RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 KRTAP19-3Q7Z4W3 81 aa4.58□□□□□ -1.68
SPTLC1-204ENST00000469778 KRTAP2-3P0C7H8 128 aa4.56□□□□□ -1.68
SPTLC1-204ENST00000469778 MT1GP13640 62 aa4.56□□□□□ -1.68
SPTLC1-204ENST00000469778 SPRR2DP22532 72 aa4.56□□□□□ -1.68
SPTLC1-204ENST00000469778 LCE5AQ5TCM9 118 aa4.56□□□□□ -1.68
SPTLC1-204ENST00000469778 KRTAP2-4Q9BYR9 128 aa4.56□□□□□ -1.68
SPTLC1-204ENST00000469778 KRTAP20-1Q3LI63 56 aa4.55□□□□□ -1.68
SPTLC1-204ENST00000469778 KRTAP19-4Q3LI73 84 aa4.52□□□□□ -1.69
SPTLC1-204ENST00000469778 MT1LQ93083 61 aa4.5□□□□□ -1.69
SPTLC1-204ENST00000469778 KRTAP2-2Q9BYT5 123 aa4.43□□□□□ -1.7
SPTLC1-204ENST00000469778 KRTAP2-1Q9BYU5 128 aa4.43□□□□□ -1.7
SPTLC1-204ENST00000469778 PMAIP1Q13794 54 aa4.42□□□□□ -1.7
SPTLC1-204ENST00000469778 LCE3BQ5TA77 95 aa4.42□□□□□ -1.7
SPTLC1-204ENST00000469778 MT1MQ8N339 61 aa4.41□□□□□ -1.7
SPTLC1-204ENST00000469778 KRTAP15-1Q3LI76 137 aa4.4□□□□□ -1.71
SPTLC1-204ENST00000469778 PRO0628Q9UI54 55 aa4.37□□□□□ -1.71
SPTLC1-204ENST00000469778 DSTQ03001 7570 aaKnown RBP4.28□□□□□ -1.72
SPTLC1-204ENST00000469778 LCE3CQ5T5A8 94 aa4.25□□□□□ -1.73
SPTLC1-204ENST00000469778 KRTAP4-7Q9BYR0 210 aa4.22□□□□□ -1.73
SPTLC1-204ENST00000469778 KRTAP4-3Q9BYR4 195 aa4.21□□□□□ -1.74
SPTLC1-204ENST00000469778 LCE4AQ5TA78 99 aa4.12□□□□□ -1.75
SPTLC1-204ENST00000469778 KTN1-AS1Q86SY8 53 aa4.09□□□□□ -1.75
SPTLC1-204ENST00000469778 KRTAP5-4Q6L8H1 288 aa4.07□□□□□ -1.76
SPTLC1-204ENST00000469778 PRAC1Q96KF2 57 aa4.07□□□□□ -1.76
SPTLC1-204ENST00000469778 KRTAP5-5Q701N2 237 aaPredicted RBP4.03□□□□□ -1.76
SPTLC1-204ENST00000469778 LOC100996750A0A140TA64 210 aa3.98□□□□□ -1.77
SPTLC1-204ENST00000469778 KRTAP4-9Q9BYQ8 210 aa3.97□□□□□ -1.77
SPTLC1-204ENST00000469778 LCE1DQ5T752 114 aa3.95□□□□□ -1.78
SPTLC1-204ENST00000469778 KRTAP4-6Q9BYQ5 205 aa3.95□□□□□ -1.78
SPTLC1-204ENST00000469778 MT4P47944 62 aa3.93□□□□□ -1.78
SPTLC1-204ENST00000469778 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
SPTLC1-204ENST00000469778 KRTAP12-4P60329 112 aa3.92□□□□□ -1.78
SPTLC1-204ENST00000469778 HMCN1Q96RW7 5635 aa3.91□□□□□ -1.78
SPTLC1-204ENST00000469778 SPRR5A0A1B0GTR4 108 aa3.89□□□□□ -1.79
SPTLC1-204ENST00000469778 MT1AP04731 61 aa3.86□□□□□ -1.79
SPTLC1-204ENST00000469778 SVIPQ8NHG7 77 aa3.83□□□□□ -1.8
SPTLC1-204ENST00000469778 KRTAP20-2Q3LI61 65 aa3.79□□□□□ -1.8
SPTLC1-204ENST00000469778 SYNE1Q8NF91 8797 aaKnown RBP3.77□□□□□ -1.81
SPTLC1-204ENST00000469778 KRTAP6-1Q3LI64 71 aa3.77□□□□□ -1.81
SPTLC1-204ENST00000469778 GPR98Q8WXG9 6306 aa3.73□□□□□ -1.81
SPTLC1-204ENST00000469778 KRTAP9-4Q9BYQ2 154 aa3.71□□□□□ -1.82
SPTLC1-204ENST00000469778 KRTAP5-3Q6L8H2 238 aa3.67□□□□□ -1.82
SPTLC1-204ENST00000469778 AHNAK2Q8IVF2 5795 aa3.66□□□□□ -1.82
SPTLC1-204ENST00000469778 KRTAP5-2Q701N4 177 aa3.62□□□□□ -1.83
SPTLC1-204ENST00000469778 MT3P25713 68 aa3.56□□□□□ -1.84
SPTLC1-204ENST00000469778 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
SPTLC1-204ENST00000469778 LUZP6Q538Z0 58 aa3.55□□□□□ -1.84
SPTLC1-204ENST00000469778 KRTAP5-10Q6L8G5 202 aa3.54□□□□□ -1.84
SPTLC1-204ENST00000469778 KRTAP4-12Q9BQ66 201 aa3.54□□□□□ -1.84
SPTLC1-204ENST00000469778 KRTAP4-11Q9BYQ6 195 aa3.41□□□□□ -1.86
SPTLC1-204ENST00000469778 KRTAP5-7Q6L8G8 165 aa3.4□□□□□ -1.87
SPTLC1-204ENST00000469778 H3BS24 57 aa3.38□□□□□ -1.87
SPTLC1-204ENST00000469778 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
SPTLC1-204ENST00000469778 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
SPTLC1-204ENST00000469778 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
SPTLC1-204ENST00000469778 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
SPTLC1-204ENST00000469778 KRTAP5-1Q6L8H4 278 aa3.16□□□□□ -1.9
SPTLC1-204ENST00000469778 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
SPTLC1-204ENST00000469778 KRTAP4-2Q9BYR5 136 aa3.06□□□□□ -1.92
SPTLC1-204ENST00000469778 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
SPTLC1-204ENST00000469778 NDUFAF8A1L188 74 aa3.05□□□□□ -1.92
SPTLC1-204ENST00000469778 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
SPTLC1-204ENST00000469778 AHNAKQ09666 5890 aaKnown RBP2.98□□□□□ -1.93
SPTLC1-204ENST00000469778 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
SPTLC1-204ENST00000469778 LCE1BQ5T7P3 118 aa2.98□□□□□ -1.93
SPTLC1-204ENST00000469778 MUC5BQ9HC84 5762 aaPredicted RBP2.98□□□□□ -1.93
SPTLC1-204ENST00000469778 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
SPTLC1-204ENST00000469778 A0A0A0MQY5 61 aa2.67□□□□□ -1.98
SPTLC1-204ENST00000469778 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
SPTLC1-204ENST00000469778 INE1O15225 51 aa2.61□□□□□ -1.99
SPTLC1-204ENST00000469778 LCE1FQ5T754 118 aa2.57□□□□□ -2
SPTLC1-204ENST00000469778 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
SPTLC1-204ENST00000469778 PRM1P04553 51 aa2.37□□□□□ -2.03
SPTLC1-204ENST00000469778 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
SPTLC1-204ENST00000469778 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
SPTLC1-204ENST00000469778 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
SPTLC1-204ENST00000469778 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
SPTLC1-204ENST00000469778 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 90.2 ms