RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 CHKB-CPT1BH3BT56 60 aa0.72□□□□□ -2.29
LRCH3-213ENST00000471667 UQCRQO14949 82 aa0.72□□□□□ -2.29
LRCH3-213ENST00000471667 APOC3P02656 99 aa0.72□□□□□ -2.29
LRCH3-213ENST00000471667 DMAC1Q96GE9 116 aa0.72□□□□□ -2.29
LRCH3-213ENST00000471667 CLLU1Q5K131 121 aa0.71□□□□□ -2.3
LRCH3-213ENST00000471667 DLEU1O43261 78 aa0.7□□□□□ -2.3
LRCH3-213ENST00000471667 COX8AP10176 69 aa0.7□□□□□ -2.3
LRCH3-213ENST00000471667 K7ERS5 55 aa0.69□□□□□ -2.3
LRCH3-213ENST00000471667 MP68P56378 58 aa0.69□□□□□ -2.3
LRCH3-213ENST00000471667 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
LRCH3-213ENST00000471667 A0A1B0GU33 70 aa0.68□□□□□ -2.3
LRCH3-213ENST00000471667 PRO0628Q9UI54 55 aa0.68□□□□□ -2.3
LRCH3-213ENST00000471667 K7ERJ3 54 aa0.67□□□□□ -2.3
LRCH3-213ENST00000471667 FXYD2P54710 66 aa0.67□□□□□ -2.3
LRCH3-213ENST00000471667 SERP1Q9Y6X1 66 aa0.66□□□□□ -2.3
LRCH3-213ENST00000471667 FAM240AA0A1B0GVK7 77 aa0.65□□□□□ -2.31
LRCH3-213ENST00000471667 HIST1H2BKO60814 126 aa0.65□□□□□ -2.31
LRCH3-213ENST00000471667 HIST1H2BJP06899 126 aa0.65□□□□□ -2.31
LRCH3-213ENST00000471667 HIST1H2BOP23527 126 aa0.65□□□□□ -2.31
LRCH3-213ENST00000471667 HIST1H2BBP33778 126 aa0.65□□□□□ -2.31
LRCH3-213ENST00000471667 HIST1H2BDP58876 126 aa0.65□□□□□ -2.31
LRCH3-213ENST00000471667 HIST1H2BCP62807 126 aa0.65□□□□□ -2.31
LRCH3-213ENST00000471667 HIST2H2BEQ16778 126 aa0.65□□□□□ -2.31
LRCH3-213ENST00000471667 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.65□□□□□ -2.31
LRCH3-213ENST00000471667 HIST1H2BHQ93079 126 aa0.65□□□□□ -2.31
LRCH3-213ENST00000471667 HIST1H2BNQ99877 126 aa0.65□□□□□ -2.31
LRCH3-213ENST00000471667 HIST1H2BMQ99879 126 aa0.65□□□□□ -2.31
LRCH3-213ENST00000471667 A6NED7 52 aa0.64□□□□□ -2.31
LRCH3-213ENST00000471667 SPATA8Q6RVD6 105 aa0.64□□□□□ -2.31
LRCH3-213ENST00000471667 C14orf144Q96I85 54 aa0.64□□□□□ -2.31
LRCH3-213ENST00000471667 TAX1BP3O14907 124 aa0.63□□□□□ -2.31
LRCH3-213ENST00000471667 H7BZZ5 65 aa0.62□□□□□ -2.31
LRCH3-213ENST00000471667 S100A2P29034 98 aa0.62□□□□□ -2.31
LRCH3-213ENST00000471667 HSD52Q0P140 79 aa0.62□□□□□ -2.31
LRCH3-213ENST00000471667 ANAPC13Q9BS18 74 aa0.61□□□□□ -2.31
LRCH3-213ENST00000471667 H3BT86 120 aa0.6□□□□□ -2.31
LRCH3-213ENST00000471667 H3BPC8 53 aa0.59□□□□□ -2.31
LRCH3-213ENST00000471667 SPATA45Q537H7 98 aa0.59□□□□□ -2.31
LRCH3-213ENST00000471667 SERP2Q8N6R1 65 aa0.57□□□□□ -2.32
LRCH3-213ENST00000471667 V9GYY9 64 aa0.57□□□□□ -2.32
LRCH3-213ENST00000471667 HIST1H4AP62805 103 aaKnown RBP0.56□□□□□ -2.32
LRCH3-213ENST00000471667 S100A1P23297 94 aa0.54□□□□□ -2.32
LRCH3-213ENST00000471667 PRR15LQ9BU68 103 aa0.51□□□□□ -2.33
LRCH3-213ENST00000471667 S100A6P06703 90 aa0.5□□□□□ -2.33
LRCH3-213ENST00000471667 RPS28P62857 69 aaKnown RBP0.5□□□□□ -2.33
LRCH3-213ENST00000471667 ATP5EP2Q5VTU8 51 aa0.5□□□□□ -2.33
LRCH3-213ENST00000471667 M0R143 59 aa0.47□□□□□ -2.33
LRCH3-213ENST00000471667 COA5Q86WW8 74 aa0.46□□□□□ -2.34
LRCH3-213ENST00000471667 UQCR10Q9UDW1 63 aa0.46□□□□□ -2.34
LRCH3-213ENST00000471667 A0A1B0GU69 56 aa0.44□□□□□ -2.34
LRCH3-213ENST00000471667 TMEM258P61165 79 aa0.38□□□□□ -2.35
LRCH3-213ENST00000471667 Q1T7F1 81 aa0.34□□□□□ -2.36
LRCH3-213ENST00000471667 KTN1-AS1Q86SY8 53 aa0.33□□□□□ -2.36
LRCH3-213ENST00000471667 LINC00643Q86TS7 51 aa0.33□□□□□ -2.36
LRCH3-213ENST00000471667 SMIM20Q8N5G0 67 aa0.3□□□□□ -2.36
LRCH3-213ENST00000471667 SNURFQ9Y675 71 aa0.29□□□□□ -2.36
LRCH3-213ENST00000471667 UQCR11O14957 56 aa0.28□□□□□ -2.36
LRCH3-213ENST00000471667 ETDBQ3ZM63 59 aa0.28□□□□□ -2.36
LRCH3-213ENST00000471667 F8W1H4 67 aa0.27□□□□□ -2.37
LRCH3-213ENST00000471667 CDC42SE1Q9NRR8 79 aa0.27□□□□□ -2.37
LRCH3-213ENST00000471667 PYY3Q5JQD4 70 aa0.26□□□□□ -2.37
LRCH3-213ENST00000471667 GTF2H5Q6ZYL4 71 aa0.25□□□□□ -2.37
LRCH3-213ENST00000471667 MIR22HGQ0VDD5 57 aa0.21□□□□□ -2.38
LRCH3-213ENST00000471667 ROMO1P60602 79 aa0.18□□□□□ -2.38
LRCH3-213ENST00000471667 COL5A1-AS1Q5SY13 56 aa0.15□□□□□ -2.39
LRCH3-213ENST00000471667 INE1O15225 51 aa0.12□□□□□ -2.39
LRCH3-213ENST00000471667 LINC01558Q9Y6Z2 57 aa0.12□□□□□ -2.39
LRCH3-213ENST00000471667 PMAIP1Q13794 54 aa0.1□□□□□ -2.39
LRCH3-213ENST00000471667 J3QR89 54 aa0.08□□□□□ -2.4
LRCH3-213ENST00000471667 PRM1P04553 51 aa0.04□□□□□ -2.4
LRCH3-213ENST00000471667 SMIM6P0DI80 62 aa0.04□□□□□ -2.4
LRCH3-213ENST00000471667 ATP5EP56381 51 aaPredicted RBP-0.04□□□□□ -2.42
LRCH3-213ENST00000471667 COX7CP15954 63 aa-0.05□□□□□ -2.42
LRCH3-213ENST00000471667 A0A1B0GV90 55 aa-0.18□□□□□ -2.44
LRCH3-213ENST00000471667 K7ERU9 68 aa-0.18□□□□□ -2.44
LRCH3-213ENST00000471667 BRK1Q8WUW1 75 aa-0.23□□□□□ -2.45
LRCH3-213ENST00000471667 CCDC179H3BU77 68 aa-0.31□□□□□ -2.46
LRCH3-213ENST00000471667 LOC105371267A0A1B0GV96 52 aa-0.36□□□□□ -2.47
Retrieved 78 of 20,778 RNA–protein pairs in 6.5 ms