RNA–Protein interactions for RNA: ENST00000473943.1

PHF20-209, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-209ENST00000473943 LCE3AQ5TA76 89 aa4.89□□□□□ -1.63
PHF20-209ENST00000473943 C10orf95Q9H7T3 257 aa4.89□□□□□ -1.63
PHF20-209ENST00000473943 MT4P47944 62 aa4.87□□□□□ -1.63
PHF20-209ENST00000473943 PRR15LQ9BU68 103 aa4.84□□□□□ -1.63
PHF20-209ENST00000473943 KRTAP4-3Q9BYR4 195 aa4.82□□□□□ -1.64
PHF20-209ENST00000473943 AHNAK2Q8IVF2 5795 aa4.82□□□□□ -1.64
PHF20-209ENST00000473943 LINC01558Q9Y6Z2 57 aa4.78□□□□□ -1.64
PHF20-209ENST00000473943 KRTAP5-4Q6L8H1 288 aa4.76□□□□□ -1.65
PHF20-209ENST00000473943 KRTAP12-3P60328 96 aa4.72□□□□□ -1.65
PHF20-209ENST00000473943 KRTAP4-6Q9BYQ5 205 aa4.71□□□□□ -1.66
PHF20-209ENST00000473943 RPS28P62857 69 aaKnown RBP4.69□□□□□ -1.66
PHF20-209ENST00000473943 KRTAP5-10Q6L8G5 202 aa4.68□□□□□ -1.66
PHF20-209ENST00000473943 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
PHF20-209ENST00000473943 Q1T7F1 81 aa4.67□□□□□ -1.66
PHF20-209ENST00000473943 V9GYY9 64 aa4.66□□□□□ -1.66
PHF20-209ENST00000473943 UQCR11O14957 56 aa4.65□□□□□ -1.67
PHF20-209ENST00000473943 PSPHP1O15172 72 aa4.56□□□□□ -1.68
PHF20-209ENST00000473943 KRTAP25-1Q3LHN0 102 aa4.56□□□□□ -1.68
PHF20-209ENST00000473943 KRTAP5-7Q6L8G8 165 aa4.54□□□□□ -1.68
PHF20-209ENST00000473943 MIR22HGQ0VDD5 57 aa4.53□□□□□ -1.68
PHF20-209ENST00000473943 KRTAP5-5Q701N2 237 aaPredicted RBP4.52□□□□□ -1.69
PHF20-209ENST00000473943 K7ERS5 55 aa4.51□□□□□ -1.69
PHF20-209ENST00000473943 KRTAP20-2Q3LI61 65 aa4.51□□□□□ -1.69
PHF20-209ENST00000473943 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
PHF20-209ENST00000473943 KRTAP5-3Q6L8H2 238 aa4.5□□□□□ -1.69
PHF20-209ENST00000473943 SPRR5A0A1B0GTR4 108 aa4.49□□□□□ -1.69
PHF20-209ENST00000473943 KRTAP19-4Q3LI73 84 aa4.45□□□□□ -1.7
PHF20-209ENST00000473943 LOC100996750A0A140TA64 210 aa4.44□□□□□ -1.7
PHF20-209ENST00000473943 A6NED7 52 aa4.43□□□□□ -1.7
PHF20-209ENST00000473943 KRTAP23-1A1A580 65 aa4.38□□□□□ -1.71
PHF20-209ENST00000473943 SYNE1Q8NF91 8797 aaKnown RBP4.38□□□□□ -1.71
PHF20-209ENST00000473943 KRTAP15-1Q3LI76 137 aa4.37□□□□□ -1.71
PHF20-209ENST00000473943 LCE3CQ5T5A8 94 aa4.33□□□□□ -1.72
PHF20-209ENST00000473943 CDC42SE1Q9NRR8 79 aa4.33□□□□□ -1.72
PHF20-209ENST00000473943 SVIPQ8NHG7 77 aa4.2□□□□□ -1.74
PHF20-209ENST00000473943 MT1AP04731 61 aa4.19□□□□□ -1.74
PHF20-209ENST00000473943 KRTAP6-1Q3LI64 71 aa4.17□□□□□ -1.74
PHF20-209ENST00000473943 KRTAP4-11Q9BYQ6 195 aa4.16□□□□□ -1.74
PHF20-209ENST00000473943 ROMO1P60602 79 aa4.15□□□□□ -1.75
PHF20-209ENST00000473943 KRTAP5-2Q701N4 177 aa4.15□□□□□ -1.75
PHF20-209ENST00000473943 BRK1Q8WUW1 75 aa4.12□□□□□ -1.75
PHF20-209ENST00000473943 KRTAP9-4Q9BYQ2 154 aa4.08□□□□□ -1.76
PHF20-209ENST00000473943 KRTAP9-6A8MVA2 160 aa4.05□□□□□ -1.76
PHF20-209ENST00000473943 AHNAKQ09666 5890 aaKnown RBP4.05□□□□□ -1.76
PHF20-209ENST00000473943 KRTAP6-2Q3LI66 62 aa4.02□□□□□ -1.77
PHF20-209ENST00000473943 KRTAP5-8O75690 187 aa4□□□□□ -1.77
PHF20-209ENST00000473943 MUC5BQ9HC84 5762 aaPredicted RBP4□□□□□ -1.77
PHF20-209ENST00000473943 MUC5ACP98088 5654 aa3.98□□□□□ -1.77
PHF20-209ENST00000473943 OBSCNQ5VST9 7968 aa3.95□□□□□ -1.78
PHF20-209ENST00000473943 PMAIP1Q13794 54 aa3.88□□□□□ -1.79
PHF20-209ENST00000473943 PRO0628Q9UI54 55 aa3.88□□□□□ -1.79
PHF20-209ENST00000473943 MT3P25713 68 aa3.87□□□□□ -1.79
PHF20-209ENST00000473943 KRTAP9-9Q9BYP9 154 aa3.86□□□□□ -1.79
PHF20-209ENST00000473943 KRTAP5-1Q6L8H4 278 aa3.74□□□□□ -1.81
PHF20-209ENST00000473943 PRAC1Q96KF2 57 aa3.69□□□□□ -1.82
PHF20-209ENST00000473943 KTN1-AS1Q86SY8 53 aa3.65□□□□□ -1.83
PHF20-209ENST00000473943 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
PHF20-209ENST00000473943 LCE1BQ5T7P3 118 aa3.39□□□□□ -1.87
PHF20-209ENST00000473943 KRTAP4-2Q9BYR5 136 aa3.36□□□□□ -1.87
PHF20-209ENST00000473943 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
PHF20-209ENST00000473943 KRTAP4-12Q9BQ66 201 aa3.11□□□□□ -1.91
PHF20-209ENST00000473943 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
PHF20-209ENST00000473943 LUZP6Q538Z0 58 aa3.03□□□□□ -1.92
PHF20-209ENST00000473943 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
PHF20-209ENST00000473943 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.98□□□□□ -1.93
PHF20-209ENST00000473943 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
PHF20-209ENST00000473943 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
PHF20-209ENST00000473943 H3BS24 57 aa2.84□□□□□ -1.95
PHF20-209ENST00000473943 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
PHF20-209ENST00000473943 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
PHF20-209ENST00000473943 NDUFAF8A1L188 74 aa2.72□□□□□ -1.97
PHF20-209ENST00000473943 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
PHF20-209ENST00000473943 A0A0A0MQY5 61 aa2.49□□□□□ -2.01
PHF20-209ENST00000473943 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
PHF20-209ENST00000473943 INE1O15225 51 aa2.26□□□□□ -2.05
PHF20-209ENST00000473943 PRM1P04553 51 aa2.12□□□□□ -2.07
PHF20-209ENST00000473943 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
PHF20-209ENST00000473943 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 31.9 ms