RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 SPINT4Q6UDR6 99 aa6.44□□□□□ -1.38
SORT1-203ENST00000471996 A0A1B0GU69 56 aa6.43□□□□□ -1.38
SORT1-203ENST00000471996 SMIM26A0A096LP01 95 aa6.4□□□□□ -1.38
SORT1-203ENST00000471996 KRTAP12-1P59990 96 aa6.38□□□□□ -1.39
SORT1-203ENST00000471996 ATP5EP56381 51 aaPredicted RBP6.34□□□□□ -1.39
SORT1-203ENST00000471996 KRTAP12-4P60329 112 aa6.34□□□□□ -1.39
SORT1-203ENST00000471996 KRTAP5-5Q701N2 237 aaPredicted RBP6.34□□□□□ -1.39
SORT1-203ENST00000471996 KRTAP4-7Q9BYR0 210 aa6.32□□□□□ -1.4
SORT1-203ENST00000471996 C10orf95Q9H7T3 257 aa6.32□□□□□ -1.4
SORT1-203ENST00000471996 CCDC179H3BU77 68 aa6.3□□□□□ -1.4
SORT1-203ENST00000471996 SYNE1Q8NF91 8797 aaKnown RBP6.29□□□□□ -1.4
SORT1-203ENST00000471996 PRR15LQ9BU68 103 aa6.28□□□□□ -1.4
SORT1-203ENST00000471996 LCE3AQ5TA76 89 aa6.25□□□□□ -1.41
SORT1-203ENST00000471996 AHNAKQ09666 5890 aaKnown RBP6.24□□□□□ -1.41
SORT1-203ENST00000471996 A8MU10 97 aa6.23□□□□□ -1.41
SORT1-203ENST00000471996 KRTAP4-11Q9BYQ6 195 aa6.2□□□□□ -1.42
SORT1-203ENST00000471996 LINC01558Q9Y6Z2 57 aa6.19□□□□□ -1.42
SORT1-203ENST00000471996 MUC5ACP98088 5654 aa6.18□□□□□ -1.42
SORT1-203ENST00000471996 TNP1P09430 55 aa6.15□□□□□ -1.42
SORT1-203ENST00000471996 TMEM258P61165 79 aa6.14□□□□□ -1.43
SORT1-203ENST00000471996 MUC5BQ9HC84 5762 aaPredicted RBP6.12□□□□□ -1.43
SORT1-203ENST00000471996 UQCR11O14957 56 aa6.06□□□□□ -1.44
SORT1-203ENST00000471996 KRTAP5-8O75690 187 aa6.03□□□□□ -1.44
SORT1-203ENST00000471996 LOC100996750A0A140TA64 210 aa6.02□□□□□ -1.45
SORT1-203ENST00000471996 KRTAP12-3P60328 96 aa6.01□□□□□ -1.45
SORT1-203ENST00000471996 KRTAP5-2Q701N4 177 aa5.95□□□□□ -1.46
SORT1-203ENST00000471996 MIR22HGQ0VDD5 57 aa5.89□□□□□ -1.47
SORT1-203ENST00000471996 V9GYY9 64 aa5.87□□□□□ -1.47
SORT1-203ENST00000471996 K7ERS5 55 aa5.84□□□□□ -1.47
SORT1-203ENST00000471996 KRTAP9-9Q9BYP9 154 aa5.82□□□□□ -1.48
SORT1-203ENST00000471996 KRTAP25-1Q3LHN0 102 aa5.81□□□□□ -1.48
SORT1-203ENST00000471996 OBSCNQ5VST9 7968 aa5.79□□□□□ -1.48
SORT1-203ENST00000471996 Q1T7F1 81 aa5.78□□□□□ -1.48
SORT1-203ENST00000471996 PSPHP1O15172 72 aa5.73□□□□□ -1.49
SORT1-203ENST00000471996 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
SORT1-203ENST00000471996 MT1AP04731 61 aa5.66□□□□□ -1.5
SORT1-203ENST00000471996 KRTAP19-4Q3LI73 84 aa5.66□□□□□ -1.5
SORT1-203ENST00000471996 KRTAP23-1A1A580 65 aa5.65□□□□□ -1.5
SORT1-203ENST00000471996 A6NED7 52 aa5.57□□□□□ -1.52
SORT1-203ENST00000471996 KRTAP6-2Q3LI66 62 aa5.57□□□□□ -1.52
SORT1-203ENST00000471996 KRTAP9-4Q9BYQ2 154 aa5.56□□□□□ -1.52
SORT1-203ENST00000471996 RPS28P62857 69 aaKnown RBP5.5□□□□□ -1.53
SORT1-203ENST00000471996 CDC42SE1Q9NRR8 79 aa5.49□□□□□ -1.53
SORT1-203ENST00000471996 KRTAP5-1Q6L8H4 278 aa5.48□□□□□ -1.53
SORT1-203ENST00000471996 KRTAP15-1Q3LI76 137 aa5.47□□□□□ -1.53
SORT1-203ENST00000471996 LCE3CQ5T5A8 94 aa5.45□□□□□ -1.54
SORT1-203ENST00000471996 ROMO1P60602 79 aa5.39□□□□□ -1.55
SORT1-203ENST00000471996 PCP4P48539 62 aa5.32□□□□□ -1.56
SORT1-203ENST00000471996 MT3P25713 68 aa5.22□□□□□ -1.57
SORT1-203ENST00000471996 KRTAP9-6A8MVA2 160 aa5.18□□□□□ -1.58
SORT1-203ENST00000471996 LCE1EQ5T753 118 aa4.98□□□□□ -1.61
SORT1-203ENST00000471996 KRTAP4-2Q9BYR5 136 aa4.77□□□□□ -1.65
SORT1-203ENST00000471996 BRK1Q8WUW1 75 aa4.75□□□□□ -1.65
SORT1-203ENST00000471996 LCE1BQ5T7P3 118 aa4.74□□□□□ -1.65
SORT1-203ENST00000471996 LCE1CQ5T751 118 aa4.62□□□□□ -1.67
SORT1-203ENST00000471996 KRTAP4-12Q9BQ66 201 aa4.58□□□□□ -1.68
SORT1-203ENST00000471996 PMAIP1Q13794 54 aa4.49□□□□□ -1.69
SORT1-203ENST00000471996 KRTAP5-11Q6L8G4 156 aa4.38□□□□□ -1.71
SORT1-203ENST00000471996 LCE1FQ5T754 118 aa4.3□□□□□ -1.72
SORT1-203ENST00000471996 PHGR1C9JFL3 82 aa4.25□□□□□ -1.73
SORT1-203ENST00000471996 PRAC1Q96KF2 57 aa4.25□□□□□ -1.73
SORT1-203ENST00000471996 SVIPQ8NHG7 77 aa4.23□□□□□ -1.73
SORT1-203ENST00000471996 PRO0628Q9UI54 55 aa4.13□□□□□ -1.75
SORT1-203ENST00000471996 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.11□□□□□ -1.75
SORT1-203ENST00000471996 H3BS24 57 aa3.96□□□□□ -1.78
SORT1-203ENST00000471996 KTN1-AS1Q86SY8 53 aa3.96□□□□□ -1.78
SORT1-203ENST00000471996 LCE3DQ9BYE3 92 aa3.89□□□□□ -1.79
SORT1-203ENST00000471996 KRTAP21-2Q3LI59 83 aa3.76□□□□□ -1.81
SORT1-203ENST00000471996 LUZP6Q538Z0 58 aa3.72□□□□□ -1.81
SORT1-203ENST00000471996 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
SORT1-203ENST00000471996 MUC19Q7Z5P9 8384 aa3.65□□□□□ -1.83
SORT1-203ENST00000471996 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
SORT1-203ENST00000471996 KRTAP21-1Q3LI58 79 aa3.24□□□□□ -1.89
SORT1-203ENST00000471996 NDUFAF8A1L188 74 aa2.85□□□□□ -1.95
SORT1-203ENST00000471996 A0A0A0MQY5 61 aa2.8□□□□□ -1.96
SORT1-203ENST00000471996 PRM1P04553 51 aa2.72□□□□□ -1.97
SORT1-203ENST00000471996 MUC16Q8WXI7 14507 aa2.54□□□□□ -2
SORT1-203ENST00000471996 INE1O15225 51 aa2.4□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 843 ms