RNA–Protein interactions for RNA: ENST00000472588.5

PAXBP1-208, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-208ENST00000472588 SPRR2BP35325 72 aa8.19□□□□□ -1.1
PAXBP1-208ENST00000472588 SPRR2AP35326 72 aa8.19□□□□□ -1.1
PAXBP1-208ENST00000472588 MT1EP04732 61 aa8.18□□□□□ -1.1
PAXBP1-208ENST00000472588 LCE1AQ5T7P2 110 aa8.12□□□□□ -1.11
PAXBP1-208ENST00000472588 KRTAP20-1Q3LI63 56 aa8.09□□□□□ -1.11
PAXBP1-208ENST00000472588 KRTAP15-1Q3LI76 137 aa8.01□□□□□ -1.13
PAXBP1-208ENST00000472588 KRTAP19-3Q7Z4W3 81 aa7.96□□□□□ -1.13
PAXBP1-208ENST00000472588 MT1LQ93083 61 aa7.95□□□□□ -1.14
PAXBP1-208ENST00000472588 SVIPQ8NHG7 77 aa7.95□□□□□ -1.14
PAXBP1-208ENST00000472588 KRTAP19-4Q3LI73 84 aa7.93□□□□□ -1.14
PAXBP1-208ENST00000472588 SPRR2DP22532 72 aa7.91□□□□□ -1.14
PAXBP1-208ENST00000472588 KRTAP2-3P0C7H8 128 aa7.9□□□□□ -1.14
PAXBP1-208ENST00000472588 KRTAP2-4Q9BYR9 128 aa7.9□□□□□ -1.14
PAXBP1-208ENST00000472588 MT1GP13640 62 aa7.89□□□□□ -1.15
PAXBP1-208ENST00000472588 LCE5AQ5TCM9 118 aa7.86□□□□□ -1.15
PAXBP1-208ENST00000472588 LOC100996750A0A140TA64 210 aa7.81□□□□□ -1.16
PAXBP1-208ENST00000472588 KRTAP4-6Q9BYQ5 205 aa7.81□□□□□ -1.16
PAXBP1-208ENST00000472588 MT1MQ8N339 61 aa7.72□□□□□ -1.17
PAXBP1-208ENST00000472588 LCE3CQ5T5A8 94 aa7.69□□□□□ -1.18
PAXBP1-208ENST00000472588 KRTAP2-2Q9BYT5 123 aa7.68□□□□□ -1.18
PAXBP1-208ENST00000472588 KRTAP2-1Q9BYU5 128 aa7.68□□□□□ -1.18
PAXBP1-208ENST00000472588 LCE3BQ5TA77 95 aa7.67□□□□□ -1.18
PAXBP1-208ENST00000472588 KRTAP4-7Q9BYR0 210 aa7.57□□□□□ -1.2
PAXBP1-208ENST00000472588 KRTAP4-3Q9BYR4 195 aa7.47□□□□□ -1.21
PAXBP1-208ENST00000472588 DSTQ03001 7570 aaKnown RBP7.42□□□□□ -1.22
PAXBP1-208ENST00000472588 SPRR5A0A1B0GTR4 108 aa7.29□□□□□ -1.24
PAXBP1-208ENST00000472588 KRTAP9-6A8MVA2 160 aa7.16□□□□□ -1.26
PAXBP1-208ENST00000472588 KRTAP4-9Q9BYQ8 210 aa7.05□□□□□ -1.28
PAXBP1-208ENST00000472588 LCE4AQ5TA78 99 aa7.01□□□□□ -1.29
PAXBP1-208ENST00000472588 KRTAP5-5Q701N2 237 aaPredicted RBP7□□□□□ -1.29
PAXBP1-208ENST00000472588 LUZP6Q538Z0 58 aa6.98□□□□□ -1.29
PAXBP1-208ENST00000472588 LCE1DQ5T752 114 aa6.93□□□□□ -1.3
PAXBP1-208ENST00000472588 KRTAP5-4Q6L8H1 288 aa6.93□□□□□ -1.3
PAXBP1-208ENST00000472588 MT4P47944 62 aa6.9□□□□□ -1.31
PAXBP1-208ENST00000472588 MT1AP04731 61 aa6.8□□□□□ -1.32
PAXBP1-208ENST00000472588 HMCN1Q96RW7 5635 aa6.79□□□□□ -1.32
PAXBP1-208ENST00000472588 KRTAP4-12Q9BQ66 201 aa6.72□□□□□ -1.33
PAXBP1-208ENST00000472588 KRTAP6-1Q3LI64 71 aa6.68□□□□□ -1.34
PAXBP1-208ENST00000472588 KRTAP12-4P60329 112 aa6.67□□□□□ -1.34
PAXBP1-208ENST00000472588 KRTAP9-9Q9BYP9 154 aa6.61□□□□□ -1.35
PAXBP1-208ENST00000472588 KRTAP9-4Q9BYQ2 154 aa6.61□□□□□ -1.35
PAXBP1-208ENST00000472588 SYNE1Q8NF91 8797 aaKnown RBP6.55□□□□□ -1.36
PAXBP1-208ENST00000472588 KRTAP20-2Q3LI61 65 aa6.53□□□□□ -1.36
PAXBP1-208ENST00000472588 GPR98Q8WXG9 6306 aa6.51□□□□□ -1.37
PAXBP1-208ENST00000472588 AHNAK2Q8IVF2 5795 aa6.42□□□□□ -1.38
PAXBP1-208ENST00000472588 NDUFAF8A1L188 74 aa6.42□□□□□ -1.38
PAXBP1-208ENST00000472588 KRTAP5-10Q6L8G5 202 aa6.33□□□□□ -1.4
PAXBP1-208ENST00000472588 KRTAP5-3Q6L8H2 238 aa6.32□□□□□ -1.4
PAXBP1-208ENST00000472588 KRTAP6-2Q3LI66 62 aa6.23□□□□□ -1.41
PAXBP1-208ENST00000472588 MT3P25713 68 aa6.21□□□□□ -1.42
PAXBP1-208ENST00000472588 KRTAP5-2Q701N4 177 aa6.16□□□□□ -1.42
PAXBP1-208ENST00000472588 KRTAP4-2Q9BYR5 136 aa6.08□□□□□ -1.44
PAXBP1-208ENST00000472588 KRTAP5-7Q6L8G8 165 aa6.08□□□□□ -1.44
PAXBP1-208ENST00000472588 KRTAP4-11Q9BYQ6 195 aa5.88□□□□□ -1.47
PAXBP1-208ENST00000472588 H3BS24 57 aa5.85□□□□□ -1.47
PAXBP1-208ENST00000472588 LCE3DQ9BYE3 92 aa5.74□□□□□ -1.49
PAXBP1-208ENST00000472588 KRTAP5-8O75690 187 aa5.68□□□□□ -1.5
PAXBP1-208ENST00000472588 OBSCNQ5VST9 7968 aa5.67□□□□□ -1.5
PAXBP1-208ENST00000472588 A0A0A0MQY5 61 aa5.65□□□□□ -1.51
PAXBP1-208ENST00000472588 LCE3EQ5T5B0 92 aa5.54□□□□□ -1.52
PAXBP1-208ENST00000472588 LCE1EQ5T753 118 aa5.5□□□□□ -1.53
PAXBP1-208ENST00000472588 KRTAP5-1Q6L8H4 278 aa5.44□□□□□ -1.54
PAXBP1-208ENST00000472588 INE1O15225 51 aa5.39□□□□□ -1.55
PAXBP1-208ENST00000472588 MUC5ACP98088 5654 aa5.26□□□□□ -1.57
PAXBP1-208ENST00000472588 MUC5BQ9HC84 5762 aaPredicted RBP5.22□□□□□ -1.57
PAXBP1-208ENST00000472588 AHNAKQ09666 5890 aaKnown RBP5.13□□□□□ -1.59
PAXBP1-208ENST00000472588 LCE1CQ5T751 118 aa5.1□□□□□ -1.59
PAXBP1-208ENST00000472588 LCE1BQ5T7P3 118 aa5.1□□□□□ -1.59
PAXBP1-208ENST00000472588 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.73□□□□□ -1.65
PAXBP1-208ENST00000472588 PRM1P04553 51 aa4.62□□□□□ -1.67
PAXBP1-208ENST00000472588 KRTAP5-11Q6L8G4 156 aa4.53□□□□□ -1.68
PAXBP1-208ENST00000472588 KRTAP21-2Q3LI59 83 aa4.39□□□□□ -1.71
PAXBP1-208ENST00000472588 LCE1FQ5T754 118 aa4.24□□□□□ -1.73
PAXBP1-208ENST00000472588 PHGR1C9JFL3 82 aa3.87□□□□□ -1.79
PAXBP1-208ENST00000472588 KRTAP4-4Q9BYR3 166 aa3.87□□□□□ -1.79
PAXBP1-208ENST00000472588 MUC19Q7Z5P9 8384 aa3.45□□□□□ -1.86
PAXBP1-208ENST00000472588 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
PAXBP1-208ENST00000472588 MUC16Q8WXI7 14507 aa2.49□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 76.6 ms