RNA–Protein interactions for RNA: ENST00000469140.2

MTA1-209, Transcript of metastasis associated 1, humanhuman

TSL 5

Gene MTA1, Length 1,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-209ENST00000469140 MT1LQ93083 61 aa8.41□□□□□ -1.06
MTA1-209ENST00000469140 KRTAP19-4Q3LI73 84 aa8.35□□□□□ -1.07
MTA1-209ENST00000469140 KRTAP19-3Q7Z4W3 81 aa8.34□□□□□ -1.08
MTA1-209ENST00000469140 MUC12Q9UKN1 5478 aa8.33□□□□□ -1.08
MTA1-209ENST00000469140 MT1GP13640 62 aa8.27□□□□□ -1.09
MTA1-209ENST00000469140 LCE1AQ5T7P2 110 aa8.26□□□□□ -1.09
MTA1-209ENST00000469140 SPRR2EP22531 72 aa8.21□□□□□ -1.09
MTA1-209ENST00000469140 SPRR2BP35325 72 aa8.21□□□□□ -1.09
MTA1-209ENST00000469140 SPRR2AP35326 72 aa8.21□□□□□ -1.09
MTA1-209ENST00000469140 LCE5AQ5TCM9 118 aa8.21□□□□□ -1.09
MTA1-209ENST00000469140 LCE3CQ5T5A8 94 aa8.2□□□□□ -1.1
MTA1-209ENST00000469140 NDUFAF8A1L188 74 aa8.16□□□□□ -1.1
MTA1-209ENST00000469140 MDN1Q9NU22 5596 aa8.13□□□□□ -1.11
MTA1-209ENST00000469140 MT1MQ8N339 61 aa8.12□□□□□ -1.11
MTA1-209ENST00000469140 KRTAP4-7Q9BYR0 210 aa8.07□□□□□ -1.12
MTA1-209ENST00000469140 SPRR5A0A1B0GTR4 108 aa7.98□□□□□ -1.13
MTA1-209ENST00000469140 LUZP6Q538Z0 58 aa7.95□□□□□ -1.14
MTA1-209ENST00000469140 SPRR2DP22532 72 aa7.92□□□□□ -1.14
MTA1-209ENST00000469140 KRTAP4-3Q9BYR4 195 aa7.91□□□□□ -1.14
MTA1-209ENST00000469140 NEBP20929 6669 aa7.85□□□□□ -1.15
MTA1-209ENST00000469140 KRTAP9-6A8MVA2 160 aa7.7□□□□□ -1.18
MTA1-209ENST00000469140 A0A0A0MQY5 61 aa7.67□□□□□ -1.18
MTA1-209ENST00000469140 LCE3BQ5TA77 95 aa7.63□□□□□ -1.19
MTA1-209ENST00000469140 DSTQ03001 7570 aaKnown RBP7.61□□□□□ -1.19
MTA1-209ENST00000469140 LOC100996750A0A140TA64 210 aa7.59□□□□□ -1.19
MTA1-209ENST00000469140 KRTAP2-3P0C7H8 128 aa7.52□□□□□ -1.21
MTA1-209ENST00000469140 KRTAP2-4Q9BYR9 128 aa7.52□□□□□ -1.21
MTA1-209ENST00000469140 KRTAP20-1Q3LI63 56 aa7.43□□□□□ -1.22
MTA1-209ENST00000469140 KRTAP5-5Q701N2 237 aaPredicted RBP7.35□□□□□ -1.23
MTA1-209ENST00000469140 KRTAP2-2Q9BYT5 123 aa7.35□□□□□ -1.23
MTA1-209ENST00000469140 KRTAP2-1Q9BYU5 128 aa7.35□□□□□ -1.23
MTA1-209ENST00000469140 MT1AP04731 61 aa7.16□□□□□ -1.26
MTA1-209ENST00000469140 KRTAP5-4Q6L8H1 288 aa7.14□□□□□ -1.27
MTA1-209ENST00000469140 KRTAP6-1Q3LI64 71 aa7.07□□□□□ -1.28
MTA1-209ENST00000469140 LCE4AQ5TA78 99 aa7.07□□□□□ -1.28
MTA1-209ENST00000469140 KRTAP12-4P60329 112 aa6.91□□□□□ -1.3
MTA1-209ENST00000469140 INE1O15225 51 aa6.89□□□□□ -1.31
MTA1-209ENST00000469140 MT4P47944 62 aa6.86□□□□□ -1.31
MTA1-209ENST00000469140 SYNE1Q8NF91 8797 aaKnown RBP6.83□□□□□ -1.32
MTA1-209ENST00000469140 KRTAP9-4Q9BYQ2 154 aa6.83□□□□□ -1.32
MTA1-209ENST00000469140 KRTAP4-9Q9BYQ8 210 aa6.83□□□□□ -1.32
MTA1-209ENST00000469140 LCE1DQ5T752 114 aa6.8□□□□□ -1.32
MTA1-209ENST00000469140 KRTAP4-6Q9BYQ5 205 aa6.79□□□□□ -1.32
MTA1-209ENST00000469140 KRTAP20-2Q3LI61 65 aa6.67□□□□□ -1.34
MTA1-209ENST00000469140 HMCN1Q96RW7 5635 aa6.61□□□□□ -1.35
MTA1-209ENST00000469140 GPR98Q8WXG9 6306 aa6.57□□□□□ -1.36
MTA1-209ENST00000469140 KRTAP6-2Q3LI66 62 aa6.55□□□□□ -1.36
MTA1-209ENST00000469140 MT3P25713 68 aa6.52□□□□□ -1.37
MTA1-209ENST00000469140 KRTAP5-3Q6L8H2 238 aa6.43□□□□□ -1.38
MTA1-209ENST00000469140 KRTAP5-2Q701N4 177 aa6.43□□□□□ -1.38
MTA1-209ENST00000469140 LCE3DQ9BYE3 92 aa6.13□□□□□ -1.43
MTA1-209ENST00000469140 LCE3EQ5T5B0 92 aa5.94□□□□□ -1.46
MTA1-209ENST00000469140 AHNAK2Q8IVF2 5795 aa5.93□□□□□ -1.46
MTA1-209ENST00000469140 KRTAP4-11Q9BYQ6 195 aa5.84□□□□□ -1.47
MTA1-209ENST00000469140 OBSCNQ5VST9 7968 aa5.83□□□□□ -1.48
MTA1-209ENST00000469140 KRTAP5-10Q6L8G5 202 aa5.78□□□□□ -1.48
MTA1-209ENST00000469140 LCE1EQ5T753 118 aa5.73□□□□□ -1.49
MTA1-209ENST00000469140 KRTAP5-8O75690 187 aa5.61□□□□□ -1.51
MTA1-209ENST00000469140 KRTAP5-1Q6L8H4 278 aa5.59□□□□□ -1.52
MTA1-209ENST00000469140 KRTAP5-7Q6L8G8 165 aa5.57□□□□□ -1.52
MTA1-209ENST00000469140 LCE1CQ5T751 118 aa5.32□□□□□ -1.56
MTA1-209ENST00000469140 LCE1BQ5T7P3 118 aa5.32□□□□□ -1.56
MTA1-209ENST00000469140 KRTAP4-2Q9BYR5 136 aa5.31□□□□□ -1.56
MTA1-209ENST00000469140 MUC5ACP98088 5654 aa5.29□□□□□ -1.56
MTA1-209ENST00000469140 KRTAP9-9Q9BYP9 154 aa5.13□□□□□ -1.59
MTA1-209ENST00000469140 AHNAKQ09666 5890 aaKnown RBP5.05□□□□□ -1.6
MTA1-209ENST00000469140 PRM1P04553 51 aa5.05□□□□□ -1.6
MTA1-209ENST00000469140 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.96□□□□□ -1.61
MTA1-209ENST00000469140 MUC5BQ9HC84 5762 aaPredicted RBP4.88□□□□□ -1.63
MTA1-209ENST00000469140 KRTAP5-11Q6L8G4 156 aa4.71□□□□□ -1.66
MTA1-209ENST00000469140 KRTAP21-2Q3LI59 83 aa4.64□□□□□ -1.67
MTA1-209ENST00000469140 KRTAP4-12Q9BQ66 201 aa4.44□□□□□ -1.7
MTA1-209ENST00000469140 LCE1FQ5T754 118 aa4.34□□□□□ -1.71
MTA1-209ENST00000469140 KRTAP4-4Q9BYR3 166 aa4.1□□□□□ -1.75
MTA1-209ENST00000469140 PHGR1C9JFL3 82 aa4.04□□□□□ -1.76
MTA1-209ENST00000469140 MUC19Q7Z5P9 8384 aa3.49□□□□□ -1.85
MTA1-209ENST00000469140 KRTAP21-1Q3LI58 79 aa3.12□□□□□ -1.91
MTA1-209ENST00000469140 MUC16Q8WXI7 14507 aa2.56□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms