RNA–Protein interactions for RNA: ENST00000469569.1

FN1-216, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 629 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-216ENST00000469569 KRTAP12-1P59990 96 aa3.62□□□□□ -1.83
FN1-216ENST00000469569 SPRR2FQ96RM1 72 aa3.61□□□□□ -1.83
FN1-216ENST00000469569 KMT2DO14686 5537 aa3.6□□□□□ -1.83
FN1-216ENST00000469569 MUC12Q9UKN1 5478 aa3.58□□□□□ -1.84
FN1-216ENST00000469569 A8MU10 97 aa3.55□□□□□ -1.84
FN1-216ENST00000469569 Q1T7F1 81 aa3.55□□□□□ -1.84
FN1-216ENST00000469569 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
FN1-216ENST00000469569 NEBP20929 6669 aa3.54□□□□□ -1.84
FN1-216ENST00000469569 SPRR2EP22531 72 aa3.53□□□□□ -1.84
FN1-216ENST00000469569 SPRR2BP35325 72 aa3.53□□□□□ -1.84
FN1-216ENST00000469569 SPRR2AP35326 72 aa3.53□□□□□ -1.84
FN1-216ENST00000469569 K7ERS5 55 aa3.52□□□□□ -1.85
FN1-216ENST00000469569 RPS28P62857 69 aaKnown RBP3.51□□□□□ -1.85
FN1-216ENST00000469569 MIR22HGQ0VDD5 57 aa3.51□□□□□ -1.85
FN1-216ENST00000469569 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
FN1-216ENST00000469569 TNP1P09430 55 aa3.49□□□□□ -1.85
FN1-216ENST00000469569 KRTAP20-1Q3LI63 56 aa3.49□□□□□ -1.85
FN1-216ENST00000469569 PSPHP1O15172 72 aa3.47□□□□□ -1.85
FN1-216ENST00000469569 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
FN1-216ENST00000469569 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
FN1-216ENST00000469569 C10orf95Q9H7T3 257 aa3.43□□□□□ -1.86
FN1-216ENST00000469569 SPRR2DP22532 72 aa3.42□□□□□ -1.86
FN1-216ENST00000469569 A6NED7 52 aa3.41□□□□□ -1.86
FN1-216ENST00000469569 KRTAP19-7Q3SYF9 63 aa3.39□□□□□ -1.87
FN1-216ENST00000469569 KRTAP25-1Q3LHN0 102 aa3.38□□□□□ -1.87
FN1-216ENST00000469569 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
FN1-216ENST00000469569 MT1EP04732 61 aa3.37□□□□□ -1.87
FN1-216ENST00000469569 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
FN1-216ENST00000469569 KRTAP2-1Q9BYU5 128 aa3.35□□□□□ -1.87
FN1-216ENST00000469569 KRTAP19-5Q3LI72 72 aa3.34□□□□□ -1.87
FN1-216ENST00000469569 KRTAP19-3Q7Z4W3 81 aa3.34□□□□□ -1.87
FN1-216ENST00000469569 LCE3AQ5TA76 89 aa3.33□□□□□ -1.88
FN1-216ENST00000469569 PP632Q6XCG6 107 aa3.33□□□□□ -1.88
FN1-216ENST00000469569 MT1GP13640 62 aa3.31□□□□□ -1.88
FN1-216ENST00000469569 CDC42SE1Q9NRR8 79 aa3.29□□□□□ -1.88
FN1-216ENST00000469569 KRTAP12-3P60328 96 aa3.25□□□□□ -1.89
FN1-216ENST00000469569 KRTAP5-4Q6L8H1 288 aa3.25□□□□□ -1.89
FN1-216ENST00000469569 MT1LQ93083 61 aa3.25□□□□□ -1.89
FN1-216ENST00000469569 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
FN1-216ENST00000469569 ROMO1P60602 79 aa3.22□□□□□ -1.89
FN1-216ENST00000469569 MT1MQ8N339 61 aa3.2□□□□□ -1.9
FN1-216ENST00000469569 DSTQ03001 7570 aaKnown RBP3.15□□□□□ -1.91
FN1-216ENST00000469569 BRK1Q8WUW1 75 aa3.05□□□□□ -1.92
FN1-216ENST00000469569 KRTAP4-3Q9BYR4 195 aa3.04□□□□□ -1.92
FN1-216ENST00000469569 MT4P47944 62 aa2.94□□□□□ -1.94
FN1-216ENST00000469569 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
FN1-216ENST00000469569 HMCN1Q96RW7 5635 aa2.92□□□□□ -1.94
FN1-216ENST00000469569 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
FN1-216ENST00000469569 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
FN1-216ENST00000469569 KRTAP12-4P60329 112 aa2.9□□□□□ -1.95
FN1-216ENST00000469569 PMAIP1Q13794 54 aa2.9□□□□□ -1.95
FN1-216ENST00000469569 SPRR5A0A1B0GTR4 108 aa2.87□□□□□ -1.95
FN1-216ENST00000469569 KRTAP20-2Q3LI61 65 aa2.8□□□□□ -1.96
FN1-216ENST00000469569 PRO0628Q9UI54 55 aa2.8□□□□□ -1.96
FN1-216ENST00000469569 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
FN1-216ENST00000469569 MT1AP04731 61 aa2.78□□□□□ -1.96
FN1-216ENST00000469569 AHNAK2Q8IVF2 5795 aa2.75□□□□□ -1.97
FN1-216ENST00000469569 KRTAP6-1Q3LI64 71 aa2.71□□□□□ -1.98
FN1-216ENST00000469569 KRTAP5-2Q701N4 177 aa2.7□□□□□ -1.98
FN1-216ENST00000469569 KRTAP5-10Q6L8G5 202 aa2.69□□□□□ -1.98
FN1-216ENST00000469569 SYNE1Q8NF91 8797 aaKnown RBP2.67□□□□□ -1.98
FN1-216ENST00000469569 KTN1-AS1Q86SY8 53 aa2.64□□□□□ -1.99
FN1-216ENST00000469569 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
FN1-216ENST00000469569 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
FN1-216ENST00000469569 LCE1CQ5T751 118 aa2.57□□□□□ -2
FN1-216ENST00000469569 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
FN1-216ENST00000469569 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
FN1-216ENST00000469569 LUZP6Q538Z0 58 aa2.4□□□□□ -2.03
FN1-216ENST00000469569 MUC5ACP98088 5654 aa2.29□□□□□ -2.04
FN1-216ENST00000469569 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
FN1-216ENST00000469569 AHNAKQ09666 5890 aaKnown RBP2.25□□□□□ -2.05
FN1-216ENST00000469569 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
FN1-216ENST00000469569 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
FN1-216ENST00000469569 INE1O15225 51 aa1.68□□□□□ -2.14
FN1-216ENST00000469569 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
FN1-216ENST00000469569 PRM1P04553 51 aa1.61□□□□□ -2.15
FN1-216ENST00000469569 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
FN1-216ENST00000469569 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms