RNA–Protein interactions for RNA: ENST00000473869.5

TARDBP-206, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,946 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-206ENST00000473869 A0A0A0MQY5 61 aa4.25□□□□□ -1.73
TARDBP-206ENST00000473869 LCE3AQ5TA76 89 aa4.25□□□□□ -1.73
TARDBP-206ENST00000473869 MACF1Q9UPN3 7388 aaKnown RBP4.22□□□□□ -1.73
TARDBP-206ENST00000473869 KRTAP4-11Q9BYQ6 195 aa4.19□□□□□ -1.74
TARDBP-206ENST00000473869 LCE5AQ5TCM9 118 aa4.17□□□□□ -1.74
TARDBP-206ENST00000473869 KMT2DO14686 5537 aa4.16□□□□□ -1.74
TARDBP-206ENST00000473869 KRTAP8-1Q8IUC2 63 aa4.15□□□□□ -1.74
TARDBP-206ENST00000473869 SYNE2Q8WXH0 6885 aaKnown RBP4.13□□□□□ -1.75
TARDBP-206ENST00000473869 KRTAP12-3P60328 96 aa4.09□□□□□ -1.75
TARDBP-206ENST00000473869 KRTAP19-5Q3LI72 72 aa4.07□□□□□ -1.76
TARDBP-206ENST00000473869 KRTAP15-1Q3LI76 137 aa4.01□□□□□ -1.77
TARDBP-206ENST00000473869 KRTAP19-7Q3SYF9 63 aa3.99□□□□□ -1.77
TARDBP-206ENST00000473869 MT1EP04732 61 aa3.93□□□□□ -1.78
TARDBP-206ENST00000473869 SPRR2FQ96RM1 72 aa3.93□□□□□ -1.78
TARDBP-206ENST00000473869 KRTAP6-3Q3LI67 103 aa3.91□□□□□ -1.78
TARDBP-206ENST00000473869 KRTAP5-9P26371 169 aa3.89□□□□□ -1.79
TARDBP-206ENST00000473869 MUC12Q9UKN1 5478 aa3.89□□□□□ -1.79
TARDBP-206ENST00000473869 MT1LQ93083 61 aa3.85□□□□□ -1.79
TARDBP-206ENST00000473869 MDN1Q9NU22 5596 aa3.82□□□□□ -1.8
TARDBP-206ENST00000473869 LCE3CQ5T5A8 94 aa3.82□□□□□ -1.8
TARDBP-206ENST00000473869 SPRR5A0A1B0GTR4 108 aa3.79□□□□□ -1.8
TARDBP-206ENST00000473869 KRTAP19-3Q7Z4W3 81 aa3.79□□□□□ -1.8
TARDBP-206ENST00000473869 SPRR2EP22531 72 aa3.78□□□□□ -1.81
TARDBP-206ENST00000473869 SPRR2BP35325 72 aa3.78□□□□□ -1.81
TARDBP-206ENST00000473869 SPRR2AP35326 72 aa3.78□□□□□ -1.81
TARDBP-206ENST00000473869 MT1GP13640 62 aa3.76□□□□□ -1.81
TARDBP-206ENST00000473869 LCE1AQ5T7P2 110 aa3.75□□□□□ -1.81
TARDBP-206ENST00000473869 NEBP20929 6669 aa3.75□□□□□ -1.81
TARDBP-206ENST00000473869 LUZP6Q538Z0 58 aa3.72□□□□□ -1.81
TARDBP-206ENST00000473869 MT1MQ8N339 61 aa3.71□□□□□ -1.82
TARDBP-206ENST00000473869 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
TARDBP-206ENST00000473869 SPRR2DP22532 72 aa3.64□□□□□ -1.83
TARDBP-206ENST00000473869 KRTAP4-3Q9BYR4 195 aa3.63□□□□□ -1.83
TARDBP-206ENST00000473869 DSTQ03001 7570 aaKnown RBP3.61□□□□□ -1.83
TARDBP-206ENST00000473869 KRTAP9-6A8MVA2 160 aa3.58□□□□□ -1.84
TARDBP-206ENST00000473869 KRTAP20-1Q3LI63 56 aa3.47□□□□□ -1.85
TARDBP-206ENST00000473869 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
TARDBP-206ENST00000473869 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
TARDBP-206ENST00000473869 KRTAP2-2Q9BYT5 123 aa3.38□□□□□ -1.87
TARDBP-206ENST00000473869 KRTAP2-1Q9BYU5 128 aa3.38□□□□□ -1.87
TARDBP-206ENST00000473869 KRTAP5-5Q701N2 237 aaPredicted RBP3.32□□□□□ -1.88
TARDBP-206ENST00000473869 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
TARDBP-206ENST00000473869 MT1AP04731 61 aa3.28□□□□□ -1.88
TARDBP-206ENST00000473869 KRTAP6-1Q3LI64 71 aa3.25□□□□□ -1.89
TARDBP-206ENST00000473869 KRTAP5-4Q6L8H1 288 aa3.2□□□□□ -1.9
TARDBP-206ENST00000473869 MT4P47944 62 aa3.19□□□□□ -1.9
TARDBP-206ENST00000473869 SYNE1Q8NF91 8797 aaKnown RBP3.15□□□□□ -1.91
TARDBP-206ENST00000473869 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
TARDBP-206ENST00000473869 HMCN1Q96RW7 5635 aa3.1□□□□□ -1.91
TARDBP-206ENST00000473869 INE1O15225 51 aa3.08□□□□□ -1.92
TARDBP-206ENST00000473869 KRTAP20-2Q3LI61 65 aa3.03□□□□□ -1.92
TARDBP-206ENST00000473869 KRTAP6-2Q3LI66 62 aa3□□□□□ -1.93
TARDBP-206ENST00000473869 MT3P25713 68 aa2.99□□□□□ -1.93
TARDBP-206ENST00000473869 KRTAP5-2Q701N4 177 aa2.89□□□□□ -1.95
TARDBP-206ENST00000473869 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
TARDBP-206ENST00000473869 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
TARDBP-206ENST00000473869 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
TARDBP-206ENST00000473869 AHNAK2Q8IVF2 5795 aa2.81□□□□□ -1.96
TARDBP-206ENST00000473869 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
TARDBP-206ENST00000473869 LCE1EQ5T753 118 aa2.74□□□□□ -1.97
TARDBP-206ENST00000473869 GPR98Q8WXG9 6306 aa2.71□□□□□ -1.98
TARDBP-206ENST00000473869 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
TARDBP-206ENST00000473869 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
TARDBP-206ENST00000473869 KRTAP5-10Q6L8G5 202 aa2.68□□□□□ -1.98
TARDBP-206ENST00000473869 KRTAP5-8O75690 187 aa2.56□□□□□ -2
TARDBP-206ENST00000473869 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
TARDBP-206ENST00000473869 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
TARDBP-206ENST00000473869 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
TARDBP-206ENST00000473869 PRM1P04553 51 aa2.42□□□□□ -2.02
TARDBP-206ENST00000473869 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
TARDBP-206ENST00000473869 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
TARDBP-206ENST00000473869 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
TARDBP-206ENST00000473869 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
TARDBP-206ENST00000473869 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
TARDBP-206ENST00000473869 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
TARDBP-206ENST00000473869 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
TARDBP-206ENST00000473869 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
TARDBP-206ENST00000473869 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms