RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 KRTAP19-5Q3LI72 72 aa4.19□□□□□ -1.74
SREBF1-209ENST00000470247 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
SREBF1-209ENST00000470247 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
SREBF1-209ENST00000470247 MT1EP04732 61 aa4.15□□□□□ -1.75
SREBF1-209ENST00000470247 KRTAP12-3P60328 96 aa4.1□□□□□ -1.75
SREBF1-209ENST00000470247 LCE1AQ5T7P2 110 aa4.1□□□□□ -1.75
SREBF1-209ENST00000470247 KRTAP20-1Q3LI63 56 aa4.09□□□□□ -1.75
SREBF1-209ENST00000470247 PP632Q6XCG6 107 aa4.09□□□□□ -1.75
SREBF1-209ENST00000470247 MUC12Q9UKN1 5478 aa4.05□□□□□ -1.76
SREBF1-209ENST00000470247 SPRR2EP22531 72 aa4.05□□□□□ -1.76
SREBF1-209ENST00000470247 SPRR2BP35325 72 aa4.05□□□□□ -1.76
SREBF1-209ENST00000470247 SPRR2AP35326 72 aa4.05□□□□□ -1.76
SREBF1-209ENST00000470247 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
SREBF1-209ENST00000470247 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
SREBF1-209ENST00000470247 KRTAP19-3Q7Z4W3 81 aa4.03□□□□□ -1.76
SREBF1-209ENST00000470247 MT1LQ93083 61 aa4.03□□□□□ -1.76
SREBF1-209ENST00000470247 PRAC1Q96KF2 57 aa4.01□□□□□ -1.77
SREBF1-209ENST00000470247 LCE5AQ5TCM9 118 aa4□□□□□ -1.77
SREBF1-209ENST00000470247 MT1GP13640 62 aa3.97□□□□□ -1.77
SREBF1-209ENST00000470247 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
SREBF1-209ENST00000470247 KTN1-AS1Q86SY8 53 aa3.96□□□□□ -1.78
SREBF1-209ENST00000470247 MDN1Q9NU22 5596 aa3.95□□□□□ -1.78
SREBF1-209ENST00000470247 GPR98Q8WXG9 6306 aa3.92□□□□□ -1.78
SREBF1-209ENST00000470247 MT1MQ8N339 61 aa3.92□□□□□ -1.78
SREBF1-209ENST00000470247 SPRR2DP22532 72 aa3.9□□□□□ -1.79
SREBF1-209ENST00000470247 KRTAP4-7Q9BYR0 210 aa3.9□□□□□ -1.79
SREBF1-209ENST00000470247 KRTAP4-9Q9BYQ8 210 aa3.88□□□□□ -1.79
SREBF1-209ENST00000470247 KRTAP4-3Q9BYR4 195 aa3.84□□□□□ -1.79
SREBF1-209ENST00000470247 KRTAP2-3P0C7H8 128 aa3.82□□□□□ -1.8
SREBF1-209ENST00000470247 LCE3CQ5T5A8 94 aa3.82□□□□□ -1.8
SREBF1-209ENST00000470247 KRTAP2-4Q9BYR9 128 aa3.82□□□□□ -1.8
SREBF1-209ENST00000470247 KRTAP4-11Q9BYQ6 195 aa3.8□□□□□ -1.8
SREBF1-209ENST00000470247 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
SREBF1-209ENST00000470247 KRTAP2-2Q9BYT5 123 aa3.71□□□□□ -1.82
SREBF1-209ENST00000470247 KRTAP2-1Q9BYU5 128 aa3.71□□□□□ -1.82
SREBF1-209ENST00000470247 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
SREBF1-209ENST00000470247 DSTQ03001 7570 aaKnown RBP3.63□□□□□ -1.83
SREBF1-209ENST00000470247 SPRR5A0A1B0GTR4 108 aa3.59□□□□□ -1.83
SREBF1-209ENST00000470247 KRTAP5-5Q701N2 237 aaPredicted RBP3.59□□□□□ -1.83
SREBF1-209ENST00000470247 KRTAP5-4Q6L8H1 288 aa3.54□□□□□ -1.84
SREBF1-209ENST00000470247 MT1AP04731 61 aa3.43□□□□□ -1.86
SREBF1-209ENST00000470247 KRTAP6-1Q3LI64 71 aa3.41□□□□□ -1.86
SREBF1-209ENST00000470247 MT4P47944 62 aa3.4□□□□□ -1.87
SREBF1-209ENST00000470247 SYNE1Q8NF91 8797 aaKnown RBP3.39□□□□□ -1.87
SREBF1-209ENST00000470247 KRTAP12-4P60329 112 aa3.33□□□□□ -1.88
SREBF1-209ENST00000470247 AHNAK2Q8IVF2 5795 aa3.31□□□□□ -1.88
SREBF1-209ENST00000470247 KRTAP20-2Q3LI61 65 aa3.3□□□□□ -1.88
SREBF1-209ENST00000470247 HMCN1Q96RW7 5635 aa3.29□□□□□ -1.88
SREBF1-209ENST00000470247 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
SREBF1-209ENST00000470247 KRTAP5-10Q6L8G5 202 aa3.22□□□□□ -1.89
SREBF1-209ENST00000470247 KRTAP5-3Q6L8H2 238 aa3.22□□□□□ -1.89
SREBF1-209ENST00000470247 KRTAP5-7Q6L8G8 165 aa3.19□□□□□ -1.9
SREBF1-209ENST00000470247 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
SREBF1-209ENST00000470247 MT3P25713 68 aa3.16□□□□□ -1.9
SREBF1-209ENST00000470247 KRTAP6-2Q3LI66 62 aa3.16□□□□□ -1.9
SREBF1-209ENST00000470247 NDUFAF8A1L188 74 aa3.01□□□□□ -1.93
SREBF1-209ENST00000470247 AHNAKQ09666 5890 aaKnown RBP2.96□□□□□ -1.94
SREBF1-209ENST00000470247 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
SREBF1-209ENST00000470247 OBSCNQ5VST9 7968 aa2.84□□□□□ -1.96
SREBF1-209ENST00000470247 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
SREBF1-209ENST00000470247 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
SREBF1-209ENST00000470247 MUC5ACP98088 5654 aa2.82□□□□□ -1.96
SREBF1-209ENST00000470247 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
SREBF1-209ENST00000470247 KRTAP5-1Q6L8H4 278 aa2.78□□□□□ -1.96
SREBF1-209ENST00000470247 LCE1EQ5T753 118 aa2.77□□□□□ -1.97
SREBF1-209ENST00000470247 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
SREBF1-209ENST00000470247 LCE1CQ5T751 118 aa2.57□□□□□ -2
SREBF1-209ENST00000470247 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
SREBF1-209ENST00000470247 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
SREBF1-209ENST00000470247 INE1O15225 51 aa2.47□□□□□ -2.01
SREBF1-209ENST00000470247 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.4□□□□□ -2.03
SREBF1-209ENST00000470247 PRM1P04553 51 aa2.26□□□□□ -2.05
SREBF1-209ENST00000470247 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
SREBF1-209ENST00000470247 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
SREBF1-209ENST00000470247 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
SREBF1-209ENST00000470247 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
SREBF1-209ENST00000470247 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
SREBF1-209ENST00000470247 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 9.9 ms