RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 MT1LQ93083 61 aa6.54□□□□□ -1.36
COL20A1-205ENST00000471582 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.5□□□□□ -1.37
COL20A1-205ENST00000471582 SYNE2Q8WXH0 6885 aaKnown RBP6.5□□□□□ -1.37
COL20A1-205ENST00000471582 INE1O15225 51 aa6.44□□□□□ -1.38
COL20A1-205ENST00000471582 KRTAP9-6A8MVA2 160 aa6.42□□□□□ -1.38
COL20A1-205ENST00000471582 KRTAP4-7Q9BYR0 210 aa6.4□□□□□ -1.39
COL20A1-205ENST00000471582 MUC12Q9UKN1 5478 aa6.32□□□□□ -1.4
COL20A1-205ENST00000471582 SPRR2FQ96RM1 72 aa6.32□□□□□ -1.4
COL20A1-205ENST00000471582 KRTAP5-9P26371 169 aa6.29□□□□□ -1.4
COL20A1-205ENST00000471582 KRTAP6-3Q3LI67 103 aa6.25□□□□□ -1.41
COL20A1-205ENST00000471582 KRTAP19-3Q7Z4W3 81 aa6.24□□□□□ -1.41
COL20A1-205ENST00000471582 LOC100996750A0A140TA64 210 aa6.21□□□□□ -1.41
COL20A1-205ENST00000471582 KRTAP9-7A8MTY7 169 aa6.21□□□□□ -1.41
COL20A1-205ENST00000471582 MT1GP13640 62 aa6.21□□□□□ -1.41
COL20A1-205ENST00000471582 KRTAP4-6Q9BYQ5 205 aa6.21□□□□□ -1.41
COL20A1-205ENST00000471582 MDN1Q9NU22 5596 aa6.21□□□□□ -1.42
COL20A1-205ENST00000471582 KRTAP2-3P0C7H8 128 aa6.18□□□□□ -1.42
COL20A1-205ENST00000471582 KRTAP2-4Q9BYR9 128 aa6.18□□□□□ -1.42
COL20A1-205ENST00000471582 KRTAP2-1Q9BYU5 128 aa6.18□□□□□ -1.42
COL20A1-205ENST00000471582 MT1MQ8N339 61 aa6.17□□□□□ -1.42
COL20A1-205ENST00000471582 LCE5AQ5TCM9 118 aa6.09□□□□□ -1.43
COL20A1-205ENST00000471582 KRTAP4-3Q9BYR4 195 aa6.08□□□□□ -1.44
COL20A1-205ENST00000471582 LCE1AQ5T7P2 110 aa6.05□□□□□ -1.44
COL20A1-205ENST00000471582 SPRR2EP22531 72 aa6.01□□□□□ -1.45
COL20A1-205ENST00000471582 SPRR2BP35325 72 aa6.01□□□□□ -1.45
COL20A1-205ENST00000471582 SPRR2AP35326 72 aa6.01□□□□□ -1.45
COL20A1-205ENST00000471582 NEBP20929 6669 aa5.88□□□□□ -1.47
COL20A1-205ENST00000471582 DSTQ03001 7570 aaKnown RBP5.79□□□□□ -1.48
COL20A1-205ENST00000471582 SPRR2DP22532 72 aa5.79□□□□□ -1.48
COL20A1-205ENST00000471582 LCE3BQ5TA77 95 aa5.58□□□□□ -1.52
COL20A1-205ENST00000471582 MT1AP04731 61 aa5.54□□□□□ -1.52
COL20A1-205ENST00000471582 KRTAP5-5Q701N2 237 aaPredicted RBP5.52□□□□□ -1.53
COL20A1-205ENST00000471582 KRTAP6-1Q3LI64 71 aa5.5□□□□□ -1.53
COL20A1-205ENST00000471582 KRTAP20-1Q3LI63 56 aa5.47□□□□□ -1.53
COL20A1-205ENST00000471582 KRTAP2-2Q9BYT5 123 aa5.38□□□□□ -1.55
COL20A1-205ENST00000471582 KRTAP12-4P60329 112 aa5.33□□□□□ -1.56
COL20A1-205ENST00000471582 KRTAP4-9Q9BYQ8 210 aa5.25□□□□□ -1.57
COL20A1-205ENST00000471582 KRTAP5-4Q6L8H1 288 aa5.23□□□□□ -1.57
COL20A1-205ENST00000471582 SYNE1Q8NF91 8797 aaKnown RBP5.21□□□□□ -1.57
COL20A1-205ENST00000471582 KRTAP9-4Q9BYQ2 154 aa5.21□□□□□ -1.57
COL20A1-205ENST00000471582 LCE3DQ9BYE3 92 aa5.15□□□□□ -1.58
COL20A1-205ENST00000471582 LCE4AQ5TA78 99 aa5.13□□□□□ -1.59
COL20A1-205ENST00000471582 KRTAP9-9Q9BYP9 154 aa5.11□□□□□ -1.59
COL20A1-205ENST00000471582 LCE3EQ5T5B0 92 aa5.07□□□□□ -1.6
COL20A1-205ENST00000471582 MT4P47944 62 aa5.05□□□□□ -1.6
COL20A1-205ENST00000471582 KRTAP4-12Q9BQ66 201 aa5.04□□□□□ -1.6
COL20A1-205ENST00000471582 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
COL20A1-205ENST00000471582 HMCN1Q96RW7 5635 aa5□□□□□ -1.61
COL20A1-205ENST00000471582 MT3P25713 68 aa4.99□□□□□ -1.61
COL20A1-205ENST00000471582 KRTAP6-2Q3LI66 62 aa4.98□□□□□ -1.61
COL20A1-205ENST00000471582 KRTAP20-2Q3LI61 65 aa4.88□□□□□ -1.63
COL20A1-205ENST00000471582 KRTAP4-2Q9BYR5 136 aa4.8□□□□□ -1.64
COL20A1-205ENST00000471582 KRTAP5-2Q701N4 177 aa4.74□□□□□ -1.65
COL20A1-205ENST00000471582 KRTAP5-3Q6L8H2 238 aa4.71□□□□□ -1.66
COL20A1-205ENST00000471582 PRM1P04553 51 aa4.66□□□□□ -1.66
COL20A1-205ENST00000471582 OBSCNQ5VST9 7968 aa4.55□□□□□ -1.68
COL20A1-205ENST00000471582 KRTAP4-11Q9BYQ6 195 aa4.53□□□□□ -1.68
COL20A1-205ENST00000471582 AHNAK2Q8IVF2 5795 aa4.48□□□□□ -1.69
COL20A1-205ENST00000471582 KRTAP5-10Q6L8G5 202 aa4.29□□□□□ -1.72
COL20A1-205ENST00000471582 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
COL20A1-205ENST00000471582 GPR98Q8WXG9 6306 aa4.18□□□□□ -1.74
COL20A1-205ENST00000471582 KRTAP5-8O75690 187 aa4.13□□□□□ -1.75
COL20A1-205ENST00000471582 MUC5ACP98088 5654 aa4.11□□□□□ -1.75
COL20A1-205ENST00000471582 KRTAP5-1Q6L8H4 278 aa4.09□□□□□ -1.75
COL20A1-205ENST00000471582 LCE1BQ5T7P3 118 aa4.01□□□□□ -1.77
COL20A1-205ENST00000471582 KRTAP5-7Q6L8G8 165 aa3.98□□□□□ -1.77
COL20A1-205ENST00000471582 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
COL20A1-205ENST00000471582 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.74□□□□□ -1.81
COL20A1-205ENST00000471582 MUC5BQ9HC84 5762 aaPredicted RBP3.65□□□□□ -1.82
COL20A1-205ENST00000471582 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
COL20A1-205ENST00000471582 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
COL20A1-205ENST00000471582 AHNAKQ09666 5890 aaKnown RBP3.41□□□□□ -1.86
COL20A1-205ENST00000471582 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
COL20A1-205ENST00000471582 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
COL20A1-205ENST00000471582 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
COL20A1-205ENST00000471582 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
COL20A1-205ENST00000471582 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
COL20A1-205ENST00000471582 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 40.8 ms