RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 KRTAP9-4Q9BYQ2 154 aa3.67□□□□□ -1.82
LMCD1-207ENST00000470776 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
LMCD1-207ENST00000470776 PRO2289Q9P1D8 64 aa3.65□□□□□ -1.83
LMCD1-207ENST00000470776 LUZP6Q538Z0 58 aa3.64□□□□□ -1.83
LMCD1-207ENST00000470776 KRTAP20-1Q3LI63 56 aa3.61□□□□□ -1.83
LMCD1-207ENST00000470776 LCE1DQ5T752 114 aa3.56□□□□□ -1.84
LMCD1-207ENST00000470776 LCE5AQ5TCM9 118 aa3.55□□□□□ -1.84
LMCD1-207ENST00000470776 KRTAP4-8A0A0G2JLE6 195 aa3.53□□□□□ -1.84
LMCD1-207ENST00000470776 KRTAP10-7P60409 375 aaPredicted RBP3.53□□□□□ -1.84
LMCD1-207ENST00000470776 KRTAP10-12P60413 245 aa3.53□□□□□ -1.84
LMCD1-207ENST00000470776 SPRR5A0A1B0GTR4 108 aa3.49□□□□□ -1.85
LMCD1-207ENST00000470776 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
LMCD1-207ENST00000470776 KRTAP8-1Q8IUC2 63 aa3.42□□□□□ -1.86
LMCD1-207ENST00000470776 KRTAP2-3P0C7H8 128 aa3.4□□□□□ -1.87
LMCD1-207ENST00000470776 KRTAP2-4Q9BYR9 128 aa3.4□□□□□ -1.87
LMCD1-207ENST00000470776 KRTAP4-9Q9BYQ8 210 aa3.39□□□□□ -1.87
LMCD1-207ENST00000470776 KRTAP4-7Q9BYR0 210 aa3.39□□□□□ -1.87
LMCD1-207ENST00000470776 KRTAP5-9P26371 169 aa3.33□□□□□ -1.88
LMCD1-207ENST00000470776 KRTAP4-11Q9BYQ6 195 aa3.33□□□□□ -1.88
LMCD1-207ENST00000470776 KRTAP19-7Q3SYF9 63 aa3.32□□□□□ -1.88
LMCD1-207ENST00000470776 KRTAP19-5Q3LI72 72 aa3.31□□□□□ -1.88
LMCD1-207ENST00000470776 KRTAP12-3P60328 96 aa3.3□□□□□ -1.88
LMCD1-207ENST00000470776 MT1EP04732 61 aa3.26□□□□□ -1.89
LMCD1-207ENST00000470776 KRTAP2-2Q9BYT5 123 aa3.26□□□□□ -1.89
LMCD1-207ENST00000470776 KRTAP2-1Q9BYU5 128 aa3.26□□□□□ -1.89
LMCD1-207ENST00000470776 SPRR2FQ96RM1 72 aa3.23□□□□□ -1.89
LMCD1-207ENST00000470776 KRTAP4-2Q9BYR5 136 aa3.23□□□□□ -1.89
LMCD1-207ENST00000470776 MT1LQ93083 61 aa3.18□□□□□ -1.9
LMCD1-207ENST00000470776 INE1O15225 51 aa3.17□□□□□ -1.9
LMCD1-207ENST00000470776 SPRR2EP22531 72 aa3.17□□□□□ -1.9
LMCD1-207ENST00000470776 SPRR2BP35325 72 aa3.17□□□□□ -1.9
LMCD1-207ENST00000470776 SPRR2AP35326 72 aa3.17□□□□□ -1.9
LMCD1-207ENST00000470776 DSTQ03001 7570 aaKnown RBP3.17□□□□□ -1.9
LMCD1-207ENST00000470776 AHNAK2Q8IVF2 5795 aa3.16□□□□□ -1.9
LMCD1-207ENST00000470776 HMCN1Q96RW7 5635 aa3.16□□□□□ -1.9
LMCD1-207ENST00000470776 LCE1AQ5T7P2 110 aa3.15□□□□□ -1.91
LMCD1-207ENST00000470776 KRTAP19-3Q7Z4W3 81 aa3.14□□□□□ -1.91
LMCD1-207ENST00000470776 MT1GP13640 62 aa3.13□□□□□ -1.91
LMCD1-207ENST00000470776 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
LMCD1-207ENST00000470776 MT1MQ8N339 61 aa3.07□□□□□ -1.92
LMCD1-207ENST00000470776 SPRR2DP22532 72 aa3.05□□□□□ -1.92
LMCD1-207ENST00000470776 KRTAP4-3Q9BYR4 195 aa2.96□□□□□ -1.94
LMCD1-207ENST00000470776 MT3P25713 68 aa2.94□□□□□ -1.94
LMCD1-207ENST00000470776 KRTAP9-6A8MVA2 160 aa2.92□□□□□ -1.94
LMCD1-207ENST00000470776 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
LMCD1-207ENST00000470776 KRTAP5-7Q6L8G8 165 aa2.88□□□□□ -1.95
LMCD1-207ENST00000470776 AHNAKQ09666 5890 aaKnown RBP2.86□□□□□ -1.95
LMCD1-207ENST00000470776 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
LMCD1-207ENST00000470776 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
LMCD1-207ENST00000470776 KRTAP5-3Q6L8H2 238 aa2.73□□□□□ -1.97
LMCD1-207ENST00000470776 MT1AP04731 61 aa2.72□□□□□ -1.97
LMCD1-207ENST00000470776 KRTAP5-4Q6L8H1 288 aa2.72□□□□□ -1.97
LMCD1-207ENST00000470776 MUC5ACP98088 5654 aa2.7□□□□□ -1.98
LMCD1-207ENST00000470776 MT4P47944 62 aa2.69□□□□□ -1.98
LMCD1-207ENST00000470776 KRTAP6-1Q3LI64 71 aa2.67□□□□□ -1.98
LMCD1-207ENST00000470776 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
LMCD1-207ENST00000470776 SYNE1Q8NF91 8797 aaKnown RBP2.65□□□□□ -1.99
LMCD1-207ENST00000470776 KRTAP12-4P60329 112 aa2.59□□□□□ -1.99
LMCD1-207ENST00000470776 KRTAP20-2Q3LI61 65 aa2.52□□□□□ -2.01
LMCD1-207ENST00000470776 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.02
LMCD1-207ENST00000470776 KRTAP6-2Q3LI66 62 aa2.45□□□□□ -2.02
LMCD1-207ENST00000470776 LCE1EQ5T753 118 aa2.4□□□□□ -2.03
LMCD1-207ENST00000470776 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
LMCD1-207ENST00000470776 LCE3EQ5T5B0 92 aa2.39□□□□□ -2.03
LMCD1-207ENST00000470776 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
LMCD1-207ENST00000470776 OBSCNQ5VST9 7968 aa2.26□□□□□ -2.05
LMCD1-207ENST00000470776 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
LMCD1-207ENST00000470776 PRM1P04553 51 aa2.18□□□□□ -2.06
LMCD1-207ENST00000470776 KRTAP5-1Q6L8H4 278 aa2.12□□□□□ -2.07
LMCD1-207ENST00000470776 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.04□□□□□ -2.08
LMCD1-207ENST00000470776 LCE1CQ5T751 118 aa2.02□□□□□ -2.09
LMCD1-207ENST00000470776 LCE1BQ5T7P3 118 aa2.02□□□□□ -2.09
LMCD1-207ENST00000470776 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
LMCD1-207ENST00000470776 KRTAP4-4Q9BYR3 166 aa1.69□□□□□ -2.14
LMCD1-207ENST00000470776 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
LMCD1-207ENST00000470776 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
LMCD1-207ENST00000470776 MUC19Q7Z5P9 8384 aa1.41□□□□□ -2.18
LMCD1-207ENST00000470776 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 75.7 ms