.4
HDAC9-222ENST00000474742 CEP350Q5VT06 3117 aa0.06□□□□□ -2.4
HDAC9-222ENST00000474742 TRRAPQ9Y4A5 3859 aa0.06□□□□□ -2.4
HDAC9-222ENST00000474742 LRP1BQ9NZR2 4599 aa0.06□□□□□ -2.4
HDAC9-222ENST00000474742 RYR2Q92736 4967 aa0.05□□□□□ -2.4
HDAC9-222ENST00000474742 CSMD1Q96PZ7 3565 aa0.05□□□□□ -2.4
HDAC9-222ENST00000474742 HYDINQ4G0P3 5121 aa0.05□□□□□ -2.4
HDAC9-222ENST00000474742 MUC12Q9UKN1 5478 aa0.05□□□□□ -2.4
HDAC9-222ENST00000474742 DNHD1Q96M86 4753 aa0.05□□□□□ -2.4
HDAC9-222ENST00000474742 CSMD2Q7Z408 3487 aa0.05□□□□□ -2.4
HDAC9-222ENST00000474742 HERC1Q15751 4861 aa0.05□□□□□ -2.4
HDAC9-222ENST00000474742 MKI67P46013 3256 aaKnown RBP0.05□□□□□ -2.4
HDAC9-222ENST00000474742 HMCN2Q8NDA2 5059 aa0.05□□□□□ -2.4
HDAC9-222ENST00000474742 MYO15AQ9UKN7 3530 aa0.04□□□□□ -2.4
HDAC9-222ENST00000474742 FAT3Q8TDW7 4589 aa0.04□□□□□ -2.4
HDAC9-222ENST00000474742 SPENQ96T58 3664 aaKnown RBP0.04□□□□□ -2.4
HDAC9-222ENST00000474742 RNF213Q63HN8 5207 aa0.04□□□□□ -2.4
HDAC9-222ENST00000474742 MT2AP02795 61 aa0.04□□□□□ -2.4
HDAC9-222ENST00000474742 USH2AO75445 5202 aa0.04□□□□□ -2.4
HDAC9-222ENST00000474742 PCNTO95613 3336 aa0.04□□□□□ -2.4
HDAC9-222ENST00000474742 FAT1Q14517 4588 aa0.04□□□□□ -2.4
HDAC9-222ENST00000474742 WDFY4Q6ZS81 3184 aa0.04□□□□□ -2.4
HDAC9-222ENST00000474742 DMDP11532 3685 aa0.03□□□□□ -2.4
HDAC9-222ENST00000474742 SMG1Q96Q15 3661 aaKnown RBP0.03□□□□□ -2.4
HDAC9-222ENST00000474742 SZT2Q5T011 3432 aa0.03□□□□□ -2.4
HDAC9-222ENST00000474742 MT1GP13640 62 aa0.03□□□□□ -2.4
HDAC9-222ENST00000474742 MT4P47944 62 aa0.03□□□□□ -2.4
HDAC9-222ENST00000474742 KRTAP20-2Q3LI61 65 aa0.03□□□□□ -2.4
HDAC9-222ENST00000474742 MT1MQ8N339 61 aa0.03□□□□□ -2.4
HDAC9-222ENST00000474742 BIRC6Q9NR09 4857 aa0.03□□□□□ -2.4
HDAC9-222ENST00000474742 CFAP47Q6ZTR5 3102 aa0.03□□□□□ -2.4
HDAC9-222ENST00000474742 APOBP04114 4563 aaKnown RBP0.03□□□□□ -2.4
HDAC9-222ENST00000474742 MUC17Q685J3 4493 aa0.03□□□□□ -2.41
HDAC9-222ENST00000474742 DNAH17Q9UFH2 4485 aa0.03□□□□□ -2.41
HDAC9-222ENST00000474742 PLECQ15149 4684 aaKnown RBP0.02□□□□□ -2.41
HDAC9-222ENST00000474742 EP400Q96L91 3159 aa0.02□□□□□ -2.41
HDAC9-222ENST00000474742 LOC400499M0QZD8 3231 aa0.02□□□□□ -2.41
HDAC9-222ENST00000474742 DNAH10Q8IVF4 4471 aa0.02□□□□□ -2.41
HDAC9-222ENST00000474742 DYNC1H1Q14204 4646 aaKnown RBP0.02□□□□□ -2.41
HDAC9-222ENST00000474742 VPS13CQ709C8 3753 aa0.02□□□□□ -2.41
HDAC9-222ENST00000474742 SPEGQ15772 3267 aa0.02□□□□□ -2.41
HDAC9-222ENST00000474742 DCHS1Q96JQ0 3298 aa0.02□□□□□ -2.41
HDAC9-222ENST00000474742 XIRP2A4UGR9 3374 aa0.02□□□□□ -2.41
HDAC9-222ENST00000474742 STARD9Q9P2P6 4700 aa0.02□□□□□ -2.41
HDAC9-222ENST00000474742 MT1BP07438 61 aa0.01□□□□□ -2.41
HDAC9-222ENST00000474742 DNAH5Q8TE73 4624 aa0.01□□□□□ -2.41
HDAC9-222ENST00000474742 UNC80Q8N2C7 3258 aa0.01□□□□□ -2.41
HDAC9-222ENST00000474742 MT1FP04733 61 aa0□□□□□ -2.41
HDAC9-222ENST00000474742 KRTAP20-1Q3LI63 56 aa0□□□□□ -2.41
HDAC9-222ENST00000474742 USP34Q70CQ2 3546 aa0□□□□□ -2.41
HDAC9-222ENST00000474742 VPS13AQ96RL7 3174 aa0□□□□□ -2.41
HDAC9-222ENST00000474742 CENPFP49454 3210 aa-0□□□□□ -2.41
HDAC9-222ENST00000474742 ASPMQ8IZT6 3477 aa-0.01□□□□□ -2.41
HDAC9-222ENST00000474742 VCANP13611 3396 aa-0.02□□□□□ -2.41
HDAC9-222ENST00000474742 GOLGB1Q14789 3259 aaKnown RBP-0.02□□□□□ -2.41
HDAC9-222ENST00000474742 WDFY3Q8IZQ1 3526 aa-0.03□□□□□ -2.41
HDAC9-222ENST00000474742 BRCA2P51587 3418 aa-0.03□□□□□ -2.41
HDAC9-222ENST00000474742 CDH23Q9H251 3354 aa-0.03□□□□□ -2.41
HDAC9-222ENST00000474742 UTRNP46939 3433 aa-0.03□□□□□ -2.41
HDAC9-222ENST00000474742 DNAH14Q0VDD8 3507 aa-0.05□□□□□ -2.42
HDAC9-222ENST00000474742 KRTAP19-6Q3LI70 58 aa-0.09□□□□□ -2.42
HDAC9-222ENST00000474742 KRTAP19-2Q3LHN2 52 aa-0.1□□□□□ -2.43
Retrieved 78 of 20,778 RNA–protein pairs in 63.8 ms