RNA–Protein interactions for RNA: ENST00000474116.5

CUL4A-208, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-208ENST00000474116 SPINT4Q6UDR6 99 aa6.08□□□□□ -1.44
CUL4A-208ENST00000474116 ATP5EP56381 51 aaPredicted RBP6.06□□□□□ -1.44
CUL4A-208ENST00000474116 KRTAP12-1P59990 96 aa6.03□□□□□ -1.44
CUL4A-208ENST00000474116 SMIM26A0A096LP01 95 aa6□□□□□ -1.45
CUL4A-208ENST00000474116 A8MU10 97 aa5.97□□□□□ -1.45
CUL4A-208ENST00000474116 SPRR5A0A1B0GTR4 108 aa5.95□□□□□ -1.46
CUL4A-208ENST00000474116 TMEM258P61165 79 aa5.95□□□□□ -1.46
CUL4A-208ENST00000474116 KRTAP20-2Q3LI61 65 aa5.95□□□□□ -1.46
CUL4A-208ENST00000474116 PRR15LQ9BU68 103 aa5.95□□□□□ -1.46
CUL4A-208ENST00000474116 LINC01558Q9Y6Z2 57 aa5.94□□□□□ -1.46
CUL4A-208ENST00000474116 C10orf95Q9H7T3 257 aa5.85□□□□□ -1.47
CUL4A-208ENST00000474116 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
CUL4A-208ENST00000474116 LCE3AQ5TA76 89 aa5.81□□□□□ -1.48
CUL4A-208ENST00000474116 KRTAP5-5Q701N2 237 aaPredicted RBP5.8□□□□□ -1.48
CUL4A-208ENST00000474116 UQCR11O14957 56 aa5.76□□□□□ -1.49
CUL4A-208ENST00000474116 KRTAP12-4P60329 112 aa5.73□□□□□ -1.49
CUL4A-208ENST00000474116 TNP1P09430 55 aa5.72□□□□□ -1.49
CUL4A-208ENST00000474116 MIR22HGQ0VDD5 57 aa5.65□□□□□ -1.5
CUL4A-208ENST00000474116 V9GYY9 64 aa5.63□□□□□ -1.51
CUL4A-208ENST00000474116 PSPHP1O15172 72 aa5.61□□□□□ -1.51
CUL4A-208ENST00000474116 SYNE1Q8NF91 8797 aaKnown RBP5.6□□□□□ -1.51
CUL4A-208ENST00000474116 Q1T7F1 81 aa5.6□□□□□ -1.51
CUL4A-208ENST00000474116 KRTAP12-3P60328 96 aa5.57□□□□□ -1.52
CUL4A-208ENST00000474116 KRTAP4-11Q9BYQ6 195 aa5.56□□□□□ -1.52
CUL4A-208ENST00000474116 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
CUL4A-208ENST00000474116 K7ERS5 55 aa5.51□□□□□ -1.53
CUL4A-208ENST00000474116 AHNAKQ09666 5890 aaKnown RBP5.49□□□□□ -1.53
CUL4A-208ENST00000474116 MUC5ACP98088 5654 aa5.44□□□□□ -1.54
CUL4A-208ENST00000474116 KRTAP25-1Q3LHN0 102 aa5.44□□□□□ -1.54
CUL4A-208ENST00000474116 KRTAP5-2Q701N4 177 aa5.42□□□□□ -1.54
CUL4A-208ENST00000474116 A6NED7 52 aa5.41□□□□□ -1.54
CUL4A-208ENST00000474116 KRTAP5-8O75690 187 aa5.41□□□□□ -1.54
CUL4A-208ENST00000474116 PCP4P48539 62 aa5.41□□□□□ -1.54
CUL4A-208ENST00000474116 RPS28P62857 69 aaKnown RBP5.4□□□□□ -1.54
CUL4A-208ENST00000474116 MUC5BQ9HC84 5762 aaPredicted RBP5.39□□□□□ -1.55
CUL4A-208ENST00000474116 KRTAP23-1A1A580 65 aa5.25□□□□□ -1.57
CUL4A-208ENST00000474116 KRTAP19-4Q3LI73 84 aa5.23□□□□□ -1.57
CUL4A-208ENST00000474116 CDC42SE1Q9NRR8 79 aa5.23□□□□□ -1.57
CUL4A-208ENST00000474116 KRTAP6-1Q3LI64 71 aa5.22□□□□□ -1.57
CUL4A-208ENST00000474116 MT1AP04731 61 aa5.2□□□□□ -1.58
CUL4A-208ENST00000474116 KRTAP9-9Q9BYP9 154 aa5.18□□□□□ -1.58
CUL4A-208ENST00000474116 ROMO1P60602 79 aa5.17□□□□□ -1.58
CUL4A-208ENST00000474116 KRTAP15-1Q3LI76 137 aa5.12□□□□□ -1.59
CUL4A-208ENST00000474116 OBSCNQ5VST9 7968 aa5.11□□□□□ -1.59
CUL4A-208ENST00000474116 KRTAP9-4Q9BYQ2 154 aa5.1□□□□□ -1.59
CUL4A-208ENST00000474116 LCE3CQ5T5A8 94 aa5.09□□□□□ -1.59
CUL4A-208ENST00000474116 KRTAP6-2Q3LI66 62 aa5.08□□□□□ -1.6
CUL4A-208ENST00000474116 KRTAP5-1Q6L8H4 278 aa4.95□□□□□ -1.62
CUL4A-208ENST00000474116 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
CUL4A-208ENST00000474116 MT3P25713 68 aa4.77□□□□□ -1.65
CUL4A-208ENST00000474116 BRK1Q8WUW1 75 aa4.74□□□□□ -1.65
CUL4A-208ENST00000474116 H3BS24 57 aa4.71□□□□□ -1.66
CUL4A-208ENST00000474116 SVIPQ8NHG7 77 aa4.7□□□□□ -1.66
CUL4A-208ENST00000474116 KRTAP4-12Q9BQ66 201 aa4.66□□□□□ -1.66
CUL4A-208ENST00000474116 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
CUL4A-208ENST00000474116 PMAIP1Q13794 54 aa4.47□□□□□ -1.69
CUL4A-208ENST00000474116 KRTAP4-2Q9BYR5 136 aa4.35□□□□□ -1.71
CUL4A-208ENST00000474116 PRAC1Q96KF2 57 aa4.3□□□□□ -1.72
CUL4A-208ENST00000474116 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
CUL4A-208ENST00000474116 LCE1CQ5T751 118 aa4.21□□□□□ -1.74
CUL4A-208ENST00000474116 PRO0628Q9UI54 55 aa4.18□□□□□ -1.74
CUL4A-208ENST00000474116 KTN1-AS1Q86SY8 53 aa3.98□□□□□ -1.77
CUL4A-208ENST00000474116 KRTAP5-11Q6L8G4 156 aa3.94□□□□□ -1.78
CUL4A-208ENST00000474116 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
CUL4A-208ENST00000474116 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.77□□□□□ -1.81
CUL4A-208ENST00000474116 PHGR1C9JFL3 82 aa3.75□□□□□ -1.81
CUL4A-208ENST00000474116 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
CUL4A-208ENST00000474116 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
CUL4A-208ENST00000474116 KRTAP21-2Q3LI59 83 aa3.46□□□□□ -1.86
CUL4A-208ENST00000474116 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
CUL4A-208ENST00000474116 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
CUL4A-208ENST00000474116 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
CUL4A-208ENST00000474116 NDUFAF8A1L188 74 aa2.98□□□□□ -1.93
CUL4A-208ENST00000474116 A0A0A0MQY5 61 aa2.9□□□□□ -1.95
CUL4A-208ENST00000474116 KRTAP21-1Q3LI58 79 aa2.85□□□□□ -1.95
CUL4A-208ENST00000474116 PRM1P04553 51 aa2.65□□□□□ -1.99
CUL4A-208ENST00000474116 INE1O15225 51 aa2.54□□□□□ -2
CUL4A-208ENST00000474116 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms