RNA–Protein interactions for RNA: ENST00000473104.5

SH3YL1-219, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 1 (best)

Gene SH3YL1, Length 2,463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-219ENST00000473104 KRTAP4-7Q9BYR0 210 aa3.48□□□□□ -1.85
SH3YL1-219ENST00000473104 LCE3BQ5TA77 95 aa3.48□□□□□ -1.85
SH3YL1-219ENST00000473104 SSPOA2VEC9 5147 aa3.47□□□□□ -1.85
SH3YL1-219ENST00000473104 LCE3CQ5T5A8 94 aa3.47□□□□□ -1.85
SH3YL1-219ENST00000473104 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
SH3YL1-219ENST00000473104 LCE1AQ5T7P2 110 aa3.46□□□□□ -1.86
SH3YL1-219ENST00000473104 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
SH3YL1-219ENST00000473104 KRTAP2-1Q9BYU5 128 aa3.46□□□□□ -1.86
SH3YL1-219ENST00000473104 KRTAP5-3Q6L8H2 238 aa3.45□□□□□ -1.86
SH3YL1-219ENST00000473104 KRTAP19-6Q3LI70 58 aa3.43□□□□□ -1.86
SH3YL1-219ENST00000473104 KRTAP9-6A8MVA2 160 aa3.39□□□□□ -1.87
SH3YL1-219ENST00000473104 KRTAP10-7P60409 375 aaPredicted RBP3.38□□□□□ -1.87
SH3YL1-219ENST00000473104 FCGBPQ9Y6R7 5405 aaPredicted RBP3.33□□□□□ -1.88
SH3YL1-219ENST00000473104 CRCT1Q9UGL9 99 aa3.31□□□□□ -1.88
SH3YL1-219ENST00000473104 KMT2DO14686 5537 aa3.31□□□□□ -1.88
SH3YL1-219ENST00000473104 KRTAP4-2Q9BYR5 136 aa3.29□□□□□ -1.88
SH3YL1-219ENST00000473104 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
SH3YL1-219ENST00000473104 LCE1DQ5T752 114 aa3.27□□□□□ -1.89
SH3YL1-219ENST00000473104 KRTAP4-9Q9BYQ8 210 aa3.26□□□□□ -1.89
SH3YL1-219ENST00000473104 KRTAP19-5Q3LI72 72 aa3.25□□□□□ -1.89
SH3YL1-219ENST00000473104 KRTAP4-12Q9BQ66 201 aa3.25□□□□□ -1.89
SH3YL1-219ENST00000473104 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
SH3YL1-219ENST00000473104 KRTAP12-4P60329 112 aa3.21□□□□□ -1.89
SH3YL1-219ENST00000473104 MACF1Q9UPN3 7388 aaKnown RBP3.17□□□□□ -1.9
SH3YL1-219ENST00000473104 KRTAP19-7Q3SYF9 63 aa3.15□□□□□ -1.91
SH3YL1-219ENST00000473104 MT3P25713 68 aa3.13□□□□□ -1.91
SH3YL1-219ENST00000473104 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
SH3YL1-219ENST00000473104 SYNE2Q8WXH0 6885 aaKnown RBP3.11□□□□□ -1.91
SH3YL1-219ENST00000473104 KRTAP6-3Q3LI67 103 aa3.1□□□□□ -1.91
SH3YL1-219ENST00000473104 MT1EP04732 61 aa3.09□□□□□ -1.92
SH3YL1-219ENST00000473104 SPRR2FQ96RM1 72 aa3.05□□□□□ -1.92
SH3YL1-219ENST00000473104 MUC12Q9UKN1 5478 aa3.05□□□□□ -1.92
SH3YL1-219ENST00000473104 KRTAP5-9P26371 169 aa3.02□□□□□ -1.93
SH3YL1-219ENST00000473104 MT1LQ93083 61 aa3.02□□□□□ -1.93
SH3YL1-219ENST00000473104 KRTAP4-11Q9BYQ6 195 aa3.01□□□□□ -1.93
SH3YL1-219ENST00000473104 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
SH3YL1-219ENST00000473104 KRTAP19-3Q7Z4W3 81 aa2.97□□□□□ -1.93
SH3YL1-219ENST00000473104 MDN1Q9NU22 5596 aa2.95□□□□□ -1.94
SH3YL1-219ENST00000473104 MT1GP13640 62 aa2.94□□□□□ -1.94
SH3YL1-219ENST00000473104 PRM1P04553 51 aa2.93□□□□□ -1.94
SH3YL1-219ENST00000473104 MT1MQ8N339 61 aa2.91□□□□□ -1.94
SH3YL1-219ENST00000473104 SPRR2EP22531 72 aa2.9□□□□□ -1.95
SH3YL1-219ENST00000473104 SPRR2BP35325 72 aa2.9□□□□□ -1.95
SH3YL1-219ENST00000473104 SPRR2AP35326 72 aa2.9□□□□□ -1.95
SH3YL1-219ENST00000473104 KRTAP4-3Q9BYR4 195 aa2.87□□□□□ -1.95
SH3YL1-219ENST00000473104 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
SH3YL1-219ENST00000473104 DSTQ03001 7570 aaKnown RBP2.83□□□□□ -1.96
SH3YL1-219ENST00000473104 SYNE1Q8NF91 8797 aaKnown RBP2.8□□□□□ -1.96
SH3YL1-219ENST00000473104 SPRR2DP22532 72 aa2.79□□□□□ -1.96
SH3YL1-219ENST00000473104 NEBP20929 6669 aa2.77□□□□□ -1.97
SH3YL1-219ENST00000473104 MT1AP04731 61 aa2.73□□□□□ -1.97
SH3YL1-219ENST00000473104 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
SH3YL1-219ENST00000473104 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
SH3YL1-219ENST00000473104 KRTAP20-1Q3LI63 56 aa2.57□□□□□ -2
SH3YL1-219ENST00000473104 KRTAP6-1Q3LI64 71 aa2.55□□□□□ -2
SH3YL1-219ENST00000473104 OBSCNQ5VST9 7968 aa2.54□□□□□ -2
SH3YL1-219ENST00000473104 KRTAP5-4Q6L8H1 288 aa2.52□□□□□ -2.01
SH3YL1-219ENST00000473104 GPR98Q8WXG9 6306 aa2.49□□□□□ -2.01
SH3YL1-219ENST00000473104 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.47□□□□□ -2.01
SH3YL1-219ENST00000473104 MT4P47944 62 aa2.44□□□□□ -2.02
SH3YL1-219ENST00000473104 KRTAP20-2Q3LI61 65 aa2.36□□□□□ -2.03
SH3YL1-219ENST00000473104 KRTAP5-2Q701N4 177 aa2.28□□□□□ -2.04
SH3YL1-219ENST00000473104 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
SH3YL1-219ENST00000473104 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
SH3YL1-219ENST00000473104 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
SH3YL1-219ENST00000473104 LCE1BQ5T7P3 118 aa2.07□□□□□ -2.08
SH3YL1-219ENST00000473104 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
SH3YL1-219ENST00000473104 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
SH3YL1-219ENST00000473104 KRTAP5-10Q6L8G5 202 aa2□□□□□ -2.09
SH3YL1-219ENST00000473104 KRTAP5-8O75690 187 aa1.98□□□□□ -2.09
SH3YL1-219ENST00000473104 KRTAP5-1Q6L8H4 278 aa1.98□□□□□ -2.09
SH3YL1-219ENST00000473104 AHNAKQ09666 5890 aaKnown RBP1.98□□□□□ -2.09
SH3YL1-219ENST00000473104 MUC5ACP98088 5654 aa1.91□□□□□ -2.1
SH3YL1-219ENST00000473104 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
SH3YL1-219ENST00000473104 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.11
SH3YL1-219ENST00000473104 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
SH3YL1-219ENST00000473104 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
SH3YL1-219ENST00000473104 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 96.6 ms