RNA–Protein interactions for RNA: ENST00000471417.5

LINC01140-204, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 3

Gene LINC01140, Length 751 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-204ENST00000471417 AHNAK2Q8IVF2 5795 aa3.34□□□□□ -1.87
LINC01140-204ENST00000471417 KRTAP12-1P59990 96 aa3.34□□□□□ -1.87
LINC01140-204ENST00000471417 COA5Q86WW8 74 aa3.33□□□□□ -1.88
LINC01140-204ENST00000471417 KRTAP5-4Q6L8H1 288 aa3.32□□□□□ -1.88
LINC01140-204ENST00000471417 CCDC179H3BU77 68 aa3.31□□□□□ -1.88
LINC01140-204ENST00000471417 KRTAP5-10Q6L8G5 202 aa3.31□□□□□ -1.88
LINC01140-204ENST00000471417 SERP1Q9Y6X1 66 aa3.31□□□□□ -1.88
LINC01140-204ENST00000471417 TMEM258P61165 79 aa3.3□□□□□ -1.88
LINC01140-204ENST00000471417 A0A1B0GU33 70 aa3.29□□□□□ -1.88
LINC01140-204ENST00000471417 ATP5EP56381 51 aaPredicted RBP3.29□□□□□ -1.88
LINC01140-204ENST00000471417 SEC61GP60059 68 aa3.29□□□□□ -1.88
LINC01140-204ENST00000471417 LCE3AQ5TA76 89 aa3.28□□□□□ -1.88
LINC01140-204ENST00000471417 C10orf95Q9H7T3 257 aa3.28□□□□□ -1.88
LINC01140-204ENST00000471417 A8MU10 97 aa3.22□□□□□ -1.89
LINC01140-204ENST00000471417 H7BZZ5 65 aa3.22□□□□□ -1.89
LINC01140-204ENST00000471417 RPS28P62857 69 aaKnown RBP3.22□□□□□ -1.89
LINC01140-204ENST00000471417 TNP1P09430 55 aa3.19□□□□□ -1.9
LINC01140-204ENST00000471417 KRTAP5-7Q6L8G8 165 aa3.19□□□□□ -1.9
LINC01140-204ENST00000471417 SMIM26A0A096LP01 95 aa3.18□□□□□ -1.9
LINC01140-204ENST00000471417 KRTAP20-2Q3LI61 65 aa3.15□□□□□ -1.91
LINC01140-204ENST00000471417 A0A1B0GU69 56 aa3.14□□□□□ -1.91
LINC01140-204ENST00000471417 KRTAP12-3P60328 96 aa3.13□□□□□ -1.91
LINC01140-204ENST00000471417 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
LINC01140-204ENST00000471417 V9GYY9 64 aa3.13□□□□□ -1.91
LINC01140-204ENST00000471417 SPRR5A0A1B0GTR4 108 aa3.09□□□□□ -1.91
LINC01140-204ENST00000471417 SYNE1Q8NF91 8797 aaKnown RBP3.07□□□□□ -1.92
LINC01140-204ENST00000471417 KRTAP12-4P60329 112 aa3.05□□□□□ -1.92
LINC01140-204ENST00000471417 PRR15LQ9BU68 103 aa3.05□□□□□ -1.92
LINC01140-204ENST00000471417 Q1T7F1 81 aa3.03□□□□□ -1.92
LINC01140-204ENST00000471417 LINC01558Q9Y6Z2 57 aa2.98□□□□□ -1.93
LINC01140-204ENST00000471417 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
LINC01140-204ENST00000471417 PSPHP1O15172 72 aa2.94□□□□□ -1.94
LINC01140-204ENST00000471417 A6NED7 52 aa2.92□□□□□ -1.94
LINC01140-204ENST00000471417 H3BS24 57 aa2.92□□□□□ -1.94
LINC01140-204ENST00000471417 KRTAP25-1Q3LHN0 102 aa2.91□□□□□ -1.94
LINC01140-204ENST00000471417 UQCR11O14957 56 aa2.9□□□□□ -1.95
LINC01140-204ENST00000471417 BRK1Q8WUW1 75 aa2.9□□□□□ -1.95
LINC01140-204ENST00000471417 KRTAP5-2Q701N4 177 aa2.88□□□□□ -1.95
LINC01140-204ENST00000471417 PRO0628Q9UI54 55 aa2.88□□□□□ -1.95
LINC01140-204ENST00000471417 KRTAP6-1Q3LI64 71 aa2.87□□□□□ -1.95
LINC01140-204ENST00000471417 KRTAP15-1Q3LI76 137 aa2.86□□□□□ -1.95
LINC01140-204ENST00000471417 LCE3CQ5T5A8 94 aa2.86□□□□□ -1.95
LINC01140-204ENST00000471417 MT1AP04731 61 aa2.85□□□□□ -1.95
LINC01140-204ENST00000471417 CDC42SE1Q9NRR8 79 aa2.85□□□□□ -1.95
LINC01140-204ENST00000471417 K7ERS5 55 aa2.84□□□□□ -1.95
LINC01140-204ENST00000471417 MIR22HGQ0VDD5 57 aa2.84□□□□□ -1.95
LINC01140-204ENST00000471417 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
LINC01140-204ENST00000471417 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
LINC01140-204ENST00000471417 OBSCNQ5VST9 7968 aa2.77□□□□□ -1.97
LINC01140-204ENST00000471417 KRTAP23-1A1A580 65 aa2.77□□□□□ -1.97
LINC01140-204ENST00000471417 PMAIP1Q13794 54 aa2.77□□□□□ -1.97
LINC01140-204ENST00000471417 KRTAP9-6A8MVA2 160 aa2.76□□□□□ -1.97
LINC01140-204ENST00000471417 KRTAP6-2Q3LI66 62 aa2.76□□□□□ -1.97
LINC01140-204ENST00000471417 MUC5ACP98088 5654 aa2.75□□□□□ -1.97
LINC01140-204ENST00000471417 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
LINC01140-204ENST00000471417 MUC5BQ9HC84 5762 aaPredicted RBP2.73□□□□□ -1.97
LINC01140-204ENST00000471417 KTN1-AS1Q86SY8 53 aa2.65□□□□□ -1.99
LINC01140-204ENST00000471417 A0A0A0MQY5 61 aa2.64□□□□□ -1.99
LINC01140-204ENST00000471417 KRTAP5-1Q6L8H4 278 aa2.63□□□□□ -1.99
LINC01140-204ENST00000471417 ROMO1P60602 79 aa2.61□□□□□ -1.99
LINC01140-204ENST00000471417 MT3P25713 68 aa2.6□□□□□ -1.99
LINC01140-204ENST00000471417 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
LINC01140-204ENST00000471417 PRAC1Q96KF2 57 aa2.47□□□□□ -2.01
LINC01140-204ENST00000471417 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
LINC01140-204ENST00000471417 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
LINC01140-204ENST00000471417 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
LINC01140-204ENST00000471417 LUZP6Q538Z0 58 aa2.22□□□□□ -2.05
LINC01140-204ENST00000471417 NDUFAF8A1L188 74 aa2.05□□□□□ -2.08
LINC01140-204ENST00000471417 LCE1FQ5T754 118 aa2.02□□□□□ -2.09
LINC01140-204ENST00000471417 LCE3DQ9BYE3 92 aa2.02□□□□□ -2.09
LINC01140-204ENST00000471417 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
LINC01140-204ENST00000471417 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
LINC01140-204ENST00000471417 LCE3EQ5T5B0 92 aa1.87□□□□□ -2.11
LINC01140-204ENST00000471417 INE1O15225 51 aa1.85□□□□□ -2.11
LINC01140-204ENST00000471417 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
LINC01140-204ENST00000471417 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
LINC01140-204ENST00000471417 PRM1P04553 51 aa1.32□□□□□ -2.2
LINC01140-204ENST00000471417 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 83.7 ms