RNA–Protein interactions for RNA: ENST00000469217.5

PCCB-209, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PCCB, Length 1,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-209ENST00000469217 KRTAP12-3P60328 96 aa6.36□□□□□ -1.39
PCCB-209ENST00000469217 LCE1AQ5T7P2 110 aa6.32□□□□□ -1.4
PCCB-209ENST00000469217 SPRR2EP22531 72 aa6.31□□□□□ -1.4
PCCB-209ENST00000469217 SPRR2BP35325 72 aa6.31□□□□□ -1.4
PCCB-209ENST00000469217 SPRR2AP35326 72 aa6.31□□□□□ -1.4
PCCB-209ENST00000469217 NEBP20929 6669 aa6.31□□□□□ -1.4
PCCB-209ENST00000469217 KRTAP19-3Q7Z4W3 81 aa6.23□□□□□ -1.41
PCCB-209ENST00000469217 MT1LQ93083 61 aa6.22□□□□□ -1.41
PCCB-209ENST00000469217 LCE5AQ5TCM9 118 aa6.18□□□□□ -1.42
PCCB-209ENST00000469217 NDUFAF8A1L188 74 aa6.16□□□□□ -1.42
PCCB-209ENST00000469217 MT1GP13640 62 aa6.14□□□□□ -1.43
PCCB-209ENST00000469217 SPRR2DP22532 72 aa6.09□□□□□ -1.44
PCCB-209ENST00000469217 SPRR5A0A1B0GTR4 108 aa6.08□□□□□ -1.44
PCCB-209ENST00000469217 MT1MQ8N339 61 aa6.05□□□□□ -1.44
PCCB-209ENST00000469217 KRTAP20-1Q3LI63 56 aa6□□□□□ -1.45
PCCB-209ENST00000469217 LUZP6Q538Z0 58 aa5.99□□□□□ -1.45
PCCB-209ENST00000469217 KRTAP4-7Q9BYR0 210 aa5.99□□□□□ -1.45
PCCB-209ENST00000469217 DSTQ03001 7570 aaKnown RBP5.97□□□□□ -1.45
PCCB-209ENST00000469217 KRTAP19-4Q3LI73 84 aa5.97□□□□□ -1.45
PCCB-209ENST00000469217 KRTAP4-3Q9BYR4 195 aa5.93□□□□□ -1.46
PCCB-209ENST00000469217 LCE3CQ5T5A8 94 aa5.91□□□□□ -1.46
PCCB-209ENST00000469217 KRTAP2-3P0C7H8 128 aa5.89□□□□□ -1.47
PCCB-209ENST00000469217 KRTAP2-4Q9BYR9 128 aa5.89□□□□□ -1.47
PCCB-209ENST00000469217 LCE3BQ5TA77 95 aa5.88□□□□□ -1.47
PCCB-209ENST00000469217 A0A0A0MQY5 61 aa5.83□□□□□ -1.48
PCCB-209ENST00000469217 KRTAP2-2Q9BYT5 123 aa5.75□□□□□ -1.49
PCCB-209ENST00000469217 KRTAP2-1Q9BYU5 128 aa5.75□□□□□ -1.49
PCCB-209ENST00000469217 LOC100996750A0A140TA64 210 aa5.64□□□□□ -1.51
PCCB-209ENST00000469217 KRTAP9-6A8MVA2 160 aa5.6□□□□□ -1.51
PCCB-209ENST00000469217 KRTAP4-6Q9BYQ5 205 aa5.56□□□□□ -1.52
PCCB-209ENST00000469217 KRTAP5-5Q701N2 237 aaPredicted RBP5.5□□□□□ -1.53
PCCB-209ENST00000469217 KRTAP5-4Q6L8H1 288 aa5.43□□□□□ -1.54
PCCB-209ENST00000469217 LCE4AQ5TA78 99 aa5.39□□□□□ -1.55
PCCB-209ENST00000469217 KRTAP4-9Q9BYQ8 210 aa5.36□□□□□ -1.55
PCCB-209ENST00000469217 MT4P47944 62 aa5.31□□□□□ -1.56
PCCB-209ENST00000469217 SYNE1Q8NF91 8797 aaKnown RBP5.29□□□□□ -1.56
PCCB-209ENST00000469217 MT1AP04731 61 aa5.28□□□□□ -1.56
PCCB-209ENST00000469217 LCE1DQ5T752 114 aa5.28□□□□□ -1.56
PCCB-209ENST00000469217 KRTAP6-1Q3LI64 71 aa5.25□□□□□ -1.57
PCCB-209ENST00000469217 INE1O15225 51 aa5.2□□□□□ -1.58
PCCB-209ENST00000469217 KRTAP12-4P60329 112 aa5.19□□□□□ -1.58
PCCB-209ENST00000469217 HMCN1Q96RW7 5635 aa5.17□□□□□ -1.58
PCCB-209ENST00000469217 KRTAP20-2Q3LI61 65 aa5.09□□□□□ -1.59
PCCB-209ENST00000469217 KRTAP9-4Q9BYQ2 154 aa5.05□□□□□ -1.6
PCCB-209ENST00000469217 KRTAP5-3Q6L8H2 238 aa4.93□□□□□ -1.62
PCCB-209ENST00000469217 GPR98Q8WXG9 6306 aa4.92□□□□□ -1.62
PCCB-209ENST00000469217 KRTAP6-2Q3LI66 62 aa4.9□□□□□ -1.63
PCCB-209ENST00000469217 KRTAP5-2Q701N4 177 aa4.86□□□□□ -1.63
PCCB-209ENST00000469217 MT3P25713 68 aa4.8□□□□□ -1.64
PCCB-209ENST00000469217 AHNAK2Q8IVF2 5795 aa4.77□□□□□ -1.65
PCCB-209ENST00000469217 KRTAP4-12Q9BQ66 201 aa4.68□□□□□ -1.66
PCCB-209ENST00000469217 KRTAP5-10Q6L8G5 202 aa4.65□□□□□ -1.66
PCCB-209ENST00000469217 OBSCNQ5VST9 7968 aa4.65□□□□□ -1.67
PCCB-209ENST00000469217 KRTAP9-9Q9BYP9 154 aa4.64□□□□□ -1.67
PCCB-209ENST00000469217 KRTAP4-11Q9BYQ6 195 aa4.51□□□□□ -1.69
PCCB-209ENST00000469217 KRTAP5-7Q6L8G8 165 aa4.47□□□□□ -1.69
PCCB-209ENST00000469217 LCE3DQ9BYE3 92 aa4.37□□□□□ -1.71
PCCB-209ENST00000469217 KRTAP5-8O75690 187 aa4.35□□□□□ -1.71
PCCB-209ENST00000469217 KRTAP4-2Q9BYR5 136 aa4.3□□□□□ -1.72
PCCB-209ENST00000469217 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
PCCB-209ENST00000469217 KRTAP5-1Q6L8H4 278 aa4.26□□□□□ -1.73
PCCB-209ENST00000469217 LCE3EQ5T5B0 92 aa4.25□□□□□ -1.73
PCCB-209ENST00000469217 MUC5ACP98088 5654 aa4.08□□□□□ -1.76
PCCB-209ENST00000469217 LCE1BQ5T7P3 118 aa4□□□□□ -1.77
PCCB-209ENST00000469217 LCE1CQ5T751 118 aa3.97□□□□□ -1.77
PCCB-209ENST00000469217 MUC5BQ9HC84 5762 aaPredicted RBP3.92□□□□□ -1.78
PCCB-209ENST00000469217 AHNAKQ09666 5890 aaKnown RBP3.89□□□□□ -1.79
PCCB-209ENST00000469217 PRM1P04553 51 aa3.88□□□□□ -1.79
PCCB-209ENST00000469217 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
PCCB-209ENST00000469217 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
PCCB-209ENST00000469217 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
PCCB-209ENST00000469217 KRTAP21-2Q3LI59 83 aa3.45□□□□□ -1.86
PCCB-209ENST00000469217 KRTAP4-4Q9BYR3 166 aa3.09□□□□□ -1.92
PCCB-209ENST00000469217 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
PCCB-209ENST00000469217 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
PCCB-209ENST00000469217 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
PCCB-209ENST00000469217 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 86.1 ms