RNA–Protein interactions for RNA: ENST00000470396.1

PSMD4-210, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 1 (best)

Gene PSMD4, Length 338 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-210ENST00000470396 MIR22HGQ0VDD5 57 aa2.49□□□□□ -2.01
PSMD4-210ENST00000470396 KRTAP19-3Q7Z4W3 81 aa2.49□□□□□ -2.01
PSMD4-210ENST00000470396 TNP1P09430 55 aa2.48□□□□□ -2.01
PSMD4-210ENST00000470396 SVIPQ8NHG7 77 aa2.48□□□□□ -2.01
PSMD4-210ENST00000470396 V9GYY9 64 aa2.48□□□□□ -2.01
PSMD4-210ENST00000470396 KRTAP4-12Q9BQ66 201 aa2.47□□□□□ -2.01
PSMD4-210ENST00000470396 KRTAP9-9Q9BYP9 154 aa2.47□□□□□ -2.01
PSMD4-210ENST00000470396 KRTAP9-4Q9BYQ2 154 aa2.47□□□□□ -2.01
PSMD4-210ENST00000470396 KRTAP5-10Q6L8G5 202 aa2.45□□□□□ -2.02
PSMD4-210ENST00000470396 MT1LQ93083 61 aa2.45□□□□□ -2.02
PSMD4-210ENST00000470396 RPS28P62857 69 aaKnown RBP2.44□□□□□ -2.02
PSMD4-210ENST00000470396 HMCN1Q96RW7 5635 aa2.44□□□□□ -2.02
PSMD4-210ENST00000470396 MT1GP13640 62 aa2.42□□□□□ -2.02
PSMD4-210ENST00000470396 MT1MQ8N339 61 aa2.42□□□□□ -2.02
PSMD4-210ENST00000470396 A6NED7 52 aa2.4□□□□□ -2.03
PSMD4-210ENST00000470396 LCE1DQ5T752 114 aa2.4□□□□□ -2.03
PSMD4-210ENST00000470396 KRTAP4-7Q9BYR0 210 aa2.4□□□□□ -2.03
PSMD4-210ENST00000470396 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.03
PSMD4-210ENST00000470396 KRTAP12-3P60328 96 aa2.39□□□□□ -2.03
PSMD4-210ENST00000470396 KRTAP25-1Q3LHN0 102 aa2.39□□□□□ -2.03
PSMD4-210ENST00000470396 KRTAP5-7Q6L8G8 165 aa2.39□□□□□ -2.03
PSMD4-210ENST00000470396 KRTAP4-3Q9BYR4 195 aa2.39□□□□□ -2.03
PSMD4-210ENST00000470396 K7ERS5 55 aa2.37□□□□□ -2.03
PSMD4-210ENST00000470396 PP632Q6XCG6 107 aa2.36□□□□□ -2.03
PSMD4-210ENST00000470396 CDC42SE1Q9NRR8 79 aa2.32□□□□□ -2.04
PSMD4-210ENST00000470396 KRTAP23-1A1A580 65 aa2.3□□□□□ -2.04
PSMD4-210ENST00000470396 MT4P47944 62 aa2.3□□□□□ -2.04
PSMD4-210ENST00000470396 KRTAP4-2Q9BYR5 136 aa2.3□□□□□ -2.04
PSMD4-210ENST00000470396 ROMO1P60602 79 aa2.29□□□□□ -2.04
PSMD4-210ENST00000470396 LCE4AQ5TA78 99 aa2.29□□□□□ -2.04
PSMD4-210ENST00000470396 KRTAP5-3Q6L8H2 238 aa2.29□□□□□ -2.04
PSMD4-210ENST00000470396 SPRR5A0A1B0GTR4 108 aa2.28□□□□□ -2.04
PSMD4-210ENST00000470396 KRTAP5-4Q6L8H1 288 aa2.27□□□□□ -2.05
PSMD4-210ENST00000470396 KRTAP15-1Q3LI76 137 aa2.25□□□□□ -2.05
PSMD4-210ENST00000470396 KRTAP5-5Q701N2 237 aaPredicted RBP2.24□□□□□ -2.05
PSMD4-210ENST00000470396 LCE3CQ5T5A8 94 aa2.21□□□□□ -2.06
PSMD4-210ENST00000470396 KRTAP19-4Q3LI73 84 aa2.2□□□□□ -2.06
PSMD4-210ENST00000470396 KRTAP4-11Q9BYQ6 195 aa2.2□□□□□ -2.06
PSMD4-210ENST00000470396 PRO0628Q9UI54 55 aa2.17□□□□□ -2.06
PSMD4-210ENST00000470396 SYNE1Q8NF91 8797 aaKnown RBP2.16□□□□□ -2.06
PSMD4-210ENST00000470396 KRTAP9-6A8MVA2 160 aa2.15□□□□□ -2.07
PSMD4-210ENST00000470396 BRK1Q8WUW1 75 aa2.14□□□□□ -2.07
PSMD4-210ENST00000470396 KRTAP20-2Q3LI61 65 aa2.12□□□□□ -2.07
PSMD4-210ENST00000470396 AHNAKQ09666 5890 aaKnown RBP2.09□□□□□ -2.07
PSMD4-210ENST00000470396 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.08
PSMD4-210ENST00000470396 KRTAP12-4P60329 112 aa2.08□□□□□ -2.08
PSMD4-210ENST00000470396 KRTAP6-1Q3LI64 71 aa2.08□□□□□ -2.08
PSMD4-210ENST00000470396 MUC5ACP98088 5654 aa2.07□□□□□ -2.08
PSMD4-210ENST00000470396 MT1AP04731 61 aa2.07□□□□□ -2.08
PSMD4-210ENST00000470396 PMAIP1Q13794 54 aa2.02□□□□□ -2.09
PSMD4-210ENST00000470396 KRTAP5-2Q701N4 177 aa2.01□□□□□ -2.09
PSMD4-210ENST00000470396 KRTAP5-8O75690 187 aa1.98□□□□□ -2.09
PSMD4-210ENST00000470396 KTN1-AS1Q86SY8 53 aa1.98□□□□□ -2.09
PSMD4-210ENST00000470396 PRAC1Q96KF2 57 aa1.98□□□□□ -2.09
PSMD4-210ENST00000470396 KRTAP6-2Q3LI66 62 aa1.96□□□□□ -2.1
PSMD4-210ENST00000470396 H3BS24 57 aa1.93□□□□□ -2.1
PSMD4-210ENST00000470396 OBSCNQ5VST9 7968 aa1.9□□□□□ -2.11
PSMD4-210ENST00000470396 MT3P25713 68 aa1.86□□□□□ -2.11
PSMD4-210ENST00000470396 KRTAP5-1Q6L8H4 278 aa1.79□□□□□ -2.12
PSMD4-210ENST00000470396 A0A0A0MQY5 61 aa1.77□□□□□ -2.13
PSMD4-210ENST00000470396 LCE1EQ5T753 118 aa1.7□□□□□ -2.14
PSMD4-210ENST00000470396 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.6□□□□□ -2.15
PSMD4-210ENST00000470396 LCE1CQ5T751 118 aa1.59□□□□□ -2.15
PSMD4-210ENST00000470396 LCE1BQ5T7P3 118 aa1.59□□□□□ -2.15
PSMD4-210ENST00000470396 LCE3DQ9BYE3 92 aa1.59□□□□□ -2.15
PSMD4-210ENST00000470396 LUZP6Q538Z0 58 aa1.56□□□□□ -2.16
PSMD4-210ENST00000470396 NDUFAF8A1L188 74 aa1.53□□□□□ -2.16
PSMD4-210ENST00000470396 LCE3EQ5T5B0 92 aa1.51□□□□□ -2.17
PSMD4-210ENST00000470396 KRTAP5-11Q6L8G4 156 aa1.48□□□□□ -2.17
PSMD4-210ENST00000470396 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
PSMD4-210ENST00000470396 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
PSMD4-210ENST00000470396 LCE1FQ5T754 118 aa1.38□□□□□ -2.19
PSMD4-210ENST00000470396 INE1O15225 51 aa1.37□□□□□ -2.19
PSMD4-210ENST00000470396 KRTAP4-4Q9BYR3 166 aa1.33□□□□□ -2.2
PSMD4-210ENST00000470396 PRM1P04553 51 aa1.19□□□□□ -2.22
PSMD4-210ENST00000470396 MUC19Q7Z5P9 8384 aa1.18□□□□□ -2.22
PSMD4-210ENST00000470396 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
PSMD4-210ENST00000470396 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 79.3 ms