RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 NREPQ16612 68 aa1.75□□□□□ -2.13
SEC22A-204ENST00000473494 KRTAP19-2Q3LHN2 52 aa1.75□□□□□ -2.13
SEC22A-204ENST00000473494 C9orf92A6NGG3 77 aa1.74□□□□□ -2.13
SEC22A-204ENST00000473494 RPL37P61927 97 aaKnown RBP1.74□□□□□ -2.13
SEC22A-204ENST00000473494 FLGP20930 4061 aaPredicted RBP1.72□□□□□ -2.13
SEC22A-204ENST00000473494 NDUFB1O75438 58 aa1.72□□□□□ -2.13
SEC22A-204ENST00000473494 MMP24-AS1A0A0U1RRL7 71 aa1.7□□□□□ -2.14
SEC22A-204ENST00000473494 K7EQZ3 153 aa1.7□□□□□ -2.14
SEC22A-204ENST00000473494 MT1HP80294 61 aa1.69□□□□□ -2.14
SEC22A-204ENST00000473494 TP53AIP1Q9HCN2 124 aa1.69□□□□□ -2.14
SEC22A-204ENST00000473494 SPATA8Q6RVD6 105 aa1.68□□□□□ -2.14
SEC22A-204ENST00000473494 MRPL34Q9BQ48 92 aaKnown RBP1.68□□□□□ -2.14
SEC22A-204ENST00000473494 HMCN1Q96RW7 5635 aa1.68□□□□□ -2.14
SEC22A-204ENST00000473494 H0Y9P7 68 aa1.67□□□□□ -2.14
SEC22A-204ENST00000473494 SPINK7P58062 85 aa1.66□□□□□ -2.14
SEC22A-204ENST00000473494 FSIP2Q5CZC0 6907 aa1.66□□□□□ -2.14
SEC22A-204ENST00000473494 SSPOA2VEC9 5147 aa1.64□□□□□ -2.15
SEC22A-204ENST00000473494 WFDC13Q8IUB5 93 aa1.64□□□□□ -2.15
SEC22A-204ENST00000473494 USH2AO75445 5202 aa1.64□□□□□ -2.15
SEC22A-204ENST00000473494 COX6B2Q6YFQ2 88 aa1.6□□□□□ -2.15
SEC22A-204ENST00000473494 M0R2T5 61 aa1.59□□□□□ -2.15
SEC22A-204ENST00000473494 MT2AP02795 61 aa1.59□□□□□ -2.15
SEC22A-204ENST00000473494 MT1FP04733 61 aa1.58□□□□□ -2.16
SEC22A-204ENST00000473494 A0A1B0GU69 56 aa1.56□□□□□ -2.16
SEC22A-204ENST00000473494 FCGBPQ9Y6R7 5405 aaPredicted RBP1.55□□□□□ -2.16
SEC22A-204ENST00000473494 H1FX-AS1Q4G0G2 97 aa1.55□□□□□ -2.16
SEC22A-204ENST00000473494 H0YAA0 97 aa1.52□□□□□ -2.17
SEC22A-204ENST00000473494 C10orf95Q9H7T3 257 aa1.49□□□□□ -2.17
SEC22A-204ENST00000473494 S4R3F8 94 aa1.49□□□□□ -2.17
SEC22A-204ENST00000473494 KRTAP19-6Q3LI70 58 aa1.47□□□□□ -2.17
SEC22A-204ENST00000473494 A0A0D9SG42 100 aa1.46□□□□□ -2.18
SEC22A-204ENST00000473494 CRIPTQ9P021 101 aa1.46□□□□□ -2.18
SEC22A-204ENST00000473494 SYNE2Q8WXH0 6885 aaKnown RBP1.46□□□□□ -2.18
SEC22A-204ENST00000473494 MACF1Q9UPN3 7388 aaKnown RBP1.46□□□□□ -2.18
SEC22A-204ENST00000473494 MT1BP07438 61 aa1.45□□□□□ -2.18
SEC22A-204ENST00000473494 SPRR2GQ9BYE4 73 aa1.43□□□□□ -2.18
SEC22A-204ENST00000473494 M0QZ58 72 aa1.42□□□□□ -2.18
SEC22A-204ENST00000473494 KRTAP19-8Q3LI54 63 aa1.41□□□□□ -2.18
SEC22A-204ENST00000473494 MUC12Q9UKN1 5478 aa1.41□□□□□ -2.18
SEC22A-204ENST00000473494 KMT2DO14686 5537 aa1.4□□□□□ -2.19
SEC22A-204ENST00000473494 NEBP20929 6669 aa1.37□□□□□ -2.19
SEC22A-204ENST00000473494 MT1XP80297 61 aa1.36□□□□□ -2.19
SEC22A-204ENST00000473494 MDN1Q9NU22 5596 aa1.34□□□□□ -2.19
SEC22A-204ENST00000473494 SPRR2FQ96RM1 72 aa1.29□□□□□ -2.2
SEC22A-204ENST00000473494 KRTAP20-1Q3LI63 56 aa1.28□□□□□ -2.2
SEC22A-204ENST00000473494 SPRR2EP22531 72 aa1.27□□□□□ -2.21
SEC22A-204ENST00000473494 SPRR2BP35325 72 aa1.27□□□□□ -2.21
SEC22A-204ENST00000473494 SPRR2AP35326 72 aa1.27□□□□□ -2.21
SEC22A-204ENST00000473494 KRTAP8-1Q8IUC2 63 aa1.27□□□□□ -2.21
SEC22A-204ENST00000473494 TNP1P09430 55 aa1.23□□□□□ -2.21
SEC22A-204ENST00000473494 KRTAP2-3P0C7H8 128 aa1.23□□□□□ -2.21
SEC22A-204ENST00000473494 KRTAP2-4Q9BYR9 128 aa1.23□□□□□ -2.21
SEC22A-204ENST00000473494 SPRR2DP22532 72 aa1.22□□□□□ -2.21
SEC22A-204ENST00000473494 KRTAP19-7Q3SYF9 63 aa1.21□□□□□ -2.22
SEC22A-204ENST00000473494 KRTAP2-1Q9BYU5 128 aa1.2□□□□□ -2.22
SEC22A-204ENST00000473494 MT1EP04732 61 aa1.19□□□□□ -2.22
SEC22A-204ENST00000473494 KRTAP19-5Q3LI72 72 aa1.18□□□□□ -2.22
SEC22A-204ENST00000473494 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
SEC22A-204ENST00000473494 DSTQ03001 7570 aaKnown RBP1.16□□□□□ -2.22
SEC22A-204ENST00000473494 KRTAP5-10Q6L8G5 202 aa1.16□□□□□ -2.22
SEC22A-204ENST00000473494 KRTAP19-3Q7Z4W3 81 aa1.16□□□□□ -2.22
SEC22A-204ENST00000473494 MT1MQ8N339 61 aa1.14□□□□□ -2.23
SEC22A-204ENST00000473494 MT1LQ93083 61 aa1.14□□□□□ -2.23
SEC22A-204ENST00000473494 MT1GP13640 62 aa1.12□□□□□ -2.23
SEC22A-204ENST00000473494 GPR98Q8WXG9 6306 aa1.1□□□□□ -2.23
SEC22A-204ENST00000473494 MT4P47944 62 aa1.1□□□□□ -2.23
SEC22A-204ENST00000473494 AHNAK2Q8IVF2 5795 aa1.09□□□□□ -2.23
SEC22A-204ENST00000473494 SYNE1Q8NF91 8797 aaKnown RBP1.03□□□□□ -2.24
SEC22A-204ENST00000473494 KRTAP20-2Q3LI61 65 aa1.02□□□□□ -2.25
SEC22A-204ENST00000473494 KRTAP6-1Q3LI64 71 aa0.99□□□□□ -2.25
SEC22A-204ENST00000473494 MT1AP04731 61 aa0.95□□□□□ -2.26
SEC22A-204ENST00000473494 KRTAP6-2Q3LI66 62 aa0.93□□□□□ -2.26
SEC22A-204ENST00000473494 AHNAKQ09666 5890 aaKnown RBP0.88□□□□□ -2.27
SEC22A-204ENST00000473494 MUC5BQ9HC84 5762 aaPredicted RBP0.88□□□□□ -2.27
SEC22A-204ENST00000473494 MUC5ACP98088 5654 aa0.87□□□□□ -2.27
SEC22A-204ENST00000473494 KRTAP21-1Q3LI58 79 aa0.82□□□□□ -2.28
SEC22A-204ENST00000473494 PRM1P04553 51 aa0.76□□□□□ -2.29
SEC22A-204ENST00000473494 PHGR1C9JFL3 82 aa0.66□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 83.5 ms