RNA–Protein interactions for RNA: ENST00000471126.1

CNOT3-206, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-206ENST00000471126 LCE4AQ5TA78 99 aa5.73□□□□□ -1.49
CNOT3-206ENST00000471126 PCP4P48539 62 aa5.71□□□□□ -1.5
CNOT3-206ENST00000471126 MIR22HGQ0VDD5 57 aa5.69□□□□□ -1.5
CNOT3-206ENST00000471126 MT1EP04732 61 aa5.68□□□□□ -1.5
CNOT3-206ENST00000471126 RPS28P62857 69 aaKnown RBP5.68□□□□□ -1.5
CNOT3-206ENST00000471126 LCE5AQ5TCM9 118 aa5.68□□□□□ -1.5
CNOT3-206ENST00000471126 PSPHP1O15172 72 aa5.67□□□□□ -1.5
CNOT3-206ENST00000471126 KRTAP5-3Q6L8H2 238 aa5.67□□□□□ -1.5
CNOT3-206ENST00000471126 TNP1P09430 55 aa5.64□□□□□ -1.51
CNOT3-206ENST00000471126 KRTAP19-5Q3LI72 72 aa5.6□□□□□ -1.51
CNOT3-206ENST00000471126 KRTAP4-6Q9BYQ5 205 aa5.59□□□□□ -1.51
CNOT3-206ENST00000471126 KRTAP19-3Q7Z4W3 81 aa5.58□□□□□ -1.52
CNOT3-206ENST00000471126 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
CNOT3-206ENST00000471126 K7ERS5 55 aa5.5□□□□□ -1.53
CNOT3-206ENST00000471126 A6NED7 52 aa5.48□□□□□ -1.53
CNOT3-206ENST00000471126 MT1GP13640 62 aa5.47□□□□□ -1.53
CNOT3-206ENST00000471126 KRTAP5-4Q6L8H1 288 aa5.47□□□□□ -1.53
CNOT3-206ENST00000471126 KRTAP25-1Q3LHN0 102 aa5.46□□□□□ -1.54
CNOT3-206ENST00000471126 MT1LQ93083 61 aa5.45□□□□□ -1.54
CNOT3-206ENST00000471126 PP632Q6XCG6 107 aa5.38□□□□□ -1.55
CNOT3-206ENST00000471126 MT1MQ8N339 61 aa5.38□□□□□ -1.55
CNOT3-206ENST00000471126 KRTAP12-3P60328 96 aa5.37□□□□□ -1.55
CNOT3-206ENST00000471126 KRTAP23-1A1A580 65 aa5.34□□□□□ -1.55
CNOT3-206ENST00000471126 CDC42SE1Q9NRR8 79 aa5.33□□□□□ -1.56
CNOT3-206ENST00000471126 AHNAKQ09666 5890 aaKnown RBP5.27□□□□□ -1.57
CNOT3-206ENST00000471126 KRTAP20-2Q3LI61 65 aa5.24□□□□□ -1.57
CNOT3-206ENST00000471126 ROMO1P60602 79 aa5.22□□□□□ -1.57
CNOT3-206ENST00000471126 KRTAP4-3Q9BYR4 195 aa5.2□□□□□ -1.58
CNOT3-206ENST00000471126 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
CNOT3-206ENST00000471126 KRTAP4-7Q9BYR0 210 aa5.16□□□□□ -1.58
CNOT3-206ENST00000471126 MUC5ACP98088 5654 aa5.15□□□□□ -1.58
CNOT3-206ENST00000471126 MUC5BQ9HC84 5762 aaPredicted RBP5.09□□□□□ -1.59
CNOT3-206ENST00000471126 KRTAP15-1Q3LI76 137 aa5.08□□□□□ -1.6
CNOT3-206ENST00000471126 KRTAP4-11Q9BYQ6 195 aa5□□□□□ -1.61
CNOT3-206ENST00000471126 KRTAP5-5Q701N2 237 aaPredicted RBP4.99□□□□□ -1.61
CNOT3-206ENST00000471126 LCE3CQ5T5A8 94 aa4.97□□□□□ -1.61
CNOT3-206ENST00000471126 KRTAP12-4P60329 112 aa4.95□□□□□ -1.62
CNOT3-206ENST00000471126 KRTAP5-8O75690 187 aa4.92□□□□□ -1.62
CNOT3-206ENST00000471126 BRK1Q8WUW1 75 aa4.9□□□□□ -1.63
CNOT3-206ENST00000471126 LOC100996750A0A140TA64 210 aa4.87□□□□□ -1.63
CNOT3-206ENST00000471126 SYNE1Q8NF91 8797 aaKnown RBP4.87□□□□□ -1.63
CNOT3-206ENST00000471126 KRTAP9-9Q9BYP9 154 aa4.75□□□□□ -1.65
CNOT3-206ENST00000471126 KRTAP9-6A8MVA2 160 aa4.73□□□□□ -1.65
CNOT3-206ENST00000471126 MT1AP04731 61 aa4.65□□□□□ -1.67
CNOT3-206ENST00000471126 KRTAP5-2Q701N4 177 aa4.63□□□□□ -1.67
CNOT3-206ENST00000471126 OBSCNQ5VST9 7968 aa4.62□□□□□ -1.67
CNOT3-206ENST00000471126 PMAIP1Q13794 54 aa4.62□□□□□ -1.67
CNOT3-206ENST00000471126 KRTAP6-1Q3LI64 71 aa4.59□□□□□ -1.67
CNOT3-206ENST00000471126 SVIPQ8NHG7 77 aa4.51□□□□□ -1.69
CNOT3-206ENST00000471126 PRO0628Q9UI54 55 aa4.48□□□□□ -1.69
CNOT3-206ENST00000471126 KRTAP9-4Q9BYQ2 154 aa4.47□□□□□ -1.69
CNOT3-206ENST00000471126 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
CNOT3-206ENST00000471126 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
CNOT3-206ENST00000471126 KRTAP5-1Q6L8H4 278 aa4.33□□□□□ -1.72
CNOT3-206ENST00000471126 KTN1-AS1Q86SY8 53 aa4.25□□□□□ -1.73
CNOT3-206ENST00000471126 MT3P25713 68 aa4.22□□□□□ -1.73
CNOT3-206ENST00000471126 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
CNOT3-206ENST00000471126 LCE1BQ5T7P3 118 aa3.72□□□□□ -1.81
CNOT3-206ENST00000471126 KRTAP4-12Q9BQ66 201 aa3.72□□□□□ -1.81
CNOT3-206ENST00000471126 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
CNOT3-206ENST00000471126 LUZP6Q538Z0 58 aa3.66□□□□□ -1.82
CNOT3-206ENST00000471126 H3BS24 57 aa3.63□□□□□ -1.83
CNOT3-206ENST00000471126 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
CNOT3-206ENST00000471126 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
CNOT3-206ENST00000471126 PHGR1C9JFL3 82 aa3.55□□□□□ -1.84
CNOT3-206ENST00000471126 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
CNOT3-206ENST00000471126 A0A0A0MQY5 61 aa3.45□□□□□ -1.86
CNOT3-206ENST00000471126 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
CNOT3-206ENST00000471126 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
CNOT3-206ENST00000471126 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
CNOT3-206ENST00000471126 NDUFAF8A1L188 74 aa3.11□□□□□ -1.91
CNOT3-206ENST00000471126 KRTAP21-2Q3LI59 83 aa3.06□□□□□ -1.92
CNOT3-206ENST00000471126 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
CNOT3-206ENST00000471126 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
CNOT3-206ENST00000471126 KRTAP21-1Q3LI58 79 aa2.69□□□□□ -1.98
CNOT3-206ENST00000471126 PRM1P04553 51 aa2.67□□□□□ -1.98
CNOT3-206ENST00000471126 INE1O15225 51 aa2.57□□□□□ -2
CNOT3-206ENST00000471126 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 119 ms