RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 SSPOA2VEC9 5147 aa1.03□□□□□ -2.24
UBXN4-206ENST00000470687 MACF1Q9UPN3 7388 aaKnown RBP1.02□□□□□ -2.25
UBXN4-206ENST00000470687 MT1BP07438 61 aa1.02□□□□□ -2.25
UBXN4-206ENST00000470687 COX7CP15954 63 aa1.02□□□□□ -2.25
UBXN4-206ENST00000470687 RPS28P62857 69 aaKnown RBP1.02□□□□□ -2.25
UBXN4-206ENST00000470687 COL5A1-AS1Q5SY13 56 aa1.02□□□□□ -2.25
UBXN4-206ENST00000470687 CDC42SE1Q9NRR8 79 aa1.02□□□□□ -2.25
UBXN4-206ENST00000470687 SPCS1Q9Y6A9 102 aa1.02□□□□□ -2.25
UBXN4-206ENST00000470687 SYNE2Q8WXH0 6885 aaKnown RBP1.02□□□□□ -2.25
UBXN4-206ENST00000470687 FLGP20930 4061 aaPredicted RBP1.01□□□□□ -2.25
UBXN4-206ENST00000470687 INE1O15225 51 aa1□□□□□ -2.25
UBXN4-206ENST00000470687 SPTSSBQ8NFR3 76 aa1□□□□□ -2.25
UBXN4-206ENST00000470687 KRTAP2-1Q9BYU5 128 aa1□□□□□ -2.25
UBXN4-206ENST00000470687 K7EP34 96 aa0.99□□□□□ -2.25
UBXN4-206ENST00000470687 BRK1Q8WUW1 75 aa0.99□□□□□ -2.25
UBXN4-206ENST00000470687 M0QZ58 72 aa0.98□□□□□ -2.25
UBXN4-206ENST00000470687 ETDBQ3ZM63 59 aa0.98□□□□□ -2.25
UBXN4-206ENST00000470687 LINC00643Q86TS7 51 aa0.98□□□□□ -2.25
UBXN4-206ENST00000470687 KRTAP8-1Q8IUC2 63 aa0.98□□□□□ -2.25
UBXN4-206ENST00000470687 SPRR2FQ96RM1 72 aa0.98□□□□□ -2.25
UBXN4-206ENST00000470687 H0Y9P7 68 aa0.97□□□□□ -2.25
UBXN4-206ENST00000470687 J3QR89 54 aa0.97□□□□□ -2.25
UBXN4-206ENST00000470687 ACYP2P14621 99 aa0.97□□□□□ -2.25
UBXN4-206ENST00000470687 SPRR2EP22531 72 aa0.97□□□□□ -2.25
UBXN4-206ENST00000470687 SPRR2BP35325 72 aa0.97□□□□□ -2.25
UBXN4-206ENST00000470687 SPRR2AP35326 72 aa0.97□□□□□ -2.25
UBXN4-206ENST00000470687 DMAC1Q96GE9 116 aa0.96□□□□□ -2.26
UBXN4-206ENST00000470687 LINC00208Q96KT6 92 aa0.96□□□□□ -2.26
UBXN4-206ENST00000470687 MT1XP80297 61 aa0.95□□□□□ -2.26
UBXN4-206ENST00000470687 MIR22HGQ0VDD5 57 aa0.95□□□□□ -2.26
UBXN4-206ENST00000470687 LOC105371267A0A1B0GV96 52 aa0.94□□□□□ -2.26
UBXN4-206ENST00000470687 MT-ATP8P03928 68 aa0.94□□□□□ -2.26
UBXN4-206ENST00000470687 SPRR2DP22532 72 aa0.94□□□□□ -2.26
UBXN4-206ENST00000470687 NEBP20929 6669 aa0.93□□□□□ -2.26
UBXN4-206ENST00000470687 A0A087WVE0 104 aa0.93□□□□□ -2.26
UBXN4-206ENST00000470687 CHKB-CPT1BH3BT56 60 aa0.92□□□□□ -2.26
UBXN4-206ENST00000470687 KMT2DO14686 5537 aa0.91□□□□□ -2.26
UBXN4-206ENST00000470687 SERP1Q9Y6X1 66 aa0.91□□□□□ -2.26
UBXN4-206ENST00000470687 K7ERU9 68 aa0.9□□□□□ -2.27
UBXN4-206ENST00000470687 MT1GP13640 62 aa0.9□□□□□ -2.27
UBXN4-206ENST00000470687 MUC12Q9UKN1 5478 aa0.89□□□□□ -2.27
UBXN4-206ENST00000470687 KRTAP19-3Q7Z4W3 81 aa0.88□□□□□ -2.27
UBXN4-206ENST00000470687 C10orf95Q9H7T3 257 aa0.88□□□□□ -2.27
UBXN4-206ENST00000470687 CCDC179H3BU77 68 aa0.86□□□□□ -2.27
UBXN4-206ENST00000470687 SERP2Q8N6R1 65 aa0.86□□□□□ -2.27
UBXN4-206ENST00000470687 A0A0D9SG42 100 aa0.85□□□□□ -2.27
UBXN4-206ENST00000470687 MT1EP04732 61 aa0.85□□□□□ -2.27
UBXN4-206ENST00000470687 TNP1P09430 55 aa0.85□□□□□ -2.27
UBXN4-206ENST00000470687 KRTAP19-7Q3SYF9 63 aa0.85□□□□□ -2.27
UBXN4-206ENST00000470687 A0A1B0GV90 55 aa0.84□□□□□ -2.27
UBXN4-206ENST00000470687 PRR15LQ9BU68 103 aa0.84□□□□□ -2.27
UBXN4-206ENST00000470687 A0A1B0GU69 56 aa0.83□□□□□ -2.28
UBXN4-206ENST00000470687 MDN1Q9NU22 5596 aa0.82□□□□□ -2.28
UBXN4-206ENST00000470687 DSTQ03001 7570 aaKnown RBP0.82□□□□□ -2.28
UBXN4-206ENST00000470687 KRTAP19-5Q3LI72 72 aa0.81□□□□□ -2.28
UBXN4-206ENST00000470687 SPATA8Q6RVD6 105 aa0.81□□□□□ -2.28
UBXN4-206ENST00000470687 MT1MQ8N339 61 aa0.81□□□□□ -2.28
UBXN4-206ENST00000470687 MT1LQ93083 61 aa0.81□□□□□ -2.28
UBXN4-206ENST00000470687 MT4P47944 62 aa0.8□□□□□ -2.28
UBXN4-206ENST00000470687 ATP5EP56381 51 aaPredicted RBP0.8□□□□□ -2.28
UBXN4-206ENST00000470687 KRTAP5-10Q6L8G5 202 aa0.8□□□□□ -2.28
UBXN4-206ENST00000470687 H7BZZ5 65 aa0.79□□□□□ -2.28
UBXN4-206ENST00000470687 UQCR11O14957 56 aa0.79□□□□□ -2.28
UBXN4-206ENST00000470687 LINC01558Q9Y6Z2 57 aa0.77□□□□□ -2.29
UBXN4-206ENST00000470687 GPR98Q8WXG9 6306 aa0.76□□□□□ -2.29
UBXN4-206ENST00000470687 KRTAP20-2Q3LI61 65 aa0.76□□□□□ -2.29
UBXN4-206ENST00000470687 MUC5BQ9HC84 5762 aaPredicted RBP0.72□□□□□ -2.29
UBXN4-206ENST00000470687 MT1AP04731 61 aa0.71□□□□□ -2.3
UBXN4-206ENST00000470687 AHNAKQ09666 5890 aaKnown RBP0.7□□□□□ -2.3
UBXN4-206ENST00000470687 KRTAP6-1Q3LI64 71 aa0.66□□□□□ -2.3
UBXN4-206ENST00000470687 KRTAP6-2Q3LI66 62 aa0.66□□□□□ -2.3
UBXN4-206ENST00000470687 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.31
UBXN4-206ENST00000470687 AHNAK2Q8IVF2 5795 aa0.64□□□□□ -2.31
UBXN4-206ENST00000470687 SYNE1Q8NF91 8797 aaKnown RBP0.64□□□□□ -2.31
UBXN4-206ENST00000470687 MUC5ACP98088 5654 aa0.57□□□□□ -2.32
UBXN4-206ENST00000470687 PHGR1C9JFL3 82 aa0.46□□□□□ -2.34
UBXN4-206ENST00000470687 KRTAP21-1Q3LI58 79 aa0.39□□□□□ -2.35
UBXN4-206ENST00000470687 PRM1P04553 51 aa0.3□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 43.5 ms