RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, human

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18B-208	ENST00000472267	KRTAP4-11	Q9BYQ6	195 aa		4.21	□□□□□ -1.73
MRPS18B-208	ENST00000472267	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.17	□□□□□ -1.74
MRPS18B-208	ENST00000472267	KRTAP4-2	Q9BYR5	136 aa		4.14	□□□□□ -1.75
MRPS18B-208	ENST00000472267	KMT2D	O14686	5537 aa		4.13	□□□□□ -1.75
MRPS18B-208	ENST00000472267	KRTAP15-1	Q3LI76	137 aa		4.1	□□□□□ -1.75
MRPS18B-208	ENST00000472267	KRTAP8-1	Q8IUC2	63 aa		4.1	□□□□□ -1.75
MRPS18B-208	ENST00000472267	KRTAP12-3	P60328	96 aa		4.06	□□□□□ -1.76
MRPS18B-208	ENST00000472267	KRTAP19-5	Q3LI72	72 aa		4.05	□□□□□ -1.76
MRPS18B-208	ENST00000472267	MACF1	Q9UPN3	7388 aa	Known RBP	3.97	□□□□□ -1.77
MRPS18B-208	ENST00000472267	KRTAP19-7	Q3SYF9	63 aa		3.96	□□□□□ -1.78
MRPS18B-208	ENST00000472267	KRTAP5-3	Q6L8H2	238 aa		3.95	□□□□□ -1.78
MRPS18B-208	ENST00000472267	NDUFAF8	A1L188	74 aa		3.92	□□□□□ -1.78
MRPS18B-208	ENST00000472267	LUZP6	Q538Z0	58 aa		3.92	□□□□□ -1.78
MRPS18B-208	ENST00000472267	SYNE2	Q8WXH0	6885 aa	Known RBP	3.9	□□□□□ -1.79
MRPS18B-208	ENST00000472267	MT1E	P04732	61 aa		3.9	□□□□□ -1.79
MRPS18B-208	ENST00000472267	SPRR2F	Q96RM1	72 aa		3.86	□□□□□ -1.79
MRPS18B-208	ENST00000472267	MT1L	Q93083	61 aa		3.83	□□□□□ -1.8
MRPS18B-208	ENST00000472267	MUC12	Q9UKN1	5478 aa		3.82	□□□□□ -1.8
MRPS18B-208	ENST00000472267	LCE3C	Q5T5A8	94 aa		3.78	□□□□□ -1.8
MRPS18B-208	ENST00000472267	KRTAP5-9	P26371	169 aa		3.75	□□□□□ -1.81
MRPS18B-208	ENST00000472267	KRTAP19-3	Q7Z4W3	81 aa		3.75	□□□□□ -1.81
MRPS18B-208	ENST00000472267	SPRR5	A0A1B0GTR4	108 aa		3.74	□□□□□ -1.81
MRPS18B-208	ENST00000472267	KRTAP6-3	Q3LI67	103 aa		3.71	□□□□□ -1.82
MRPS18B-208	ENST00000472267	MT1G	P13640	62 aa		3.7	□□□□□ -1.82
MRPS18B-208	ENST00000472267	MDN1	Q9NU22	5596 aa		3.68	□□□□□ -1.82
MRPS18B-208	ENST00000472267	MT1M	Q8N339	61 aa		3.68	□□□□□ -1.82
MRPS18B-208	ENST00000472267	SPRR2E	P22531	72 aa		3.67	□□□□□ -1.82
MRPS18B-208	ENST00000472267	SPRR2B	P35325	72 aa		3.67	□□□□□ -1.82
MRPS18B-208	ENST00000472267	SPRR2A	P35326	72 aa		3.67	□□□□□ -1.82
MRPS18B-208	ENST00000472267	LCE1A	Q5T7P2	110 aa		3.66	□□□□□ -1.82
MRPS18B-208	ENST00000472267	KRTAP4-3	Q9BYR4	195 aa		3.65	□□□□□ -1.83
MRPS18B-208	ENST00000472267	NEB	P20929	6669 aa		3.65	□□□□□ -1.83
MRPS18B-208	ENST00000472267	KRTAP9-6	A8MVA2	160 aa		3.58	□□□□□ -1.84
MRPS18B-208	ENST00000472267	SPRR2D	P22532	72 aa		3.53	□□□□□ -1.84
MRPS18B-208	ENST00000472267	KRTAP20-1	Q3LI63	56 aa		3.52	□□□□□ -1.85
MRPS18B-208	ENST00000472267	DST	Q03001	7570 aa	Known RBP	3.49	□□□□□ -1.85
MRPS18B-208	ENST00000472267	GPR98	Q8WXG9	6306 aa		3.43	□□□□□ -1.86
MRPS18B-208	ENST00000472267	MT3	P25713	68 aa		3.33	□□□□□ -1.88
MRPS18B-208	ENST00000472267	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.29	□□□□□ -1.88
MRPS18B-208	ENST00000472267	KRTAP2-3	P0C7H8	128 aa		3.28	□□□□□ -1.88
MRPS18B-208	ENST00000472267	KRTAP2-4	Q9BYR9	128 aa		3.28	□□□□□ -1.88
MRPS18B-208	ENST00000472267	KRTAP2-1	Q9BYU5	128 aa		3.28	□□□□□ -1.88
MRPS18B-208	ENST00000472267	MT1A	P04731	61 aa		3.24	□□□□□ -1.89
MRPS18B-208	ENST00000472267	KRTAP6-1	Q3LI64	71 aa		3.23	□□□□□ -1.89
MRPS18B-208	ENST00000472267	KRTAP2-2	Q9BYT5	123 aa		3.22	□□□□□ -1.89
MRPS18B-208	ENST00000472267	KRTAP5-4	Q6L8H1	288 aa		3.13	□□□□□ -1.91
MRPS18B-208	ENST00000472267	SYNE1	Q8NF91	8797 aa	Known RBP	3.12	□□□□□ -1.91
MRPS18B-208	ENST00000472267	MT4	P47944	62 aa		3.08	□□□□□ -1.92
MRPS18B-208	ENST00000472267	KRTAP12-4	P60329	112 aa		3.08	□□□□□ -1.92
MRPS18B-208	ENST00000472267	LCE1F	Q5T754	118 aa		3.01	□□□□□ -1.93
MRPS18B-208	ENST00000472267	KRTAP6-2	Q3LI66	62 aa		2.99	□□□□□ -1.93
MRPS18B-208	ENST00000472267	HMCN1	Q96RW7	5635 aa		2.98	□□□□□ -1.93
MRPS18B-208	ENST00000472267	KRTAP20-2	Q3LI61	65 aa		2.96	□□□□□ -1.94
MRPS18B-208	ENST00000472267	LCE1E	Q5T753	118 aa		2.94	□□□□□ -1.94
MRPS18B-208	ENST00000472267	INE1	O15225	51 aa		2.92	□□□□□ -1.94
MRPS18B-208	ENST00000472267	AHNAK2	Q8IVF2	5795 aa		2.89	□□□□□ -1.95
MRPS18B-208	ENST00000472267	KRTAP5-2	Q701N4	177 aa		2.84	□□□□□ -1.95
MRPS18B-208	ENST00000472267	LCE3D	Q9BYE3	92 aa		2.84	□□□□□ -1.95
MRPS18B-208	ENST00000472267	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.82	□□□□□ -1.96
MRPS18B-208	ENST00000472267	KRTAP5-11	Q6L8G4	156 aa		2.8	□□□□□ -1.96
MRPS18B-208	ENST00000472267	KRTAP5-10	Q6L8G5	202 aa		2.8	□□□□□ -1.96
MRPS18B-208	ENST00000472267	LCE3E	Q5T5B0	92 aa		2.76	□□□□□ -1.97
MRPS18B-208	ENST00000472267	KRTAP5-7	Q6L8G8	165 aa		2.76	□□□□□ -1.97
MRPS18B-208	ENST00000472267	OBSCN	Q5VST9	7968 aa		2.71	□□□□□ -1.98
MRPS18B-208	ENST00000472267	AHNAK	Q09666	5890 aa	Known RBP	2.61	□□□□□ -1.99
MRPS18B-208	ENST00000472267	MUC5AC	P98088	5654 aa		2.49	□□□□□ -2.01
MRPS18B-208	ENST00000472267	KRTAP5-1	Q6L8H4	278 aa		2.47	□□□□□ -2.01
MRPS18B-208	ENST00000472267	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.46	□□□□□ -2.02
MRPS18B-208	ENST00000472267	KRTAP5-8	O75690	187 aa		2.46	□□□□□ -2.02
MRPS18B-208	ENST00000472267	LCE1B	Q5T7P3	118 aa		2.45	□□□□□ -2.02
MRPS18B-208	ENST00000472267	PRM1	P04553	51 aa		2.42	□□□□□ -2.02
MRPS18B-208	ENST00000472267	KRTAP4-4	Q9BYR3	166 aa		2.36	□□□□□ -2.03
MRPS18B-208	ENST00000472267	LCE1C	Q5T751	118 aa		2.35	□□□□□ -2.03
MRPS18B-208	ENST00000472267	KRTAP21-2	Q3LI59	83 aa		2.09	□□□□□ -2.07
MRPS18B-208	ENST00000472267	PHGR1	C9JFL3	82 aa		1.79	□□□□□ -2.12
MRPS18B-208	ENST00000472267	MUC19	Q7Z5P9	8384 aa		1.6	□□□□□ -2.15
MRPS18B-208	ENST00000472267	KRTAP21-1	Q3LI58	79 aa		1.45	□□□□□ -2.18
MRPS18B-208	ENST00000472267	MUC16	Q8WXI7	14507 aa		1.19	□□□□□ -2.22

Retrieved 78 of 20,778 RNA–protein pairs in 150.6 ms