RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 KRTAP19-3Q7Z4W3 81 aa8.3□□□□□ -1.08
SREBF1-208ENST00000469356 SPRR2DP22532 72 aa8.28□□□□□ -1.08
SREBF1-208ENST00000469356 PMAIP1Q13794 54 aa8.26□□□□□ -1.09
SREBF1-208ENST00000469356 MT1GP13640 62 aa8.22□□□□□ -1.09
SREBF1-208ENST00000469356 LCE5AQ5TCM9 118 aa8.21□□□□□ -1.1
SREBF1-208ENST00000469356 MT1LQ93083 61 aa8.19□□□□□ -1.1
SREBF1-208ENST00000469356 KRTAP20-1Q3LI63 56 aa8.18□□□□□ -1.1
SREBF1-208ENST00000469356 PRO0628Q9UI54 55 aa8.16□□□□□ -1.1
SREBF1-208ENST00000469356 KRTAP2-3P0C7H8 128 aa8.15□□□□□ -1.1
SREBF1-208ENST00000469356 KRTAP2-4Q9BYR9 128 aa8.15□□□□□ -1.1
SREBF1-208ENST00000469356 KRTAP19-4Q3LI73 84 aa8.05□□□□□ -1.12
SREBF1-208ENST00000469356 KRTAP15-1Q3LI76 137 aa8.03□□□□□ -1.12
SREBF1-208ENST00000469356 MT1MQ8N339 61 aa8.02□□□□□ -1.13
SREBF1-208ENST00000469356 LCE3BQ5TA77 95 aa8□□□□□ -1.13
SREBF1-208ENST00000469356 SVIPQ8NHG7 77 aa7.95□□□□□ -1.14
SREBF1-208ENST00000469356 KRTAP2-2Q9BYT5 123 aa7.93□□□□□ -1.14
SREBF1-208ENST00000469356 KRTAP2-1Q9BYU5 128 aa7.93□□□□□ -1.14
SREBF1-208ENST00000469356 KRTAP4-7Q9BYR0 210 aa7.75□□□□□ -1.17
SREBF1-208ENST00000469356 DSTQ03001 7570 aaKnown RBP7.74□□□□□ -1.17
SREBF1-208ENST00000469356 LCE3CQ5T5A8 94 aa7.74□□□□□ -1.17
SREBF1-208ENST00000469356 KRTAP4-3Q9BYR4 195 aa7.73□□□□□ -1.17
SREBF1-208ENST00000469356 PRAC1Q96KF2 57 aa7.68□□□□□ -1.18
SREBF1-208ENST00000469356 KTN1-AS1Q86SY8 53 aa7.66□□□□□ -1.18
SREBF1-208ENST00000469356 LCE4AQ5TA78 99 aa7.4□□□□□ -1.22
SREBF1-208ENST00000469356 LOC100996750A0A140TA64 210 aa7.31□□□□□ -1.24
SREBF1-208ENST00000469356 KRTAP5-4Q6L8H1 288 aa7.27□□□□□ -1.24
SREBF1-208ENST00000469356 KRTAP5-5Q701N2 237 aaPredicted RBP7.26□□□□□ -1.25
SREBF1-208ENST00000469356 KRTAP4-9Q9BYQ8 210 aa7.21□□□□□ -1.26
SREBF1-208ENST00000469356 KRTAP9-6A8MVA2 160 aa7.16□□□□□ -1.26
SREBF1-208ENST00000469356 MT4P47944 62 aa7.15□□□□□ -1.26
SREBF1-208ENST00000469356 LCE1DQ5T752 114 aa7.14□□□□□ -1.27
SREBF1-208ENST00000469356 KRTAP12-4P60329 112 aa7.05□□□□□ -1.28
SREBF1-208ENST00000469356 MT1AP04731 61 aa7.01□□□□□ -1.29
SREBF1-208ENST00000469356 SPRR5A0A1B0GTR4 108 aa6.98□□□□□ -1.29
SREBF1-208ENST00000469356 KRTAP4-6Q9BYQ5 205 aa6.98□□□□□ -1.29
SREBF1-208ENST00000469356 HMCN1Q96RW7 5635 aa6.94□□□□□ -1.3
SREBF1-208ENST00000469356 KRTAP6-1Q3LI64 71 aa6.87□□□□□ -1.31
SREBF1-208ENST00000469356 SYNE1Q8NF91 8797 aaKnown RBP6.85□□□□□ -1.31
SREBF1-208ENST00000469356 KRTAP20-2Q3LI61 65 aa6.84□□□□□ -1.31
SREBF1-208ENST00000469356 KRTAP9-4Q9BYQ2 154 aa6.71□□□□□ -1.34
SREBF1-208ENST00000469356 LUZP6Q538Z0 58 aa6.59□□□□□ -1.35
SREBF1-208ENST00000469356 KRTAP5-3Q6L8H2 238 aa6.59□□□□□ -1.35
SREBF1-208ENST00000469356 AHNAK2Q8IVF2 5795 aa6.5□□□□□ -1.37
SREBF1-208ENST00000469356 KRTAP5-2Q701N4 177 aa6.48□□□□□ -1.37
SREBF1-208ENST00000469356 KRTAP6-2Q3LI66 62 aa6.47□□□□□ -1.37
SREBF1-208ENST00000469356 MT3P25713 68 aa6.44□□□□□ -1.38
SREBF1-208ENST00000469356 GPR98Q8WXG9 6306 aa6.37□□□□□ -1.39
SREBF1-208ENST00000469356 KRTAP5-10Q6L8G5 202 aa6.3□□□□□ -1.4
SREBF1-208ENST00000469356 KRTAP4-11Q9BYQ6 195 aa6.11□□□□□ -1.43
SREBF1-208ENST00000469356 KRTAP5-7Q6L8G8 165 aa6.01□□□□□ -1.45
SREBF1-208ENST00000469356 KRTAP5-8O75690 187 aa5.86□□□□□ -1.47
SREBF1-208ENST00000469356 OBSCNQ5VST9 7968 aa5.85□□□□□ -1.47
SREBF1-208ENST00000469356 NDUFAF8A1L188 74 aa5.78□□□□□ -1.48
SREBF1-208ENST00000469356 LCE1EQ5T753 118 aa5.74□□□□□ -1.49
SREBF1-208ENST00000469356 LCE3DQ9BYE3 92 aa5.74□□□□□ -1.49
SREBF1-208ENST00000469356 KRTAP5-1Q6L8H4 278 aa5.68□□□□□ -1.5
SREBF1-208ENST00000469356 H3BS24 57 aa5.6□□□□□ -1.51
SREBF1-208ENST00000469356 KRTAP9-9Q9BYP9 154 aa5.54□□□□□ -1.52
SREBF1-208ENST00000469356 MUC5ACP98088 5654 aa5.53□□□□□ -1.52
SREBF1-208ENST00000469356 LCE3EQ5T5B0 92 aa5.5□□□□□ -1.53
SREBF1-208ENST00000469356 LCE1BQ5T7P3 118 aa5.34□□□□□ -1.55
SREBF1-208ENST00000469356 LCE1CQ5T751 118 aa5.31□□□□□ -1.56
SREBF1-208ENST00000469356 KRTAP4-2Q9BYR5 136 aa5.28□□□□□ -1.56
SREBF1-208ENST00000469356 MUC5BQ9HC84 5762 aaPredicted RBP5.27□□□□□ -1.57
SREBF1-208ENST00000469356 AHNAKQ09666 5890 aaKnown RBP5.17□□□□□ -1.58
SREBF1-208ENST00000469356 A0A0A0MQY5 61 aa5.03□□□□□ -1.6
SREBF1-208ENST00000469356 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.9□□□□□ -1.63
SREBF1-208ENST00000469356 INE1O15225 51 aa4.85□□□□□ -1.63
SREBF1-208ENST00000469356 KRTAP5-11Q6L8G4 156 aa4.75□□□□□ -1.65
SREBF1-208ENST00000469356 KRTAP4-12Q9BQ66 201 aa4.57□□□□□ -1.68
SREBF1-208ENST00000469356 LCE1FQ5T754 118 aa4.53□□□□□ -1.68
SREBF1-208ENST00000469356 KRTAP21-2Q3LI59 83 aa4.51□□□□□ -1.69
SREBF1-208ENST00000469356 PRM1P04553 51 aa4.43□□□□□ -1.7
SREBF1-208ENST00000469356 PHGR1C9JFL3 82 aa4.06□□□□□ -1.76
SREBF1-208ENST00000469356 KRTAP4-4Q9BYR3 166 aa4.02□□□□□ -1.77
SREBF1-208ENST00000469356 MUC19Q7Z5P9 8384 aa3.57□□□□□ -1.84
SREBF1-208ENST00000469356 KRTAP21-1Q3LI58 79 aa2.82□□□□□ -1.96
SREBF1-208ENST00000469356 MUC16Q8WXI7 14507 aa2.58□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms