RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 CCDC179H3BU77 68 aa3.58□□□□□ -1.84
GGPS1-204ENST00000471812 KRTAP12-1P59990 96 aa3.58□□□□□ -1.84
GGPS1-204ENST00000471812 KRTAP19-7Q3SYF9 63 aa3.58□□□□□ -1.84
GGPS1-204ENST00000471812 KRTAP5-4Q6L8H1 288 aa3.57□□□□□ -1.84
GGPS1-204ENST00000471812 A0A1B0GU33 70 aa3.56□□□□□ -1.84
GGPS1-204ENST00000471812 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
GGPS1-204ENST00000471812 KRTAP2-1Q9BYU5 128 aa3.56□□□□□ -1.84
GGPS1-204ENST00000471812 A8MU10 97 aa3.55□□□□□ -1.84
GGPS1-204ENST00000471812 SPINT4Q6UDR6 99 aa3.54□□□□□ -1.84
GGPS1-204ENST00000471812 ANAPC13Q9BS18 74 aa3.54□□□□□ -1.84
GGPS1-204ENST00000471812 SERP1Q9Y6X1 66 aa3.54□□□□□ -1.84
GGPS1-204ENST00000471812 MT1EP04732 61 aa3.53□□□□□ -1.84
GGPS1-204ENST00000471812 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
GGPS1-204ENST00000471812 KRTAP19-5Q3LI72 72 aa3.49□□□□□ -1.85
GGPS1-204ENST00000471812 A0A1B0GU69 56 aa3.47□□□□□ -1.85
GGPS1-204ENST00000471812 KRTAP19-3Q7Z4W3 81 aa3.46□□□□□ -1.86
GGPS1-204ENST00000471812 C10orf95Q9H7T3 257 aa3.45□□□□□ -1.86
GGPS1-204ENST00000471812 DSTQ03001 7570 aaKnown RBP3.41□□□□□ -1.86
GGPS1-204ENST00000471812 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
GGPS1-204ENST00000471812 LCE3AQ5TA76 89 aa3.41□□□□□ -1.86
GGPS1-204ENST00000471812 SMIM26A0A096LP01 95 aa3.4□□□□□ -1.87
GGPS1-204ENST00000471812 MT1LQ93083 61 aa3.38□□□□□ -1.87
GGPS1-204ENST00000471812 KRTAP4-3Q9BYR4 195 aa3.38□□□□□ -1.87
GGPS1-204ENST00000471812 LINC01558Q9Y6Z2 57 aa3.37□□□□□ -1.87
GGPS1-204ENST00000471812 MT1MQ8N339 61 aa3.36□□□□□ -1.87
GGPS1-204ENST00000471812 ATP5EP56381 51 aaPredicted RBP3.35□□□□□ -1.87
GGPS1-204ENST00000471812 MT1GP13640 62 aa3.33□□□□□ -1.88
GGPS1-204ENST00000471812 TMEM258P61165 79 aa3.31□□□□□ -1.88
GGPS1-204ENST00000471812 TNP1P09430 55 aa3.3□□□□□ -1.88
GGPS1-204ENST00000471812 PRR15LQ9BU68 103 aa3.29□□□□□ -1.88
GGPS1-204ENST00000471812 PP632Q6XCG6 107 aa3.24□□□□□ -1.89
GGPS1-204ENST00000471812 UQCR11O14957 56 aa3.23□□□□□ -1.89
GGPS1-204ENST00000471812 MT4P47944 62 aa3.22□□□□□ -1.89
GGPS1-204ENST00000471812 KRTAP12-3P60328 96 aa3.22□□□□□ -1.89
GGPS1-204ENST00000471812 PSPHP1O15172 72 aa3.2□□□□□ -1.9
GGPS1-204ENST00000471812 MIR22HGQ0VDD5 57 aa3.2□□□□□ -1.9
GGPS1-204ENST00000471812 HMCN1Q96RW7 5635 aa3.18□□□□□ -1.9
GGPS1-204ENST00000471812 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
GGPS1-204ENST00000471812 GPR98Q8WXG9 6306 aa3.16□□□□□ -1.9
GGPS1-204ENST00000471812 Q1T7F1 81 aa3.13□□□□□ -1.91
GGPS1-204ENST00000471812 AHNAK2Q8IVF2 5795 aa3.11□□□□□ -1.91
GGPS1-204ENST00000471812 KRTAP25-1Q3LHN0 102 aa3.1□□□□□ -1.91
GGPS1-204ENST00000471812 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
GGPS1-204ENST00000471812 V9GYY9 64 aa3.05□□□□□ -1.92
GGPS1-204ENST00000471812 SYNE1Q8NF91 8797 aaKnown RBP3.03□□□□□ -1.92
GGPS1-204ENST00000471812 A6NED7 52 aa3.03□□□□□ -1.92
GGPS1-204ENST00000471812 K7ERS5 55 aa3.01□□□□□ -1.93
GGPS1-204ENST00000471812 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
GGPS1-204ENST00000471812 KRTAP5-10Q6L8G5 202 aa3.01□□□□□ -1.93
GGPS1-204ENST00000471812 KRTAP5-2Q701N4 177 aa2.96□□□□□ -1.94
GGPS1-204ENST00000471812 ROMO1P60602 79 aa2.92□□□□□ -1.94
GGPS1-204ENST00000471812 RPS28P62857 69 aaKnown RBP2.92□□□□□ -1.94
GGPS1-204ENST00000471812 CDC42SE1Q9NRR8 79 aa2.92□□□□□ -1.94
GGPS1-204ENST00000471812 SPRR5A0A1B0GTR4 108 aa2.91□□□□□ -1.94
GGPS1-204ENST00000471812 KRTAP12-4P60329 112 aa2.89□□□□□ -1.95
GGPS1-204ENST00000471812 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
GGPS1-204ENST00000471812 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
GGPS1-204ENST00000471812 LUZP6Q538Z0 58 aa2.87□□□□□ -1.95
GGPS1-204ENST00000471812 KRTAP5-7Q6L8G8 165 aa2.85□□□□□ -1.95
GGPS1-204ENST00000471812 MT1AP04731 61 aa2.84□□□□□ -1.95
GGPS1-204ENST00000471812 PRO0628Q9UI54 55 aa2.77□□□□□ -1.97
GGPS1-204ENST00000471812 KRTAP6-2Q3LI66 62 aa2.73□□□□□ -1.97
GGPS1-204ENST00000471812 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
GGPS1-204ENST00000471812 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
GGPS1-204ENST00000471812 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
GGPS1-204ENST00000471812 BRK1Q8WUW1 75 aa2.6□□□□□ -1.99
GGPS1-204ENST00000471812 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2
GGPS1-204ENST00000471812 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
GGPS1-204ENST00000471812 AHNAKQ09666 5890 aaKnown RBP2.51□□□□□ -2.01
GGPS1-204ENST00000471812 PMAIP1Q13794 54 aa2.41□□□□□ -2.02
GGPS1-204ENST00000471812 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
GGPS1-204ENST00000471812 KTN1-AS1Q86SY8 53 aa2.12□□□□□ -2.07
GGPS1-204ENST00000471812 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
GGPS1-204ENST00000471812 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
GGPS1-204ENST00000471812 PRM1P04553 51 aa1.55□□□□□ -2.16
GGPS1-204ENST00000471812 INE1O15225 51 aa1.35□□□□□ -2.19
GGPS1-204ENST00000471812 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
GGPS1-204ENST00000471812 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 150.8 ms