RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 KRTAP2-3P0C7H8 128 aa5.81□□□□□ -1.48
CALD1-215ENST00000472096 KRTAP2-4Q9BYR9 128 aa5.81□□□□□ -1.48
CALD1-215ENST00000472096 SMIM26A0A096LP01 95 aa5.76□□□□□ -1.49
CALD1-215ENST00000472096 SPRR2DP22532 72 aa5.76□□□□□ -1.49
CALD1-215ENST00000472096 TMEM258P61165 79 aa5.74□□□□□ -1.49
CALD1-215ENST00000472096 A8MU10 97 aa5.73□□□□□ -1.49
CALD1-215ENST00000472096 PRR15LQ9BU68 103 aa5.72□□□□□ -1.49
CALD1-215ENST00000472096 LINC01558Q9Y6Z2 57 aa5.69□□□□□ -1.5
CALD1-215ENST00000472096 KRTAP19-7Q3SYF9 63 aa5.66□□□□□ -1.5
CALD1-215ENST00000472096 KRTAP2-1Q9BYU5 128 aa5.64□□□□□ -1.51
CALD1-215ENST00000472096 MT1EP04732 61 aa5.61□□□□□ -1.51
CALD1-215ENST00000472096 LCE1EQ5T753 118 aa5.6□□□□□ -1.51
CALD1-215ENST00000472096 LCE3CQ5T5A8 94 aa5.56□□□□□ -1.52
CALD1-215ENST00000472096 C10orf95Q9H7T3 257 aa5.56□□□□□ -1.52
CALD1-215ENST00000472096 KRTAP19-3Q7Z4W3 81 aa5.54□□□□□ -1.52
CALD1-215ENST00000472096 UQCR11O14957 56 aa5.53□□□□□ -1.52
CALD1-215ENST00000472096 KRTAP19-5Q3LI72 72 aa5.53□□□□□ -1.52
CALD1-215ENST00000472096 TNP1P09430 55 aa5.5□□□□□ -1.53
CALD1-215ENST00000472096 LCE3AQ5TA76 89 aa5.47□□□□□ -1.53
CALD1-215ENST00000472096 KRTAP5-11Q6L8G4 156 aa5.46□□□□□ -1.54
CALD1-215ENST00000472096 MT1GP13640 62 aa5.41□□□□□ -1.54
CALD1-215ENST00000472096 MIR22HGQ0VDD5 57 aa5.41□□□□□ -1.54
CALD1-215ENST00000472096 V9GYY9 64 aa5.39□□□□□ -1.55
CALD1-215ENST00000472096 MT1LQ93083 61 aa5.38□□□□□ -1.55
CALD1-215ENST00000472096 DSTQ03001 7570 aaKnown RBP5.37□□□□□ -1.55
CALD1-215ENST00000472096 PSPHP1O15172 72 aa5.36□□□□□ -1.55
CALD1-215ENST00000472096 Q1T7F1 81 aa5.36□□□□□ -1.55
CALD1-215ENST00000472096 PP632Q6XCG6 107 aa5.36□□□□□ -1.55
CALD1-215ENST00000472096 MT1MQ8N339 61 aa5.34□□□□□ -1.55
CALD1-215ENST00000472096 K7ERS5 55 aa5.28□□□□□ -1.56
CALD1-215ENST00000472096 KRTAP12-3P60328 96 aa5.25□□□□□ -1.57
CALD1-215ENST00000472096 KRTAP25-1Q3LHN0 102 aa5.25□□□□□ -1.57
CALD1-215ENST00000472096 KRTAP4-3Q9BYR4 195 aa5.2□□□□□ -1.58
CALD1-215ENST00000472096 A6NED7 52 aa5.18□□□□□ -1.58
CALD1-215ENST00000472096 KRTAP9-6A8MVA2 160 aa5.14□□□□□ -1.59
CALD1-215ENST00000472096 RPS28P62857 69 aaKnown RBP5.13□□□□□ -1.59
CALD1-215ENST00000472096 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.1□□□□□ -1.59
CALD1-215ENST00000472096 LCE3EQ5T5B0 92 aa5.08□□□□□ -1.6
CALD1-215ENST00000472096 KRTAP5-4Q6L8H1 288 aa5.03□□□□□ -1.6
CALD1-215ENST00000472096 CDC42SE1Q9NRR8 79 aa5.03□□□□□ -1.6
CALD1-215ENST00000472096 MT4P47944 62 aa5.02□□□□□ -1.61
CALD1-215ENST00000472096 HMCN1Q96RW7 5635 aa4.97□□□□□ -1.61
CALD1-215ENST00000472096 ROMO1P60602 79 aa4.95□□□□□ -1.62
CALD1-215ENST00000472096 GPR98Q8WXG9 6306 aa4.93□□□□□ -1.62
CALD1-215ENST00000472096 KRTAP5-5Q701N2 237 aaPredicted RBP4.89□□□□□ -1.63
CALD1-215ENST00000472096 AHNAK2Q8IVF2 5795 aa4.8□□□□□ -1.64
CALD1-215ENST00000472096 KRTAP20-2Q3LI61 65 aa4.74□□□□□ -1.65
CALD1-215ENST00000472096 SPRR5A0A1B0GTR4 108 aa4.72□□□□□ -1.65
CALD1-215ENST00000472096 KRTAP12-4P60329 112 aa4.7□□□□□ -1.66
CALD1-215ENST00000472096 SYNE1Q8NF91 8797 aaKnown RBP4.67□□□□□ -1.66
CALD1-215ENST00000472096 KRTAP5-10Q6L8G5 202 aa4.67□□□□□ -1.66
CALD1-215ENST00000472096 MT1AP04731 61 aa4.58□□□□□ -1.68
CALD1-215ENST00000472096 KRTAP6-1Q3LI64 71 aa4.55□□□□□ -1.68
CALD1-215ENST00000472096 BRK1Q8WUW1 75 aa4.54□□□□□ -1.68
CALD1-215ENST00000472096 KRTAP5-1Q6L8H4 278 aa4.52□□□□□ -1.69
CALD1-215ENST00000472096 KRTAP5-7Q6L8G8 165 aa4.47□□□□□ -1.69
CALD1-215ENST00000472096 KRTAP5-2Q701N4 177 aa4.44□□□□□ -1.7
CALD1-215ENST00000472096 KRTAP6-2Q3LI66 62 aa4.31□□□□□ -1.72
CALD1-215ENST00000472096 KRTAP4-4Q9BYR3 166 aa4.27□□□□□ -1.73
CALD1-215ENST00000472096 PMAIP1Q13794 54 aa4.24□□□□□ -1.73
CALD1-215ENST00000472096 LCE3DQ9BYE3 92 aa4.24□□□□□ -1.73
CALD1-215ENST00000472096 KRTAP5-8O75690 187 aa4.16□□□□□ -1.74
CALD1-215ENST00000472096 OBSCNQ5VST9 7968 aa4.07□□□□□ -1.76
CALD1-215ENST00000472096 PRO0628Q9UI54 55 aa3.99□□□□□ -1.77
CALD1-215ENST00000472096 MUC5ACP98088 5654 aa3.88□□□□□ -1.79
CALD1-215ENST00000472096 AHNAKQ09666 5890 aaKnown RBP3.88□□□□□ -1.79
CALD1-215ENST00000472096 MUC5BQ9HC84 5762 aaPredicted RBP3.87□□□□□ -1.79
CALD1-215ENST00000472096 KTN1-AS1Q86SY8 53 aa3.83□□□□□ -1.8
CALD1-215ENST00000472096 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
CALD1-215ENST00000472096 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
CALD1-215ENST00000472096 LUZP6Q538Z0 58 aa3.64□□□□□ -1.83
CALD1-215ENST00000472096 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
CALD1-215ENST00000472096 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
CALD1-215ENST00000472096 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
CALD1-215ENST00000472096 PRM1P04553 51 aa2.55□□□□□ -2
CALD1-215ENST00000472096 INE1O15225 51 aa2.25□□□□□ -2.05
CALD1-215ENST00000472096 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
CALD1-215ENST00000472096 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 11.9 ms