RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 SYNE2Q8WXH0 6885 aaKnown RBP0.62□□□□□ -2.31
CCDC39-203ENST00000473854 FSIP2Q5CZC0 6907 aa0.61□□□□□ -2.31
CCDC39-203ENST00000473854 P0C880 135 aa0.61□□□□□ -2.31
CCDC39-203ENST00000473854 CDC42SE1Q9NRR8 79 aa0.61□□□□□ -2.31
CCDC39-203ENST00000473854 PRO0628Q9UI54 55 aa0.61□□□□□ -2.31
CCDC39-203ENST00000473854 V9GYY9 64 aa0.61□□□□□ -2.31
CCDC39-203ENST00000473854 A0A1B0GU69 56 aa0.6□□□□□ -2.31
CCDC39-203ENST00000473854 A6NED7 52 aa0.6□□□□□ -2.31
CCDC39-203ENST00000473854 A6NN06 94 aa0.6□□□□□ -2.31
CCDC39-203ENST00000473854 H1FX-AS1Q4G0G2 97 aa0.6□□□□□ -2.31
CCDC39-203ENST00000473854 SPINT4Q6UDR6 99 aa0.6□□□□□ -2.31
CCDC39-203ENST00000473854 ATP11AUNQ6ZP68 121 aa0.6□□□□□ -2.31
CCDC39-203ENST00000473854 S4R3F8 94 aa0.6□□□□□ -2.31
CCDC39-203ENST00000473854 MACF1Q9UPN3 7388 aaKnown RBP0.6□□□□□ -2.31
CCDC39-203ENST00000473854 MIR22HGQ0VDD5 57 aa0.59□□□□□ -2.31
CCDC39-203ENST00000473854 LUZP6Q538Z0 58 aa0.59□□□□□ -2.31
CCDC39-203ENST00000473854 SPATA8Q6RVD6 105 aa0.59□□□□□ -2.31
CCDC39-203ENST00000473854 ADM2Q7Z4H4 148 aa0.59□□□□□ -2.31
CCDC39-203ENST00000473854 UQCR11O14957 56 aa0.58□□□□□ -2.32
CCDC39-203ENST00000473854 MT1HP80294 61 aa0.58□□□□□ -2.32
CCDC39-203ENST00000473854 SPTSSBQ8NFR3 76 aa0.58□□□□□ -2.32
CCDC39-203ENST00000473854 RBM12B-AS1Q9P1G2 102 aa0.58□□□□□ -2.32
CCDC39-203ENST00000473854 A0A0D9SG42 100 aa0.57□□□□□ -2.32
CCDC39-203ENST00000473854 A0A1B0GU33 70 aa0.57□□□□□ -2.32
CCDC39-203ENST00000473854 KRTAP12-1P59990 96 aa0.57□□□□□ -2.32
CCDC39-203ENST00000473854 KTN1-AS1Q86SY8 53 aa0.57□□□□□ -2.32
CCDC39-203ENST00000473854 NEBP20929 6669 aa0.57□□□□□ -2.32
CCDC39-203ENST00000473854 M0QZ58 72 aa0.56□□□□□ -2.32
CCDC39-203ENST00000473854 MT2AP02795 61 aa0.56□□□□□ -2.32
CCDC39-203ENST00000473854 MT1FP04733 61 aa0.56□□□□□ -2.32
CCDC39-203ENST00000473854 PMAIP1Q13794 54 aa0.56□□□□□ -2.32
CCDC39-203ENST00000473854 CSAG1Q6PB30 78 aa0.56□□□□□ -2.32
CCDC39-203ENST00000473854 R4GN34 69 aa0.56□□□□□ -2.32
CCDC39-203ENST00000473854 C10orf95Q9H7T3 257 aa0.55□□□□□ -2.32
CCDC39-203ENST00000473854 MT1BP07438 61 aa0.54□□□□□ -2.32
CCDC39-203ENST00000473854 ROMO1P60602 79 aa0.54□□□□□ -2.32
CCDC39-203ENST00000473854 KRTAP19-8Q3LI54 63 aa0.54□□□□□ -2.32
CCDC39-203ENST00000473854 LINC01554Q52M75 96 aa0.54□□□□□ -2.32
CCDC39-203ENST00000473854 SPRR2GQ9BYE4 73 aa0.54□□□□□ -2.32
CCDC39-203ENST00000473854 CRIPTQ9P021 101 aa0.54□□□□□ -2.32
CCDC39-203ENST00000473854 KRTAP25-1Q3LHN0 102 aa0.53□□□□□ -2.32
CCDC39-203ENST00000473854 GPR98Q8WXG9 6306 aa0.52□□□□□ -2.33
CCDC39-203ENST00000473854 SYNE1Q8NF91 8797 aaKnown RBP0.52□□□□□ -2.33
CCDC39-203ENST00000473854 M0R2T5 61 aa0.52□□□□□ -2.33
CCDC39-203ENST00000473854 MT1XP80297 61 aa0.52□□□□□ -2.33
CCDC39-203ENST00000473854 K7ERS5 55 aa0.51□□□□□ -2.33
CCDC39-203ENST00000473854 DSTQ03001 7570 aaKnown RBP0.51□□□□□ -2.33
CCDC39-203ENST00000473854 MUC5ACP98088 5654 aa0.49□□□□□ -2.33
CCDC39-203ENST00000473854 TNP1P09430 55 aa0.48□□□□□ -2.33
CCDC39-203ENST00000473854 KRTAP19-6Q3LI70 58 aa0.48□□□□□ -2.33
CCDC39-203ENST00000473854 PLAC4Q8WY50 150 aa0.48□□□□□ -2.33
CCDC39-203ENST00000473854 KRTAP19-5Q3LI72 72 aa0.47□□□□□ -2.33
CCDC39-203ENST00000473854 KRTAP19-7Q3SYF9 63 aa0.47□□□□□ -2.33
CCDC39-203ENST00000473854 KRTAP8-1Q8IUC2 63 aa0.47□□□□□ -2.33
CCDC39-203ENST00000473854 MT1EP04732 61 aa0.46□□□□□ -2.34
CCDC39-203ENST00000473854 PRO2289Q9P1D8 64 aa0.45□□□□□ -2.34
CCDC39-203ENST00000473854 MT1LQ93083 61 aa0.44□□□□□ -2.34
CCDC39-203ENST00000473854 MT1MQ8N339 61 aa0.43□□□□□ -2.34
CCDC39-203ENST00000473854 KRTAP19-3Q7Z4W3 81 aa0.42□□□□□ -2.34
CCDC39-203ENST00000473854 SPRR2FQ96RM1 72 aa0.42□□□□□ -2.34
CCDC39-203ENST00000473854 MT1GP13640 62 aa0.41□□□□□ -2.34
CCDC39-203ENST00000473854 KRTAP2-3P0C7H8 128 aa0.4□□□□□ -2.35
CCDC39-203ENST00000473854 KRTAP2-4Q9BYR9 128 aa0.4□□□□□ -2.35
CCDC39-203ENST00000473854 KRTAP2-1Q9BYU5 128 aa0.4□□□□□ -2.35
CCDC39-203ENST00000473854 SPRR2EP22531 72 aa0.39□□□□□ -2.35
CCDC39-203ENST00000473854 SPRR2BP35325 72 aa0.39□□□□□ -2.35
CCDC39-203ENST00000473854 SPRR2AP35326 72 aa0.39□□□□□ -2.35
CCDC39-203ENST00000473854 KRTAP6-1Q3LI64 71 aa0.39□□□□□ -2.35
CCDC39-203ENST00000473854 MT1AP04731 61 aa0.37□□□□□ -2.35
CCDC39-203ENST00000473854 SPRR2DP22532 72 aa0.37□□□□□ -2.35
CCDC39-203ENST00000473854 KRTAP6-2Q3LI66 62 aa0.34□□□□□ -2.36
CCDC39-203ENST00000473854 INE1O15225 51 aa0.33□□□□□ -2.36
CCDC39-203ENST00000473854 MT4P47944 62 aa0.33□□□□□ -2.36
CCDC39-203ENST00000473854 KRTAP20-2Q3LI61 65 aa0.33□□□□□ -2.36
CCDC39-203ENST00000473854 KRTAP20-1Q3LI63 56 aa0.32□□□□□ -2.36
CCDC39-203ENST00000473854 PRM1P04553 51 aa0.3□□□□□ -2.36
CCDC39-203ENST00000473854 PHGR1C9JFL3 82 aa0.2□□□□□ -2.38
CCDC39-203ENST00000473854 KRTAP21-1Q3LI58 79 aa0.19□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 47.8 ms