RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 KRTAP4-8A0A0G2JLE6 195 aa4.87□□□□□ -1.63
NPHP4-207ENST00000470763 KRTAP4-8Q9BYQ9 185 aa4.87□□□□□ -1.63
NPHP4-207ENST00000470763 KRTAP4-7Q9BYR0 210 aa4.86□□□□□ -1.63
NPHP4-207ENST00000470763 KRTAP2-3P0C7H8 128 aa4.85□□□□□ -1.63
NPHP4-207ENST00000470763 KRTAP2-4Q9BYR9 128 aa4.85□□□□□ -1.63
NPHP4-207ENST00000470763 KRTAP2-1Q9BYU5 128 aa4.85□□□□□ -1.63
NPHP4-207ENST00000470763 KRTAP6-3Q3LI67 103 aa4.83□□□□□ -1.64
NPHP4-207ENST00000470763 MUC12Q9UKN1 5478 aa4.8□□□□□ -1.64
NPHP4-207ENST00000470763 NEBP20929 6669 aa4.72□□□□□ -1.65
NPHP4-207ENST00000470763 KRTAP19-7Q3SYF9 63 aa4.7□□□□□ -1.66
NPHP4-207ENST00000470763 MDN1Q9NU22 5596 aa4.69□□□□□ -1.66
NPHP4-207ENST00000470763 KRTAP5-9P26371 169 aa4.64□□□□□ -1.67
NPHP4-207ENST00000470763 MT1LQ93083 61 aa4.59□□□□□ -1.68
NPHP4-207ENST00000470763 MT1EP04732 61 aa4.52□□□□□ -1.69
NPHP4-207ENST00000470763 LOC100996750A0A140TA64 210 aa4.51□□□□□ -1.69
NPHP4-207ENST00000470763 SPRR2FQ96RM1 72 aa4.48□□□□□ -1.69
NPHP4-207ENST00000470763 KRTAP20-1Q3LI63 56 aa4.47□□□□□ -1.69
NPHP4-207ENST00000470763 KRTAP12-4P60329 112 aa4.46□□□□□ -1.7
NPHP4-207ENST00000470763 KRTAP4-3Q9BYR4 195 aa4.45□□□□□ -1.7
NPHP4-207ENST00000470763 KRTAP19-4Q3LI73 84 aa4.41□□□□□ -1.7
NPHP4-207ENST00000470763 MT1GP13640 62 aa4.41□□□□□ -1.7
NPHP4-207ENST00000470763 SPRR2EP22531 72 aa4.4□□□□□ -1.7
NPHP4-207ENST00000470763 SPRR2BP35325 72 aa4.4□□□□□ -1.7
NPHP4-207ENST00000470763 SPRR2AP35326 72 aa4.4□□□□□ -1.7
NPHP4-207ENST00000470763 LCE1AQ5T7P2 110 aa4.38□□□□□ -1.71
NPHP4-207ENST00000470763 DSTQ03001 7570 aaKnown RBP4.3□□□□□ -1.72
NPHP4-207ENST00000470763 SPRR2DP22532 72 aa4.25□□□□□ -1.73
NPHP4-207ENST00000470763 KRTAP4-9Q9BYQ8 210 aa4.22□□□□□ -1.73
NPHP4-207ENST00000470763 KRTAP2-2Q9BYT5 123 aa4.22□□□□□ -1.73
NPHP4-207ENST00000470763 MT1MQ8N339 61 aa4.2□□□□□ -1.74
NPHP4-207ENST00000470763 LCE3BQ5TA77 95 aa4.2□□□□□ -1.74
NPHP4-207ENST00000470763 SYNE1Q8NF91 8797 aaKnown RBP4.18□□□□□ -1.74
NPHP4-207ENST00000470763 KRTAP19-3Q7Z4W3 81 aa4.14□□□□□ -1.75
NPHP4-207ENST00000470763 LCE5AQ5TCM9 118 aa4.08□□□□□ -1.76
NPHP4-207ENST00000470763 PRM1P04553 51 aa4.01□□□□□ -1.77
NPHP4-207ENST00000470763 LCE3DQ9BYE3 92 aa3.98□□□□□ -1.77
NPHP4-207ENST00000470763 OBSCNQ5VST9 7968 aa3.97□□□□□ -1.77
NPHP4-207ENST00000470763 KRTAP5-5Q701N2 237 aaPredicted RBP3.96□□□□□ -1.78
NPHP4-207ENST00000470763 MT1AP04731 61 aa3.96□□□□□ -1.78
NPHP4-207ENST00000470763 KRTAP6-1Q3LI64 71 aa3.95□□□□□ -1.78
NPHP4-207ENST00000470763 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
NPHP4-207ENST00000470763 HMCN1Q96RW7 5635 aa3.82□□□□□ -1.8
NPHP4-207ENST00000470763 GPR98Q8WXG9 6306 aa3.81□□□□□ -1.8
NPHP4-207ENST00000470763 LCE1DQ5T752 114 aa3.79□□□□□ -1.8
NPHP4-207ENST00000470763 KRTAP6-2Q3LI66 62 aa3.76□□□□□ -1.81
NPHP4-207ENST00000470763 MT4P47944 62 aa3.74□□□□□ -1.81
NPHP4-207ENST00000470763 LCE4AQ5TA78 99 aa3.74□□□□□ -1.81
NPHP4-207ENST00000470763 KRTAP5-4Q6L8H1 288 aa3.73□□□□□ -1.81
NPHP4-207ENST00000470763 KRTAP4-6Q9BYQ5 205 aa3.67□□□□□ -1.82
NPHP4-207ENST00000470763 AHNAK2Q8IVF2 5795 aa3.63□□□□□ -1.83
NPHP4-207ENST00000470763 KRTAP9-4Q9BYQ2 154 aa3.54□□□□□ -1.84
NPHP4-207ENST00000470763 KRTAP5-10Q6L8G5 202 aa3.53□□□□□ -1.84
NPHP4-207ENST00000470763 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
NPHP4-207ENST00000470763 KRTAP5-3Q6L8H2 238 aa3.44□□□□□ -1.86
NPHP4-207ENST00000470763 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
NPHP4-207ENST00000470763 MT3P25713 68 aa3.39□□□□□ -1.87
NPHP4-207ENST00000470763 KRTAP5-7Q6L8G8 165 aa3.38□□□□□ -1.87
NPHP4-207ENST00000470763 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
NPHP4-207ENST00000470763 KRTAP4-11Q9BYQ6 195 aa3.2□□□□□ -1.9
NPHP4-207ENST00000470763 KRTAP5-8O75690 187 aa3.11□□□□□ -1.91
NPHP4-207ENST00000470763 MUC5ACP98088 5654 aa3.04□□□□□ -1.92
NPHP4-207ENST00000470763 MUC5BQ9HC84 5762 aaPredicted RBP3.03□□□□□ -1.92
NPHP4-207ENST00000470763 AHNAKQ09666 5890 aaKnown RBP2.96□□□□□ -1.94
NPHP4-207ENST00000470763 KRTAP5-1Q6L8H4 278 aa2.94□□□□□ -1.94
NPHP4-207ENST00000470763 KRTAP9-9Q9BYP9 154 aa2.9□□□□□ -1.95
NPHP4-207ENST00000470763 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
NPHP4-207ENST00000470763 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
NPHP4-207ENST00000470763 KRTAP4-2Q9BYR5 136 aa2.66□□□□□ -1.98
NPHP4-207ENST00000470763 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
NPHP4-207ENST00000470763 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
NPHP4-207ENST00000470763 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
NPHP4-207ENST00000470763 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
NPHP4-207ENST00000470763 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
NPHP4-207ENST00000470763 KRTAP4-12Q9BQ66 201 aa2.41□□□□□ -2.02
NPHP4-207ENST00000470763 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.36□□□□□ -2.03
NPHP4-207ENST00000470763 KRTAP5-11Q6L8G4 156 aa2.34□□□□□ -2.03
NPHP4-207ENST00000470763 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
NPHP4-207ENST00000470763 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 118.2 ms