RNA–Protein interactions for RNA: ENST00000469608.5

CALCA-204, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best)

Gene CALCA, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-204ENST00000469608 MT4P47944 62 aa4.96□□□□□ -1.62
CALCA-204ENST00000469608 KRTAP4-3Q9BYR4 195 aa4.96□□□□□ -1.62
CALCA-204ENST00000469608 LCE4AQ5TA78 99 aa4.94□□□□□ -1.62
CALCA-204ENST00000469608 HMCN1Q96RW7 5635 aa4.94□□□□□ -1.62
CALCA-204ENST00000469608 ATP5EP56381 51 aaPredicted RBP4.92□□□□□ -1.62
CALCA-204ENST00000469608 LINC01558Q9Y6Z2 57 aa4.87□□□□□ -1.63
CALCA-204ENST00000469608 AHNAK2Q8IVF2 5795 aa4.83□□□□□ -1.64
CALCA-204ENST00000469608 KRTAP12-3P60328 96 aa4.83□□□□□ -1.64
CALCA-204ENST00000469608 KRTAP5-4Q6L8H1 288 aa4.83□□□□□ -1.64
CALCA-204ENST00000469608 KRTAP4-7Q9BYR0 210 aa4.82□□□□□ -1.64
CALCA-204ENST00000469608 UQCR11O14957 56 aa4.78□□□□□ -1.64
CALCA-204ENST00000469608 TMEM258P61165 79 aa4.75□□□□□ -1.65
CALCA-204ENST00000469608 MIR22HGQ0VDD5 57 aa4.69□□□□□ -1.66
CALCA-204ENST00000469608 KRTAP25-1Q3LHN0 102 aa4.67□□□□□ -1.66
CALCA-204ENST00000469608 KRTAP5-10Q6L8G5 202 aa4.67□□□□□ -1.66
CALCA-204ENST00000469608 K7ERS5 55 aa4.62□□□□□ -1.67
CALCA-204ENST00000469608 KRTAP5-5Q701N2 237 aaPredicted RBP4.61□□□□□ -1.67
CALCA-204ENST00000469608 KRTAP20-2Q3LI61 65 aa4.59□□□□□ -1.67
CALCA-204ENST00000469608 KRTAP9-9Q9BYP9 154 aa4.59□□□□□ -1.67
CALCA-204ENST00000469608 KRTAP9-4Q9BYQ2 154 aa4.59□□□□□ -1.67
CALCA-204ENST00000469608 PSPHP1O15172 72 aa4.56□□□□□ -1.68
CALCA-204ENST00000469608 KRTAP4-12Q9BQ66 201 aa4.56□□□□□ -1.68
CALCA-204ENST00000469608 KRTAP5-3Q6L8H2 238 aa4.55□□□□□ -1.68
CALCA-204ENST00000469608 SPRR5A0A1B0GTR4 108 aa4.53□□□□□ -1.68
CALCA-204ENST00000469608 KRTAP12-4P60329 112 aa4.53□□□□□ -1.68
CALCA-204ENST00000469608 KRTAP5-7Q6L8G8 165 aa4.5□□□□□ -1.69
CALCA-204ENST00000469608 V9GYY9 64 aa4.5□□□□□ -1.69
CALCA-204ENST00000469608 KRTAP15-1Q3LI76 137 aa4.47□□□□□ -1.69
CALCA-204ENST00000469608 Q1T7F1 81 aa4.46□□□□□ -1.7
CALCA-204ENST00000469608 SYNE1Q8NF91 8797 aaKnown RBP4.45□□□□□ -1.7
CALCA-204ENST00000469608 KRTAP19-4Q3LI73 84 aa4.45□□□□□ -1.7
CALCA-204ENST00000469608 KRTAP23-1A1A580 65 aa4.44□□□□□ -1.7
CALCA-204ENST00000469608 LCE3CQ5T5A8 94 aa4.43□□□□□ -1.7
CALCA-204ENST00000469608 A6NED7 52 aa4.4□□□□□ -1.71
CALCA-204ENST00000469608 CDC42SE1Q9NRR8 79 aa4.36□□□□□ -1.71
CALCA-204ENST00000469608 MT1AP04731 61 aa4.28□□□□□ -1.72
CALCA-204ENST00000469608 ROMO1P60602 79 aa4.28□□□□□ -1.72
CALCA-204ENST00000469608 KRTAP6-1Q3LI64 71 aa4.28□□□□□ -1.72
CALCA-204ENST00000469608 RPS28P62857 69 aaKnown RBP4.25□□□□□ -1.73
CALCA-204ENST00000469608 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
CALCA-204ENST00000469608 KRTAP5-2Q701N4 177 aa4.22□□□□□ -1.73
CALCA-204ENST00000469608 KRTAP4-11Q9BYQ6 195 aa4.21□□□□□ -1.74
CALCA-204ENST00000469608 KRTAP9-6A8MVA2 160 aa4.19□□□□□ -1.74
CALCA-204ENST00000469608 KRTAP6-2Q3LI66 62 aa4.11□□□□□ -1.75
CALCA-204ENST00000469608 H3BS24 57 aa4.1□□□□□ -1.75
CALCA-204ENST00000469608 KRTAP5-8O75690 187 aa4.06□□□□□ -1.76
CALCA-204ENST00000469608 PCP4P48539 62 aa4.05□□□□□ -1.76
CALCA-204ENST00000469608 AHNAKQ09666 5890 aaKnown RBP3.99□□□□□ -1.77
CALCA-204ENST00000469608 OBSCNQ5VST9 7968 aa3.98□□□□□ -1.77
CALCA-204ENST00000469608 MUC5ACP98088 5654 aa3.98□□□□□ -1.77
CALCA-204ENST00000469608 MUC5BQ9HC84 5762 aaPredicted RBP3.95□□□□□ -1.78
CALCA-204ENST00000469608 MT3P25713 68 aa3.91□□□□□ -1.78
CALCA-204ENST00000469608 KRTAP5-1Q6L8H4 278 aa3.8□□□□□ -1.8
CALCA-204ENST00000469608 SVIPQ8NHG7 77 aa3.75□□□□□ -1.81
CALCA-204ENST00000469608 BRK1Q8WUW1 75 aa3.65□□□□□ -1.83
CALCA-204ENST00000469608 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
CALCA-204ENST00000469608 LCE1BQ5T7P3 118 aa3.46□□□□□ -1.86
CALCA-204ENST00000469608 PMAIP1Q13794 54 aa3.39□□□□□ -1.87
CALCA-204ENST00000469608 PRAC1Q96KF2 57 aa3.36□□□□□ -1.87
CALCA-204ENST00000469608 LCE1CQ5T751 118 aa3.34□□□□□ -1.87
CALCA-204ENST00000469608 PRO0628Q9UI54 55 aa3.24□□□□□ -1.89
CALCA-204ENST00000469608 LCE3DQ9BYE3 92 aa3.17□□□□□ -1.9
CALCA-204ENST00000469608 A0A0A0MQY5 61 aa3.1□□□□□ -1.91
CALCA-204ENST00000469608 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
CALCA-204ENST00000469608 KTN1-AS1Q86SY8 53 aa3.03□□□□□ -1.92
CALCA-204ENST00000469608 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
CALCA-204ENST00000469608 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
CALCA-204ENST00000469608 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
CALCA-204ENST00000469608 LUZP6Q538Z0 58 aa2.82□□□□□ -1.96
CALCA-204ENST00000469608 KRTAP21-2Q3LI59 83 aa2.8□□□□□ -1.96
CALCA-204ENST00000469608 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
CALCA-204ENST00000469608 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
CALCA-204ENST00000469608 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
CALCA-204ENST00000469608 NDUFAF8A1L188 74 aa2.46□□□□□ -2.02
CALCA-204ENST00000469608 PRM1P04553 51 aa2.2□□□□□ -2.06
CALCA-204ENST00000469608 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
CALCA-204ENST00000469608 INE1O15225 51 aa1.93□□□□□ -2.1
CALCA-204ENST00000469608 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 46.6 ms