RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 SPRR2GQ9BYE4 73 aa1.55□□□□□ -2.16
COL9A1-206ENST00000470652 H0YAA0 97 aa1.54□□□□□ -2.16
COL9A1-206ENST00000470652 KRTAP19-8Q3LI54 63 aa1.54□□□□□ -2.16
COL9A1-206ENST00000470652 R4GN34 69 aa1.54□□□□□ -2.16
COL9A1-206ENST00000470652 MACF1Q9UPN3 7388 aaKnown RBP1.54□□□□□ -2.16
COL9A1-206ENST00000470652 KMT2DO14686 5537 aa1.53□□□□□ -2.16
COL9A1-206ENST00000470652 A0A0D9SG42 100 aa1.53□□□□□ -2.16
COL9A1-206ENST00000470652 ATP5EP56381 51 aaPredicted RBP1.53□□□□□ -2.16
COL9A1-206ENST00000470652 SERP1Q9Y6X1 66 aa1.53□□□□□ -2.16
COL9A1-206ENST00000470652 PSPHP1O15172 72 aa1.52□□□□□ -2.17
COL9A1-206ENST00000470652 PRR15LQ9BU68 103 aa1.52□□□□□ -2.17
COL9A1-206ENST00000470652 A0A1B0GU69 56 aa1.51□□□□□ -2.17
COL9A1-206ENST00000470652 Q5VV11 94 aa1.51□□□□□ -2.17
COL9A1-206ENST00000470652 SPTSSBQ8NFR3 76 aa1.51□□□□□ -2.17
COL9A1-206ENST00000470652 LINC01558Q9Y6Z2 57 aa1.51□□□□□ -2.17
COL9A1-206ENST00000470652 SYNE2Q8WXH0 6885 aaKnown RBP1.5□□□□□ -2.17
COL9A1-206ENST00000470652 MT1XP80297 61 aa1.5□□□□□ -2.17
COL9A1-206ENST00000470652 A0A1B0GU33 70 aa1.49□□□□□ -2.17
COL9A1-206ENST00000470652 KRTAP19-6Q3LI70 58 aa1.49□□□□□ -2.17
COL9A1-206ENST00000470652 KRTAP12-1P59990 96 aa1.48□□□□□ -2.17
COL9A1-206ENST00000470652 CRIPTQ9P021 101 aa1.48□□□□□ -2.17
COL9A1-206ENST00000470652 Q1T7F1 81 aa1.47□□□□□ -2.17
COL9A1-206ENST00000470652 A6NN06 94 aa1.46□□□□□ -2.18
COL9A1-206ENST00000470652 RPS28P62857 69 aaKnown RBP1.45□□□□□ -2.18
COL9A1-206ENST00000470652 PLAC4Q8WY50 150 aa1.45□□□□□ -2.18
COL9A1-206ENST00000470652 MUC12Q9UKN1 5478 aa1.43□□□□□ -2.18
COL9A1-206ENST00000470652 A6NED7 52 aa1.43□□□□□ -2.18
COL9A1-206ENST00000470652 MIR22HGQ0VDD5 57 aa1.43□□□□□ -2.18
COL9A1-206ENST00000470652 C10orf95Q9H7T3 257 aa1.43□□□□□ -2.18
COL9A1-206ENST00000470652 UQCR11O14957 56 aa1.41□□□□□ -2.18
COL9A1-206ENST00000470652 NEBP20929 6669 aa1.4□□□□□ -2.19
COL9A1-206ENST00000470652 V9GYY9 64 aa1.4□□□□□ -2.19
COL9A1-206ENST00000470652 KRTAP25-1Q3LHN0 102 aa1.38□□□□□ -2.19
COL9A1-206ENST00000470652 PRO2289Q9P1D8 64 aa1.37□□□□□ -2.19
COL9A1-206ENST00000470652 MDN1Q9NU22 5596 aa1.37□□□□□ -2.19
COL9A1-206ENST00000470652 BRK1Q8WUW1 75 aa1.36□□□□□ -2.19
COL9A1-206ENST00000470652 CDC42SE1Q9NRR8 79 aa1.36□□□□□ -2.19
COL9A1-206ENST00000470652 KRTAP8-1Q8IUC2 63 aa1.35□□□□□ -2.19
COL9A1-206ENST00000470652 SPRR2FQ96RM1 72 aa1.35□□□□□ -2.19
COL9A1-206ENST00000470652 KRTAP19-5Q3LI72 72 aa1.34□□□□□ -2.19
COL9A1-206ENST00000470652 KRTAP19-7Q3SYF9 63 aa1.34□□□□□ -2.19
COL9A1-206ENST00000470652 MT1EP04732 61 aa1.31□□□□□ -2.2
COL9A1-206ENST00000470652 TNP1P09430 55 aa1.31□□□□□ -2.2
COL9A1-206ENST00000470652 K7ERS5 55 aa1.3□□□□□ -2.2
COL9A1-206ENST00000470652 SPRR2EP22531 72 aa1.3□□□□□ -2.2
COL9A1-206ENST00000470652 SPRR2BP35325 72 aa1.3□□□□□ -2.2
COL9A1-206ENST00000470652 SPRR2AP35326 72 aa1.3□□□□□ -2.2
COL9A1-206ENST00000470652 ROMO1P60602 79 aa1.3□□□□□ -2.2
COL9A1-206ENST00000470652 MT1LQ93083 61 aa1.27□□□□□ -2.21
COL9A1-206ENST00000470652 PRO0628Q9UI54 55 aa1.26□□□□□ -2.21
COL9A1-206ENST00000470652 DSTQ03001 7570 aaKnown RBP1.26□□□□□ -2.21
COL9A1-206ENST00000470652 SPRR2DP22532 72 aa1.25□□□□□ -2.21
COL9A1-206ENST00000470652 PMAIP1Q13794 54 aa1.25□□□□□ -2.21
COL9A1-206ENST00000470652 KRTAP19-3Q7Z4W3 81 aa1.25□□□□□ -2.21
COL9A1-206ENST00000470652 MT1MQ8N339 61 aa1.24□□□□□ -2.21
COL9A1-206ENST00000470652 KRTAP20-1Q3LI63 56 aa1.21□□□□□ -2.22
COL9A1-206ENST00000470652 MT1GP13640 62 aa1.2□□□□□ -2.22
COL9A1-206ENST00000470652 SYNE1Q8NF91 8797 aaKnown RBP1.17□□□□□ -2.22
COL9A1-206ENST00000470652 KRTAP2-3P0C7H8 128 aa1.17□□□□□ -2.22
COL9A1-206ENST00000470652 KTN1-AS1Q86SY8 53 aa1.17□□□□□ -2.22
COL9A1-206ENST00000470652 KRTAP2-4Q9BYR9 128 aa1.17□□□□□ -2.22
COL9A1-206ENST00000470652 KRTAP2-1Q9BYU5 128 aa1.14□□□□□ -2.23
COL9A1-206ENST00000470652 MT4P47944 62 aa1.13□□□□□ -2.23
COL9A1-206ENST00000470652 KRTAP6-1Q3LI64 71 aa1.1□□□□□ -2.23
COL9A1-206ENST00000470652 AHNAK2Q8IVF2 5795 aa1.08□□□□□ -2.24
COL9A1-206ENST00000470652 GPR98Q8WXG9 6306 aa1.08□□□□□ -2.24
COL9A1-206ENST00000470652 MT1AP04731 61 aa1.06□□□□□ -2.24
COL9A1-206ENST00000470652 KRTAP20-2Q3LI61 65 aa1.04□□□□□ -2.24
COL9A1-206ENST00000470652 KRTAP6-2Q3LI66 62 aa1.02□□□□□ -2.25
COL9A1-206ENST00000470652 KRTAP5-10Q6L8G5 202 aa0.96□□□□□ -2.26
COL9A1-206ENST00000470652 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
COL9A1-206ENST00000470652 MUC5ACP98088 5654 aa0.91□□□□□ -2.26
COL9A1-206ENST00000470652 AHNAKQ09666 5890 aaKnown RBP0.84□□□□□ -2.27
COL9A1-206ENST00000470652 MUC5BQ9HC84 5762 aaPredicted RBP0.82□□□□□ -2.28
COL9A1-206ENST00000470652 PRM1P04553 51 aa0.72□□□□□ -2.29
COL9A1-206ENST00000470652 INE1O15225 51 aa0.66□□□□□ -2.3
COL9A1-206ENST00000470652 PHGR1C9JFL3 82 aa0.61□□□□□ -2.31
COL9A1-206ENST00000470652 KRTAP21-1Q3LI58 79 aa0.4□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 80.8 ms