RNA–Protein interactions for RNA: ENST00000470279.1

STRC-208, Transcript of stereocilin, humanhuman

TSL 4

Gene STRC, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-208ENST00000470279 KRTAP4-3Q9BYR4 195 aa5.06□□□□□ -1.6
STRC-208ENST00000470279 KRTAP13-4Q3LI77 160 aa5.04□□□□□ -1.6
STRC-208ENST00000470279 KRTAP20-2Q3LI61 65 aa5.01□□□□□ -1.61
STRC-208ENST00000470279 MT1LQ93083 61 aa5.01□□□□□ -1.61
STRC-208ENST00000470279 CAMK2N1Q7Z7J9 78 aa4.99□□□□□ -1.61
STRC-208ENST00000470279 V9GYY9 64 aa4.99□□□□□ -1.61
STRC-208ENST00000470279 SPATA8Q6RVD6 105 aa4.97□□□□□ -1.61
STRC-208ENST00000470279 RPS28P62857 69 aaKnown RBP4.96□□□□□ -1.62
STRC-208ENST00000470279 SMIM26A0A096LP01 95 aa4.95□□□□□ -1.62
STRC-208ENST00000470279 A0A0D9SG42 100 aa4.95□□□□□ -1.62
STRC-208ENST00000470279 Q1T7F1 81 aa4.94□□□□□ -1.62
STRC-208ENST00000470279 UQCR11O14957 56 aa4.9□□□□□ -1.63
STRC-208ENST00000470279 AHNAKQ09666 5890 aaKnown RBP4.87□□□□□ -1.63
STRC-208ENST00000470279 KRTAP12-1P59990 96 aa4.85□□□□□ -1.63
STRC-208ENST00000470279 SPINT4Q6UDR6 99 aa4.85□□□□□ -1.63
STRC-208ENST00000470279 A8MU10 97 aa4.83□□□□□ -1.64
STRC-208ENST00000470279 PSPHP1O15172 72 aa4.83□□□□□ -1.64
STRC-208ENST00000470279 MIR22HGQ0VDD5 57 aa4.79□□□□□ -1.64
STRC-208ENST00000470279 MUC5ACP98088 5654 aa4.78□□□□□ -1.64
STRC-208ENST00000470279 KRTAP5-5Q701N2 237 aaPredicted RBP4.78□□□□□ -1.64
STRC-208ENST00000470279 KRTAP12-4P60329 112 aa4.77□□□□□ -1.65
STRC-208ENST00000470279 SYNE1Q8NF91 8797 aaKnown RBP4.76□□□□□ -1.65
STRC-208ENST00000470279 KRTAP4-7Q9BYR0 210 aa4.75□□□□□ -1.65
STRC-208ENST00000470279 MUC5BQ9HC84 5762 aaPredicted RBP4.74□□□□□ -1.65
STRC-208ENST00000470279 A6NED7 52 aa4.71□□□□□ -1.66
STRC-208ENST00000470279 KRTAP4-11Q9BYQ6 195 aa4.71□□□□□ -1.66
STRC-208ENST00000470279 C10orf95Q9H7T3 257 aa4.71□□□□□ -1.66
STRC-208ENST00000470279 K7ERS5 55 aa4.69□□□□□ -1.66
STRC-208ENST00000470279 LCE3AQ5TA76 89 aa4.65□□□□□ -1.67
STRC-208ENST00000470279 KRTAP5-8O75690 187 aa4.6□□□□□ -1.67
STRC-208ENST00000470279 TNP1P09430 55 aa4.59□□□□□ -1.67
STRC-208ENST00000470279 CDC42SE1Q9NRR8 79 aa4.59□□□□□ -1.67
STRC-208ENST00000470279 LOC100996750A0A140TA64 210 aa4.53□□□□□ -1.68
STRC-208ENST00000470279 KRTAP5-2Q701N4 177 aa4.5□□□□□ -1.69
STRC-208ENST00000470279 KRTAP25-1Q3LHN0 102 aa4.48□□□□□ -1.69
STRC-208ENST00000470279 KRTAP12-3P60328 96 aa4.45□□□□□ -1.7
STRC-208ENST00000470279 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
STRC-208ENST00000470279 ROMO1P60602 79 aa4.4□□□□□ -1.71
STRC-208ENST00000470279 OBSCNQ5VST9 7968 aa4.37□□□□□ -1.71
STRC-208ENST00000470279 KRTAP23-1A1A580 65 aa4.36□□□□□ -1.71
STRC-208ENST00000470279 BRK1Q8WUW1 75 aa4.36□□□□□ -1.71
STRC-208ENST00000470279 KRTAP6-1Q3LI64 71 aa4.28□□□□□ -1.72
STRC-208ENST00000470279 SVIPQ8NHG7 77 aa4.27□□□□□ -1.73
STRC-208ENST00000470279 MT1AP04731 61 aa4.25□□□□□ -1.73
STRC-208ENST00000470279 KRTAP6-2Q3LI66 62 aa4.2□□□□□ -1.74
STRC-208ENST00000470279 KRTAP9-4Q9BYQ2 154 aa4.16□□□□□ -1.74
STRC-208ENST00000470279 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.75
STRC-208ENST00000470279 KRTAP5-1Q6L8H4 278 aa4.15□□□□□ -1.75
STRC-208ENST00000470279 PMAIP1Q13794 54 aa4.13□□□□□ -1.75
STRC-208ENST00000470279 KRTAP15-1Q3LI76 137 aa4.09□□□□□ -1.75
STRC-208ENST00000470279 PRO0628Q9UI54 55 aa4.09□□□□□ -1.75
STRC-208ENST00000470279 LCE3CQ5T5A8 94 aa4.03□□□□□ -1.76
STRC-208ENST00000470279 MT3P25713 68 aa3.89□□□□□ -1.79
STRC-208ENST00000470279 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
STRC-208ENST00000470279 KTN1-AS1Q86SY8 53 aa3.85□□□□□ -1.79
STRC-208ENST00000470279 PRAC1Q96KF2 57 aa3.85□□□□□ -1.79
STRC-208ENST00000470279 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
STRC-208ENST00000470279 KRTAP4-2Q9BYR5 136 aa3.61□□□□□ -1.83
STRC-208ENST00000470279 LCE1BQ5T7P3 118 aa3.57□□□□□ -1.84
STRC-208ENST00000470279 KRTAP4-12Q9BQ66 201 aa3.49□□□□□ -1.85
STRC-208ENST00000470279 LCE1CQ5T751 118 aa3.47□□□□□ -1.85
STRC-208ENST00000470279 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
STRC-208ENST00000470279 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
STRC-208ENST00000470279 PHGR1C9JFL3 82 aa3.26□□□□□ -1.89
STRC-208ENST00000470279 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
STRC-208ENST00000470279 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.09□□□□□ -1.91
STRC-208ENST00000470279 H3BS24 57 aa2.93□□□□□ -1.94
STRC-208ENST00000470279 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
STRC-208ENST00000470279 NDUFAF8A1L188 74 aa2.88□□□□□ -1.95
STRC-208ENST00000470279 KRTAP21-2Q3LI59 83 aa2.82□□□□□ -1.96
STRC-208ENST00000470279 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
STRC-208ENST00000470279 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
STRC-208ENST00000470279 A0A0A0MQY5 61 aa2.69□□□□□ -1.98
STRC-208ENST00000470279 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
STRC-208ENST00000470279 INE1O15225 51 aa2.48□□□□□ -2.01
STRC-208ENST00000470279 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
STRC-208ENST00000470279 PRM1P04553 51 aa2.24□□□□□ -2.05
STRC-208ENST00000470279 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 59 ms