RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
CDHR3-209ENST00000472116 ATP5EP56381 51 aaPredicted RBP3.75□□□□□ -1.81
CDHR3-209ENST00000472116 TMEM258P61165 79 aa3.74□□□□□ -1.81
CDHR3-209ENST00000472116 DMAC1Q96GE9 116 aa3.7□□□□□ -1.82
CDHR3-209ENST00000472116 P0C880 135 aa3.69□□□□□ -1.82
CDHR3-209ENST00000472116 ACYP2P14621 99 aa3.69□□□□□ -1.82
CDHR3-209ENST00000472116 KRTAP20-2Q3LI61 65 aa3.69□□□□□ -1.82
CDHR3-209ENST00000472116 MT1MQ8N339 61 aa3.67□□□□□ -1.82
CDHR3-209ENST00000472116 AHNAKQ09666 5890 aaKnown RBP3.63□□□□□ -1.83
CDHR3-209ENST00000472116 CHKB-CPT1BH3BT56 60 aa3.62□□□□□ -1.83
CDHR3-209ENST00000472116 SPTSSBQ8NFR3 76 aa3.62□□□□□ -1.83
CDHR3-209ENST00000472116 SERP1Q9Y6X1 66 aa3.62□□□□□ -1.83
CDHR3-209ENST00000472116 SEC61GP60059 68 aa3.61□□□□□ -1.83
CDHR3-209ENST00000472116 COA5Q86WW8 74 aa3.61□□□□□ -1.83
CDHR3-209ENST00000472116 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
CDHR3-209ENST00000472116 RPS28P62857 69 aaKnown RBP3.59□□□□□ -1.83
CDHR3-209ENST00000472116 KRTAP4-3Q9BYR4 195 aa3.58□□□□□ -1.84
CDHR3-209ENST00000472116 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
CDHR3-209ENST00000472116 KRTAP12-4P60329 112 aa3.56□□□□□ -1.84
CDHR3-209ENST00000472116 KRTAP19-5Q3LI72 72 aa3.56□□□□□ -1.84
CDHR3-209ENST00000472116 CAMK2N1Q7Z7J9 78 aa3.54□□□□□ -1.84
CDHR3-209ENST00000472116 MT3P25713 68 aa3.53□□□□□ -1.84
CDHR3-209ENST00000472116 MT1LQ93083 61 aa3.53□□□□□ -1.84
CDHR3-209ENST00000472116 SMIM26A0A096LP01 95 aa3.51□□□□□ -1.85
CDHR3-209ENST00000472116 V9GYY9 64 aa3.51□□□□□ -1.85
CDHR3-209ENST00000472116 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
CDHR3-209ENST00000472116 A0A0D9SG42 100 aa3.48□□□□□ -1.85
CDHR3-209ENST00000472116 Q1T7F1 81 aa3.46□□□□□ -1.86
CDHR3-209ENST00000472116 PRR15LQ9BU68 103 aa3.46□□□□□ -1.86
CDHR3-209ENST00000472116 LINC01558Q9Y6Z2 57 aa3.46□□□□□ -1.86
CDHR3-209ENST00000472116 KRTAP5-8O75690 187 aa3.45□□□□□ -1.86
CDHR3-209ENST00000472116 A0A1B0GU69 56 aa3.44□□□□□ -1.86
CDHR3-209ENST00000472116 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
CDHR3-209ENST00000472116 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
CDHR3-209ENST00000472116 A0A1B0GU33 70 aa3.36□□□□□ -1.87
CDHR3-209ENST00000472116 PSPHP1O15172 72 aa3.35□□□□□ -1.87
CDHR3-209ENST00000472116 UQCR11O14957 56 aa3.34□□□□□ -1.87
CDHR3-209ENST00000472116 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
CDHR3-209ENST00000472116 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
CDHR3-209ENST00000472116 A6NED7 52 aa3.29□□□□□ -1.88
CDHR3-209ENST00000472116 PRAC1Q96KF2 57 aa3.28□□□□□ -1.88
CDHR3-209ENST00000472116 C10orf95Q9H7T3 257 aa3.28□□□□□ -1.88
CDHR3-209ENST00000472116 MIR22HGQ0VDD5 57 aa3.27□□□□□ -1.89
CDHR3-209ENST00000472116 SPATA8Q6RVD6 105 aa3.25□□□□□ -1.89
CDHR3-209ENST00000472116 KRTAP13-4Q3LI77 160 aa3.24□□□□□ -1.89
CDHR3-209ENST00000472116 KRTAP5-2Q701N4 177 aa3.24□□□□□ -1.89
CDHR3-209ENST00000472116 CDC42SE1Q9NRR8 79 aa3.23□□□□□ -1.89
CDHR3-209ENST00000472116 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
CDHR3-209ENST00000472116 K7ERS5 55 aa3.21□□□□□ -1.9
CDHR3-209ENST00000472116 LCE3AQ5TA76 89 aa3.19□□□□□ -1.9
CDHR3-209ENST00000472116 BRK1Q8WUW1 75 aa3.18□□□□□ -1.9
CDHR3-209ENST00000472116 A8MU10 97 aa3.17□□□□□ -1.9
CDHR3-209ENST00000472116 KRTAP12-1P59990 96 aa3.15□□□□□ -1.91
CDHR3-209ENST00000472116 SPINT4Q6UDR6 99 aa3.14□□□□□ -1.91
CDHR3-209ENST00000472116 LCE3CQ5T5A8 94 aa3.12□□□□□ -1.91
CDHR3-209ENST00000472116 PRO0628Q9UI54 55 aa3.1□□□□□ -1.91
CDHR3-209ENST00000472116 KRTAP12-3P60328 96 aa3.08□□□□□ -1.92
CDHR3-209ENST00000472116 TNP1P09430 55 aa3.07□□□□□ -1.92
CDHR3-209ENST00000472116 PMAIP1Q13794 54 aa3.02□□□□□ -1.93
CDHR3-209ENST00000472116 MT1AP04731 61 aa3.01□□□□□ -1.93
CDHR3-209ENST00000472116 KRTAP6-1Q3LI64 71 aa3.01□□□□□ -1.93
CDHR3-209ENST00000472116 KRTAP6-2Q3LI66 62 aa3.01□□□□□ -1.93
CDHR3-209ENST00000472116 ROMO1P60602 79 aa3□□□□□ -1.93
CDHR3-209ENST00000472116 KRTAP25-1Q3LHN0 102 aa2.96□□□□□ -1.94
CDHR3-209ENST00000472116 NDUFAF8A1L188 74 aa2.95□□□□□ -1.94
CDHR3-209ENST00000472116 KTN1-AS1Q86SY8 53 aa2.88□□□□□ -1.95
CDHR3-209ENST00000472116 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
CDHR3-209ENST00000472116 LUZP6Q538Z0 58 aa2.73□□□□□ -1.97
CDHR3-209ENST00000472116 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
CDHR3-209ENST00000472116 LCE1CQ5T751 118 aa2.57□□□□□ -2
CDHR3-209ENST00000472116 PHGR1C9JFL3 82 aa2.54□□□□□ -2
CDHR3-209ENST00000472116 LCE3DQ9BYE3 92 aa2.26□□□□□ -2.05
CDHR3-209ENST00000472116 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
CDHR3-209ENST00000472116 INE1O15225 51 aa1.99□□□□□ -2.09
CDHR3-209ENST00000472116 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
CDHR3-209ENST00000472116 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
CDHR3-209ENST00000472116 PRM1P04553 51 aa1.52□□□□□ -2.17
CDHR3-209ENST00000472116 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 60.2 ms