RNA–Protein interactions for RNA: ENST00000468358.5

CLDN11-202, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 593 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-202ENST00000468358 LCE5AQ5TCM9 118 aa6.33□□□□□ -1.4
CLDN11-202ENST00000468358 K7ERS5 55 aa6.28□□□□□ -1.4
CLDN11-202ENST00000468358 MT1GP13640 62 aa6.22□□□□□ -1.41
CLDN11-202ENST00000468358 PP632Q6XCG6 107 aa6.21□□□□□ -1.42
CLDN11-202ENST00000468358 A6NED7 52 aa6.2□□□□□ -1.42
CLDN11-202ENST00000468358 PRO0628Q9UI54 55 aa6.19□□□□□ -1.42
CLDN11-202ENST00000468358 BRK1Q8WUW1 75 aa6.18□□□□□ -1.42
CLDN11-202ENST00000468358 MT1LQ93083 61 aa6.17□□□□□ -1.42
CLDN11-202ENST00000468358 DSTQ03001 7570 aaKnown RBP6.15□□□□□ -1.42
CLDN11-202ENST00000468358 CDC42SE1Q9NRR8 79 aa6.15□□□□□ -1.42
CLDN11-202ENST00000468358 KRTAP25-1Q3LHN0 102 aa6.12□□□□□ -1.43
CLDN11-202ENST00000468358 MT1MQ8N339 61 aa6.12□□□□□ -1.43
CLDN11-202ENST00000468358 KRTAP12-3P60328 96 aa6.09□□□□□ -1.43
CLDN11-202ENST00000468358 KRTAP4-3Q9BYR4 195 aa5.99□□□□□ -1.45
CLDN11-202ENST00000468358 KRTAP4-9Q9BYQ8 210 aa5.94□□□□□ -1.46
CLDN11-202ENST00000468358 H3BS24 57 aa5.91□□□□□ -1.46
CLDN11-202ENST00000468358 KRTAP4-7Q9BYR0 210 aa5.9□□□□□ -1.46
CLDN11-202ENST00000468358 PMAIP1Q13794 54 aa5.89□□□□□ -1.47
CLDN11-202ENST00000468358 KRTAP23-1A1A580 65 aa5.84□□□□□ -1.47
CLDN11-202ENST00000468358 ROMO1P60602 79 aa5.83□□□□□ -1.48
CLDN11-202ENST00000468358 LCE4AQ5TA78 99 aa5.83□□□□□ -1.48
CLDN11-202ENST00000468358 MT4P47944 62 aa5.8□□□□□ -1.48
CLDN11-202ENST00000468358 LCE1DQ5T752 114 aa5.8□□□□□ -1.48
CLDN11-202ENST00000468358 KRTAP15-1Q3LI76 137 aa5.73□□□□□ -1.49
CLDN11-202ENST00000468358 KRTAP5-4Q6L8H1 288 aa5.7□□□□□ -1.5
CLDN11-202ENST00000468358 KTN1-AS1Q86SY8 53 aa5.7□□□□□ -1.5
CLDN11-202ENST00000468358 KRTAP19-4Q3LI73 84 aa5.69□□□□□ -1.5
CLDN11-202ENST00000468358 HMCN1Q96RW7 5635 aa5.64□□□□□ -1.51
CLDN11-202ENST00000468358 LCE3CQ5T5A8 94 aa5.6□□□□□ -1.51
CLDN11-202ENST00000468358 KRTAP4-6Q9BYQ5 205 aa5.6□□□□□ -1.51
CLDN11-202ENST00000468358 LOC100996750A0A140TA64 210 aa5.58□□□□□ -1.52
CLDN11-202ENST00000468358 KRTAP5-5Q701N2 237 aaPredicted RBP5.55□□□□□ -1.52
CLDN11-202ENST00000468358 GPR98Q8WXG9 6306 aa5.53□□□□□ -1.52
CLDN11-202ENST00000468358 KRTAP12-4P60329 112 aa5.45□□□□□ -1.54
CLDN11-202ENST00000468358 KRTAP20-2Q3LI61 65 aa5.41□□□□□ -1.54
CLDN11-202ENST00000468358 SPRR5A0A1B0GTR4 108 aa5.39□□□□□ -1.55
CLDN11-202ENST00000468358 AHNAK2Q8IVF2 5795 aa5.38□□□□□ -1.55
CLDN11-202ENST00000468358 PRAC1Q96KF2 57 aa5.37□□□□□ -1.55
CLDN11-202ENST00000468358 SYNE1Q8NF91 8797 aaKnown RBP5.31□□□□□ -1.56
CLDN11-202ENST00000468358 KRTAP5-10Q6L8G5 202 aa5.28□□□□□ -1.56
CLDN11-202ENST00000468358 MT1AP04731 61 aa5.26□□□□□ -1.57
CLDN11-202ENST00000468358 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
CLDN11-202ENST00000468358 KRTAP6-1Q3LI64 71 aa5.22□□□□□ -1.57
CLDN11-202ENST00000468358 KRTAP5-3Q6L8H2 238 aa5.22□□□□□ -1.57
CLDN11-202ENST00000468358 KRTAP5-7Q6L8G8 165 aa5.05□□□□□ -1.6
CLDN11-202ENST00000468358 KRTAP9-4Q9BYQ2 154 aa5.05□□□□□ -1.6
CLDN11-202ENST00000468358 KRTAP5-2Q701N4 177 aa5.02□□□□□ -1.61
CLDN11-202ENST00000468358 A0A0A0MQY5 61 aa5.01□□□□□ -1.61
CLDN11-202ENST00000468358 KRTAP6-2Q3LI66 62 aa4.97□□□□□ -1.61
CLDN11-202ENST00000468358 KRTAP4-11Q9BYQ6 195 aa4.9□□□□□ -1.63
CLDN11-202ENST00000468358 MT3P25713 68 aa4.82□□□□□ -1.64
CLDN11-202ENST00000468358 KRTAP5-8O75690 187 aa4.72□□□□□ -1.65
CLDN11-202ENST00000468358 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.65
CLDN11-202ENST00000468358 LUZP6Q538Z0 58 aa4.56□□□□□ -1.68
CLDN11-202ENST00000468358 KRTAP9-9Q9BYP9 154 aa4.49□□□□□ -1.69
CLDN11-202ENST00000468358 KRTAP5-1Q6L8H4 278 aa4.48□□□□□ -1.69
CLDN11-202ENST00000468358 MUC5ACP98088 5654 aa4.4□□□□□ -1.7
CLDN11-202ENST00000468358 MUC5BQ9HC84 5762 aaPredicted RBP4.4□□□□□ -1.71
CLDN11-202ENST00000468358 NDUFAF8A1L188 74 aa4.38□□□□□ -1.71
CLDN11-202ENST00000468358 AHNAKQ09666 5890 aaKnown RBP4.37□□□□□ -1.71
CLDN11-202ENST00000468358 LCE1EQ5T753 118 aa4.34□□□□□ -1.71
CLDN11-202ENST00000468358 LCE1BQ5T7P3 118 aa4.16□□□□□ -1.74
CLDN11-202ENST00000468358 KRTAP4-2Q9BYR5 136 aa4.1□□□□□ -1.75
CLDN11-202ENST00000468358 LCE3DQ9BYE3 92 aa4.08□□□□□ -1.76
CLDN11-202ENST00000468358 LCE1CQ5T751 118 aa4.03□□□□□ -1.76
CLDN11-202ENST00000468358 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
CLDN11-202ENST00000468358 INE1O15225 51 aa3.79□□□□□ -1.8
CLDN11-202ENST00000468358 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
CLDN11-202ENST00000468358 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
CLDN11-202ENST00000468358 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.83
CLDN11-202ENST00000468358 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
CLDN11-202ENST00000468358 KRTAP21-2Q3LI59 83 aa3.41□□□□□ -1.86
CLDN11-202ENST00000468358 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
CLDN11-202ENST00000468358 PHGR1C9JFL3 82 aa3.14□□□□□ -1.91
CLDN11-202ENST00000468358 PRM1P04553 51 aa3□□□□□ -1.93
CLDN11-202ENST00000468358 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
CLDN11-202ENST00000468358 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
CLDN11-202ENST00000468358 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 52.8 ms