RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 SPRR2BP35325 72 aa4.57□□□□□ -1.68
TRAPPC12-217ENST00000473348 SPRR2AP35326 72 aa4.57□□□□□ -1.68
TRAPPC12-217ENST00000473348 LCE1AQ5T7P2 110 aa4.56□□□□□ -1.68
TRAPPC12-217ENST00000473348 KRTAP4-12Q9BQ66 201 aa4.53□□□□□ -1.68
TRAPPC12-217ENST00000473348 MDN1Q9NU22 5596 aa4.53□□□□□ -1.68
TRAPPC12-217ENST00000473348 LCE3BQ5TA77 95 aa4.52□□□□□ -1.69
TRAPPC12-217ENST00000473348 KRTAP19-4Q3LI73 84 aa4.51□□□□□ -1.69
TRAPPC12-217ENST00000473348 SVIPQ8NHG7 77 aa4.51□□□□□ -1.69
TRAPPC12-217ENST00000473348 KRTAP19-3Q7Z4W3 81 aa4.5□□□□□ -1.69
TRAPPC12-217ENST00000473348 NEBP20929 6669 aa4.49□□□□□ -1.69
TRAPPC12-217ENST00000473348 MT1LQ93083 61 aa4.49□□□□□ -1.69
TRAPPC12-217ENST00000473348 PRAC1Q96KF2 57 aa4.49□□□□□ -1.69
TRAPPC12-217ENST00000473348 KTN1-AS1Q86SY8 53 aa4.47□□□□□ -1.69
TRAPPC12-217ENST00000473348 LCE5AQ5TCM9 118 aa4.45□□□□□ -1.7
TRAPPC12-217ENST00000473348 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
TRAPPC12-217ENST00000473348 MT1GP13640 62 aa4.42□□□□□ -1.7
TRAPPC12-217ENST00000473348 SPRR2DP22532 72 aa4.42□□□□□ -1.7
TRAPPC12-217ENST00000473348 MT1MQ8N339 61 aa4.38□□□□□ -1.71
TRAPPC12-217ENST00000473348 KRTAP9-9Q9BYP9 154 aa4.33□□□□□ -1.72
TRAPPC12-217ENST00000473348 KRTAP9-4Q9BYQ2 154 aa4.33□□□□□ -1.72
TRAPPC12-217ENST00000473348 KRTAP4-7Q9BYR0 210 aa4.29□□□□□ -1.72
TRAPPC12-217ENST00000473348 KRTAP20-1Q3LI63 56 aa4.28□□□□□ -1.72
TRAPPC12-217ENST00000473348 KRTAP4-3Q9BYR4 195 aa4.27□□□□□ -1.73
TRAPPC12-217ENST00000473348 KRTAP2-3P0C7H8 128 aa4.26□□□□□ -1.73
TRAPPC12-217ENST00000473348 LCE3CQ5T5A8 94 aa4.26□□□□□ -1.73
TRAPPC12-217ENST00000473348 KRTAP2-4Q9BYR9 128 aa4.26□□□□□ -1.73
TRAPPC12-217ENST00000473348 LCE1DQ5T752 114 aa4.21□□□□□ -1.74
TRAPPC12-217ENST00000473348 LCE4AQ5TA78 99 aa4.2□□□□□ -1.74
TRAPPC12-217ENST00000473348 DSTQ03001 7570 aaKnown RBP4.18□□□□□ -1.74
TRAPPC12-217ENST00000473348 KRTAP2-2Q9BYT5 123 aa4.15□□□□□ -1.75
TRAPPC12-217ENST00000473348 KRTAP2-1Q9BYU5 128 aa4.15□□□□□ -1.75
TRAPPC12-217ENST00000473348 KRTAP4-9Q9BYQ8 210 aa4.04□□□□□ -1.76
TRAPPC12-217ENST00000473348 KRTAP9-6A8MVA2 160 aa4.02□□□□□ -1.77
TRAPPC12-217ENST00000473348 SPRR5A0A1B0GTR4 108 aa3.98□□□□□ -1.77
TRAPPC12-217ENST00000473348 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
TRAPPC12-217ENST00000473348 KRTAP5-4Q6L8H1 288 aa3.92□□□□□ -1.78
TRAPPC12-217ENST00000473348 KRTAP4-11Q9BYQ6 195 aa3.92□□□□□ -1.78
TRAPPC12-217ENST00000473348 KRTAP4-2Q9BYR5 136 aa3.88□□□□□ -1.79
TRAPPC12-217ENST00000473348 MT4P47944 62 aa3.84□□□□□ -1.79
TRAPPC12-217ENST00000473348 MT1AP04731 61 aa3.83□□□□□ -1.8
TRAPPC12-217ENST00000473348 KRTAP6-1Q3LI64 71 aa3.78□□□□□ -1.8
TRAPPC12-217ENST00000473348 KRTAP12-4P60329 112 aa3.75□□□□□ -1.81
TRAPPC12-217ENST00000473348 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
TRAPPC12-217ENST00000473348 HMCN1Q96RW7 5635 aa3.71□□□□□ -1.82
TRAPPC12-217ENST00000473348 LUZP6Q538Z0 58 aa3.7□□□□□ -1.82
TRAPPC12-217ENST00000473348 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
TRAPPC12-217ENST00000473348 KRTAP5-3Q6L8H2 238 aa3.55□□□□□ -1.84
TRAPPC12-217ENST00000473348 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
TRAPPC12-217ENST00000473348 KRTAP5-2Q701N4 177 aa3.51□□□□□ -1.85
TRAPPC12-217ENST00000473348 MT3P25713 68 aa3.47□□□□□ -1.85
TRAPPC12-217ENST00000473348 AHNAK2Q8IVF2 5795 aa3.43□□□□□ -1.86
TRAPPC12-217ENST00000473348 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
TRAPPC12-217ENST00000473348 GPR98Q8WXG9 6306 aa3.33□□□□□ -1.88
TRAPPC12-217ENST00000473348 KRTAP5-10Q6L8G5 202 aa3.33□□□□□ -1.88
TRAPPC12-217ENST00000473348 A0A0A0MQY5 61 aa3.29□□□□□ -1.88
TRAPPC12-217ENST00000473348 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
TRAPPC12-217ENST00000473348 LCE3DQ9BYE3 92 aa3.15□□□□□ -1.91
TRAPPC12-217ENST00000473348 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
TRAPPC12-217ENST00000473348 KRTAP5-7Q6L8G8 165 aa3.13□□□□□ -1.91
TRAPPC12-217ENST00000473348 LCE1EQ5T753 118 aa3.07□□□□□ -1.92
TRAPPC12-217ENST00000473348 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
TRAPPC12-217ENST00000473348 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
TRAPPC12-217ENST00000473348 MUC5ACP98088 5654 aa2.99□□□□□ -1.93
TRAPPC12-217ENST00000473348 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
TRAPPC12-217ENST00000473348 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
TRAPPC12-217ENST00000473348 INE1O15225 51 aa2.8□□□□□ -1.96
TRAPPC12-217ENST00000473348 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
TRAPPC12-217ENST00000473348 AHNAKQ09666 5890 aaKnown RBP2.7□□□□□ -1.98
TRAPPC12-217ENST00000473348 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.65□□□□□ -1.99
TRAPPC12-217ENST00000473348 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
TRAPPC12-217ENST00000473348 PRM1P04553 51 aa2.53□□□□□ -2
TRAPPC12-217ENST00000473348 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
TRAPPC12-217ENST00000473348 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
TRAPPC12-217ENST00000473348 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
TRAPPC12-217ENST00000473348 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
TRAPPC12-217ENST00000473348 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
TRAPPC12-217ENST00000473348 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
TRAPPC12-217ENST00000473348 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 159.2 ms