RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 LCE3AQ5TA76 89 aa5.16□□□□□ -1.58
SDCCAG3-209ENST00000468963 A0A1B0GU69 56 aa5.15□□□□□ -1.59
SDCCAG3-209ENST00000468963 KRTAP5-4Q6L8H1 288 aa5.15□□□□□ -1.59
SDCCAG3-209ENST00000468963 C10orf95Q9H7T3 257 aa5.15□□□□□ -1.59
SDCCAG3-209ENST00000468963 TNP1P09430 55 aa5.12□□□□□ -1.59
SDCCAG3-209ENST00000468963 KRTAP4-6Q9BYQ5 205 aa5.07□□□□□ -1.6
SDCCAG3-209ENST00000468963 KRTAP5-10Q6L8G5 202 aa5.01□□□□□ -1.61
SDCCAG3-209ENST00000468963 PCP4P48539 62 aa5□□□□□ -1.61
SDCCAG3-209ENST00000468963 KRTAP4-7Q9BYR0 210 aa5□□□□□ -1.61
SDCCAG3-209ENST00000468963 KRTAP12-3P60328 96 aa4.97□□□□□ -1.61
SDCCAG3-209ENST00000468963 PRR15LQ9BU68 103 aa4.96□□□□□ -1.62
SDCCAG3-209ENST00000468963 LINC01558Q9Y6Z2 57 aa4.94□□□□□ -1.62
SDCCAG3-209ENST00000468963 V9GYY9 64 aa4.89□□□□□ -1.63
SDCCAG3-209ENST00000468963 RPS28P62857 69 aaKnown RBP4.87□□□□□ -1.63
SDCCAG3-209ENST00000468963 KRTAP5-5Q701N2 237 aaPredicted RBP4.87□□□□□ -1.63
SDCCAG3-209ENST00000468963 KRTAP20-2Q3LI61 65 aa4.85□□□□□ -1.63
SDCCAG3-209ENST00000468963 KRTAP5-3Q6L8H2 238 aa4.85□□□□□ -1.63
SDCCAG3-209ENST00000468963 KRTAP5-7Q6L8G8 165 aa4.84□□□□□ -1.63
SDCCAG3-209ENST00000468963 SYNE1Q8NF91 8797 aaKnown RBP4.83□□□□□ -1.64
SDCCAG3-209ENST00000468963 SPRR5A0A1B0GTR4 108 aa4.81□□□□□ -1.64
SDCCAG3-209ENST00000468963 Q1T7F1 81 aa4.81□□□□□ -1.64
SDCCAG3-209ENST00000468963 UQCR11O14957 56 aa4.79□□□□□ -1.64
SDCCAG3-209ENST00000468963 LOC100996750A0A140TA64 210 aa4.75□□□□□ -1.65
SDCCAG3-209ENST00000468963 KRTAP12-4P60329 112 aa4.75□□□□□ -1.65
SDCCAG3-209ENST00000468963 KRTAP25-1Q3LHN0 102 aa4.75□□□□□ -1.65
SDCCAG3-209ENST00000468963 KRTAP19-4Q3LI73 84 aa4.7□□□□□ -1.66
SDCCAG3-209ENST00000468963 MIR22HGQ0VDD5 57 aa4.69□□□□□ -1.66
SDCCAG3-209ENST00000468963 PSPHP1O15172 72 aa4.68□□□□□ -1.66
SDCCAG3-209ENST00000468963 KRTAP23-1A1A580 65 aa4.6□□□□□ -1.67
SDCCAG3-209ENST00000468963 KRTAP15-1Q3LI76 137 aa4.59□□□□□ -1.67
SDCCAG3-209ENST00000468963 K7ERS5 55 aa4.58□□□□□ -1.68
SDCCAG3-209ENST00000468963 A6NED7 52 aa4.57□□□□□ -1.68
SDCCAG3-209ENST00000468963 LCE3CQ5T5A8 94 aa4.57□□□□□ -1.68
SDCCAG3-209ENST00000468963 KRTAP5-2Q701N4 177 aa4.48□□□□□ -1.69
SDCCAG3-209ENST00000468963 KRTAP4-11Q9BYQ6 195 aa4.47□□□□□ -1.69
SDCCAG3-209ENST00000468963 CDC42SE1Q9NRR8 79 aa4.47□□□□□ -1.69
SDCCAG3-209ENST00000468963 MT1AP04731 61 aa4.46□□□□□ -1.7
SDCCAG3-209ENST00000468963 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.7
SDCCAG3-209ENST00000468963 KRTAP9-4Q9BYQ2 154 aa4.36□□□□□ -1.71
SDCCAG3-209ENST00000468963 AHNAKQ09666 5890 aaKnown RBP4.34□□□□□ -1.71
SDCCAG3-209ENST00000468963 KRTAP9-6A8MVA2 160 aa4.34□□□□□ -1.71
SDCCAG3-209ENST00000468963 KRTAP5-8O75690 187 aa4.33□□□□□ -1.72
SDCCAG3-209ENST00000468963 MUC5BQ9HC84 5762 aaPredicted RBP4.31□□□□□ -1.72
SDCCAG3-209ENST00000468963 OBSCNQ5VST9 7968 aa4.31□□□□□ -1.72
SDCCAG3-209ENST00000468963 ROMO1P60602 79 aa4.3□□□□□ -1.72
SDCCAG3-209ENST00000468963 KRTAP6-2Q3LI66 62 aa4.28□□□□□ -1.72
SDCCAG3-209ENST00000468963 MUC5ACP98088 5654 aa4.25□□□□□ -1.73
SDCCAG3-209ENST00000468963 BRK1Q8WUW1 75 aa4.22□□□□□ -1.73
SDCCAG3-209ENST00000468963 KRTAP9-9Q9BYP9 154 aa4.11□□□□□ -1.75
SDCCAG3-209ENST00000468963 MT3P25713 68 aa4.09□□□□□ -1.75
SDCCAG3-209ENST00000468963 KRTAP5-1Q6L8H4 278 aa4.05□□□□□ -1.76
SDCCAG3-209ENST00000468963 PMAIP1Q13794 54 aa4.02□□□□□ -1.77
SDCCAG3-209ENST00000468963 PRO0628Q9UI54 55 aa4.02□□□□□ -1.77
SDCCAG3-209ENST00000468963 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
SDCCAG3-209ENST00000468963 KTN1-AS1Q86SY8 53 aa3.76□□□□□ -1.81
SDCCAG3-209ENST00000468963 PRAC1Q96KF2 57 aa3.68□□□□□ -1.82
SDCCAG3-209ENST00000468963 KRTAP4-2Q9BYR5 136 aa3.62□□□□□ -1.83
SDCCAG3-209ENST00000468963 LCE1BQ5T7P3 118 aa3.57□□□□□ -1.84
SDCCAG3-209ENST00000468963 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
SDCCAG3-209ENST00000468963 SVIPQ8NHG7 77 aa3.49□□□□□ -1.85
SDCCAG3-209ENST00000468963 KRTAP4-12Q9BQ66 201 aa3.33□□□□□ -1.88
SDCCAG3-209ENST00000468963 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
SDCCAG3-209ENST00000468963 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
SDCCAG3-209ENST00000468963 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
SDCCAG3-209ENST00000468963 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.9
SDCCAG3-209ENST00000468963 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
SDCCAG3-209ENST00000468963 H3BS24 57 aa3.04□□□□□ -1.92
SDCCAG3-209ENST00000468963 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.92
SDCCAG3-209ENST00000468963 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
SDCCAG3-209ENST00000468963 PHGR1C9JFL3 82 aa2.89□□□□□ -1.95
SDCCAG3-209ENST00000468963 NDUFAF8A1L188 74 aa2.78□□□□□ -1.96
SDCCAG3-209ENST00000468963 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
SDCCAG3-209ENST00000468963 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
SDCCAG3-209ENST00000468963 A0A0A0MQY5 61 aa2.45□□□□□ -2.02
SDCCAG3-209ENST00000468963 INE1O15225 51 aa2.41□□□□□ -2.02
SDCCAG3-209ENST00000468963 PRM1P04553 51 aa2.22□□□□□ -2.05
SDCCAG3-209ENST00000468963 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
SDCCAG3-209ENST00000468963 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 10 ms