RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 KRTAP13-4Q3LI77 160 aa6.43□□□□□ -1.38
TTC28-205ENST00000469670 MT1LQ93083 61 aa6.42□□□□□ -1.38
TTC28-205ENST00000469670 KRTAP4-3Q9BYR4 195 aa6.42□□□□□ -1.38
TTC28-205ENST00000469670 LINC01558Q9Y6Z2 57 aa6.42□□□□□ -1.38
TTC28-205ENST00000469670 SPRR5A0A1B0GTR4 108 aa6.38□□□□□ -1.39
TTC28-205ENST00000469670 PRR15LQ9BU68 103 aa6.33□□□□□ -1.4
TTC28-205ENST00000469670 A0A1B0GU69 56 aa6.31□□□□□ -1.4
TTC28-205ENST00000469670 PSPHP1O15172 72 aa6.31□□□□□ -1.4
TTC28-205ENST00000469670 SEC61GP60059 68 aa6.3□□□□□ -1.4
TTC28-205ENST00000469670 KRTAP20-2Q3LI61 65 aa6.27□□□□□ -1.41
TTC28-205ENST00000469670 A0A1B0GU33 70 aa6.14□□□□□ -1.43
TTC28-205ENST00000469670 A6NED7 52 aa6.14□□□□□ -1.43
TTC28-205ENST00000469670 C10orf95Q9H7T3 257 aa6.14□□□□□ -1.43
TTC28-205ENST00000469670 UQCR11O14957 56 aa6.12□□□□□ -1.43
TTC28-205ENST00000469670 SPINT4Q6UDR6 99 aa6.12□□□□□ -1.43
TTC28-205ENST00000469670 KRTAP4-7Q9BYR0 210 aa6.09□□□□□ -1.43
TTC28-205ENST00000469670 LCE3AQ5TA76 89 aa6.08□□□□□ -1.44
TTC28-205ENST00000469670 KRTAP12-4P60329 112 aa6.05□□□□□ -1.44
TTC28-205ENST00000469670 MIR22HGQ0VDD5 57 aa6.05□□□□□ -1.44
TTC28-205ENST00000469670 KRTAP5-5Q701N2 237 aaPredicted RBP6.05□□□□□ -1.44
TTC28-205ENST00000469670 SPATA8Q6RVD6 105 aa6.04□□□□□ -1.44
TTC28-205ENST00000469670 BRK1Q8WUW1 75 aa6.04□□□□□ -1.44
TTC28-205ENST00000469670 CDC42SE1Q9NRR8 79 aa6.03□□□□□ -1.44
TTC28-205ENST00000469670 KRTAP12-1P59990 96 aa6.01□□□□□ -1.45
TTC28-205ENST00000469670 A8MU10 97 aa5.96□□□□□ -1.46
TTC28-205ENST00000469670 SYNE1Q8NF91 8797 aaKnown RBP5.91□□□□□ -1.46
TTC28-205ENST00000469670 PRO0628Q9UI54 55 aa5.91□□□□□ -1.46
TTC28-205ENST00000469670 TNP1P09430 55 aa5.9□□□□□ -1.46
TTC28-205ENST00000469670 KRTAP4-11Q9BYQ6 195 aa5.87□□□□□ -1.47
TTC28-205ENST00000469670 KRTAP12-3P60328 96 aa5.84□□□□□ -1.47
TTC28-205ENST00000469670 AHNAKQ09666 5890 aaKnown RBP5.8□□□□□ -1.48
TTC28-205ENST00000469670 LOC100996750A0A140TA64 210 aa5.8□□□□□ -1.48
TTC28-205ENST00000469670 K7ERS5 55 aa5.8□□□□□ -1.48
TTC28-205ENST00000469670 MUC5ACP98088 5654 aa5.78□□□□□ -1.48
TTC28-205ENST00000469670 MUC5BQ9HC84 5762 aaPredicted RBP5.74□□□□□ -1.49
TTC28-205ENST00000469670 PMAIP1Q13794 54 aa5.72□□□□□ -1.49
TTC28-205ENST00000469670 KRTAP5-8O75690 187 aa5.69□□□□□ -1.5
TTC28-205ENST00000469670 KRTAP5-2Q701N4 177 aa5.66□□□□□ -1.5
TTC28-205ENST00000469670 ROMO1P60602 79 aa5.54□□□□□ -1.52
TTC28-205ENST00000469670 KRTAP9-9Q9BYP9 154 aa5.5□□□□□ -1.53
TTC28-205ENST00000469670 KRTAP6-1Q3LI64 71 aa5.47□□□□□ -1.53
TTC28-205ENST00000469670 KTN1-AS1Q86SY8 53 aa5.47□□□□□ -1.53
TTC28-205ENST00000469670 MT1AP04731 61 aa5.45□□□□□ -1.54
TTC28-205ENST00000469670 KRTAP19-4Q3LI73 84 aa5.44□□□□□ -1.54
TTC28-205ENST00000469670 OBSCNQ5VST9 7968 aa5.41□□□□□ -1.54
TTC28-205ENST00000469670 KRTAP25-1Q3LHN0 102 aa5.34□□□□□ -1.55
TTC28-205ENST00000469670 KRTAP6-2Q3LI66 62 aa5.34□□□□□ -1.55
TTC28-205ENST00000469670 SVIPQ8NHG7 77 aa5.34□□□□□ -1.55
TTC28-205ENST00000469670 PRAC1Q96KF2 57 aa5.34□□□□□ -1.55
TTC28-205ENST00000469670 KRTAP9-4Q9BYQ2 154 aa5.34□□□□□ -1.55
TTC28-205ENST00000469670 LCE3CQ5T5A8 94 aa5.31□□□□□ -1.56
TTC28-205ENST00000469670 KRTAP15-1Q3LI76 137 aa5.25□□□□□ -1.57
TTC28-205ENST00000469670 KRTAP5-1Q6L8H4 278 aa5.2□□□□□ -1.58
TTC28-205ENST00000469670 KRTAP23-1A1A580 65 aa5.17□□□□□ -1.58
TTC28-205ENST00000469670 KRTAP9-6A8MVA2 160 aa5.04□□□□□ -1.6
TTC28-205ENST00000469670 MT3P25713 68 aa5.02□□□□□ -1.61
TTC28-205ENST00000469670 LCE1EQ5T753 118 aa4.74□□□□□ -1.65
TTC28-205ENST00000469670 KRTAP4-2Q9BYR5 136 aa4.55□□□□□ -1.68
TTC28-205ENST00000469670 LCE1BQ5T7P3 118 aa4.54□□□□□ -1.68
TTC28-205ENST00000469670 LCE1CQ5T751 118 aa4.41□□□□□ -1.7
TTC28-205ENST00000469670 LUZP6Q538Z0 58 aa4.38□□□□□ -1.71
TTC28-205ENST00000469670 KRTAP4-12Q9BQ66 201 aa4.36□□□□□ -1.71
TTC28-205ENST00000469670 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
TTC28-205ENST00000469670 KRTAP5-11Q6L8G4 156 aa4.13□□□□□ -1.75
TTC28-205ENST00000469670 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
TTC28-205ENST00000469670 PHGR1C9JFL3 82 aa4□□□□□ -1.77
TTC28-205ENST00000469670 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
TTC28-205ENST00000469670 A0A0A0MQY5 61 aa3.74□□□□□ -1.81
TTC28-205ENST00000469670 LCE3DQ9BYE3 92 aa3.7□□□□□ -1.82
TTC28-205ENST00000469670 H3BS24 57 aa3.65□□□□□ -1.83
TTC28-205ENST00000469670 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
TTC28-205ENST00000469670 INE1O15225 51 aa3.54□□□□□ -1.84
TTC28-205ENST00000469670 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
TTC28-205ENST00000469670 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
TTC28-205ENST00000469670 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
TTC28-205ENST00000469670 KRTAP21-1Q3LI58 79 aa3.04□□□□□ -1.92
TTC28-205ENST00000469670 PRM1P04553 51 aa2.88□□□□□ -1.95
TTC28-205ENST00000469670 MUC16Q8WXI7 14507 aa2.39□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 38.7 ms