RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 KRTAP2-3P0C7H8 128 aa4.34□□□□□ -1.71
COL4A6-205ENST00000468338 KRTAP2-4Q9BYR9 128 aa4.34□□□□□ -1.71
COL4A6-205ENST00000468338 SPATA8Q6RVD6 105 aa4.32□□□□□ -1.72
COL4A6-205ENST00000468338 CCDC179H3BU77 68 aa4.31□□□□□ -1.72
COL4A6-205ENST00000468338 A0A0D9SG42 100 aa4.29□□□□□ -1.72
COL4A6-205ENST00000468338 KRTAP12-1P59990 96 aa4.27□□□□□ -1.73
COL4A6-205ENST00000468338 A0A1B0GU69 56 aa4.26□□□□□ -1.73
COL4A6-205ENST00000468338 ATP5EP56381 51 aaPredicted RBP4.25□□□□□ -1.73
COL4A6-205ENST00000468338 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
COL4A6-205ENST00000468338 SPRR2DP22532 72 aa4.23□□□□□ -1.73
COL4A6-205ENST00000468338 SPINT4Q6UDR6 99 aa4.23□□□□□ -1.73
COL4A6-205ENST00000468338 KRTAP2-1Q9BYU5 128 aa4.22□□□□□ -1.73
COL4A6-205ENST00000468338 KRTAP19-7Q3SYF9 63 aa4.21□□□□□ -1.74
COL4A6-205ENST00000468338 K7ERS5 55 aa4.18□□□□□ -1.74
COL4A6-205ENST00000468338 LINC01558Q9Y6Z2 57 aa4.16□□□□□ -1.74
COL4A6-205ENST00000468338 MT1EP04732 61 aa4.15□□□□□ -1.75
COL4A6-205ENST00000468338 TMEM258P61165 79 aa4.15□□□□□ -1.75
COL4A6-205ENST00000468338 PRR15LQ9BU68 103 aa4.13□□□□□ -1.75
COL4A6-205ENST00000468338 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
COL4A6-205ENST00000468338 KRTAP19-3Q7Z4W3 81 aa4.1□□□□□ -1.75
COL4A6-205ENST00000468338 C10orf95Q9H7T3 257 aa4.09□□□□□ -1.75
COL4A6-205ENST00000468338 KRTAP19-5Q3LI72 72 aa4.07□□□□□ -1.76
COL4A6-205ENST00000468338 TNP1P09430 55 aa4.04□□□□□ -1.76
COL4A6-205ENST00000468338 DSTQ03001 7570 aaKnown RBP4.02□□□□□ -1.77
COL4A6-205ENST00000468338 UQCR11O14957 56 aa4.02□□□□□ -1.77
COL4A6-205ENST00000468338 MT1GP13640 62 aa4.02□□□□□ -1.77
COL4A6-205ENST00000468338 A6NED7 52 aa4□□□□□ -1.77
COL4A6-205ENST00000468338 LCE3AQ5TA76 89 aa4□□□□□ -1.77
COL4A6-205ENST00000468338 MT1LQ93083 61 aa3.98□□□□□ -1.77
COL4A6-205ENST00000468338 PP632Q6XCG6 107 aa3.95□□□□□ -1.78
COL4A6-205ENST00000468338 MT1MQ8N339 61 aa3.95□□□□□ -1.78
COL4A6-205ENST00000468338 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
COL4A6-205ENST00000468338 MIR22HGQ0VDD5 57 aa3.92□□□□□ -1.78
COL4A6-205ENST00000468338 Q1T7F1 81 aa3.92□□□□□ -1.78
COL4A6-205ENST00000468338 KRTAP9-6A8MVA2 160 aa3.9□□□□□ -1.79
COL4A6-205ENST00000468338 KRTAP12-3P60328 96 aa3.86□□□□□ -1.79
COL4A6-205ENST00000468338 KRTAP25-1Q3LHN0 102 aa3.85□□□□□ -1.79
COL4A6-205ENST00000468338 SPRR5A0A1B0GTR4 108 aa3.84□□□□□ -1.79
COL4A6-205ENST00000468338 KRTAP4-3Q9BYR4 195 aa3.83□□□□□ -1.8
COL4A6-205ENST00000468338 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
COL4A6-205ENST00000468338 RPS28P62857 69 aaKnown RBP3.78□□□□□ -1.8
COL4A6-205ENST00000468338 KRTAP5-4Q6L8H1 288 aa3.77□□□□□ -1.81
COL4A6-205ENST00000468338 MT4P47944 62 aa3.7□□□□□ -1.82
COL4A6-205ENST00000468338 PMAIP1Q13794 54 aa3.67□□□□□ -1.82
COL4A6-205ENST00000468338 HMCN1Q96RW7 5635 aa3.67□□□□□ -1.82
COL4A6-205ENST00000468338 KRTAP5-5Q701N2 237 aaPredicted RBP3.65□□□□□ -1.83
COL4A6-205ENST00000468338 GPR98Q8WXG9 6306 aa3.65□□□□□ -1.83
COL4A6-205ENST00000468338 CDC42SE1Q9NRR8 79 aa3.64□□□□□ -1.83
COL4A6-205ENST00000468338 ROMO1P60602 79 aa3.6□□□□□ -1.83
COL4A6-205ENST00000468338 LCE3DQ9BYE3 92 aa3.56□□□□□ -1.84
COL4A6-205ENST00000468338 KRTAP20-2Q3LI61 65 aa3.52□□□□□ -1.85
COL4A6-205ENST00000468338 AHNAK2Q8IVF2 5795 aa3.51□□□□□ -1.85
COL4A6-205ENST00000468338 SYNE1Q8NF91 8797 aaKnown RBP3.5□□□□□ -1.85
COL4A6-205ENST00000468338 KRTAP12-4P60329 112 aa3.49□□□□□ -1.85
COL4A6-205ENST00000468338 KRTAP5-10Q6L8G5 202 aa3.49□□□□□ -1.85
COL4A6-205ENST00000468338 BRK1Q8WUW1 75 aa3.45□□□□□ -1.86
COL4A6-205ENST00000468338 MT1AP04731 61 aa3.39□□□□□ -1.87
COL4A6-205ENST00000468338 KRTAP6-1Q3LI64 71 aa3.35□□□□□ -1.87
COL4A6-205ENST00000468338 KRTAP5-7Q6L8G8 165 aa3.35□□□□□ -1.87
COL4A6-205ENST00000468338 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.87
COL4A6-205ENST00000468338 KTN1-AS1Q86SY8 53 aa3.34□□□□□ -1.87
COL4A6-205ENST00000468338 KRTAP5-2Q701N4 177 aa3.32□□□□□ -1.88
COL4A6-205ENST00000468338 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
COL4A6-205ENST00000468338 KRTAP6-2Q3LI66 62 aa3.18□□□□□ -1.9
COL4A6-205ENST00000468338 KRTAP5-8O75690 187 aa3.11□□□□□ -1.91
COL4A6-205ENST00000468338 OBSCNQ5VST9 7968 aa3.06□□□□□ -1.92
COL4A6-205ENST00000468338 MUC5BQ9HC84 5762 aaPredicted RBP2.89□□□□□ -1.95
COL4A6-205ENST00000468338 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
COL4A6-205ENST00000468338 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
COL4A6-205ENST00000468338 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
COL4A6-205ENST00000468338 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
COL4A6-205ENST00000468338 INE1O15225 51 aa2.59□□□□□ -1.99
COL4A6-205ENST00000468338 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
COL4A6-205ENST00000468338 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
COL4A6-205ENST00000468338 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
COL4A6-205ENST00000468338 PRM1P04553 51 aa1.83□□□□□ -2.12
COL4A6-205ENST00000468338 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
COL4A6-205ENST00000468338 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 100 ms