RNA–Protein interactions for RNA: ENST00000468311.1

PFDN2-202, Transcript of prefoldin subunit 2, humanhuman

TSL 2

Gene PFDN2, Length 408 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-202ENST00000468311 KRTAP19-5Q3LI72 72 aa8.43□□□□□ -1.06
PFDN2-202ENST00000468311 UQCR11O14957 56 aa8.42□□□□□ -1.06
PFDN2-202ENST00000468311 C10orf95Q9H7T3 257 aa8.42□□□□□ -1.06
PFDN2-202ENST00000468311 KRTAP4-11Q9BYQ6 195 aa8.39□□□□□ -1.07
PFDN2-202ENST00000468311 MT1GP13640 62 aa8.34□□□□□ -1.07
PFDN2-202ENST00000468311 LCE3AQ5TA76 89 aa8.29□□□□□ -1.08
PFDN2-202ENST00000468311 PP632Q6XCG6 107 aa8.29□□□□□ -1.08
PFDN2-202ENST00000468311 MT1LQ93083 61 aa8.22□□□□□ -1.09
PFDN2-202ENST00000468311 V9GYY9 64 aa8.2□□□□□ -1.1
PFDN2-202ENST00000468311 DSTQ03001 7570 aaKnown RBP8.2□□□□□ -1.1
PFDN2-202ENST00000468311 MIR22HGQ0VDD5 57 aa8.19□□□□□ -1.1
PFDN2-202ENST00000468311 MT1MQ8N339 61 aa8.15□□□□□ -1.1
PFDN2-202ENST00000468311 Q1T7F1 81 aa8.11□□□□□ -1.11
PFDN2-202ENST00000468311 KRTAP19-4Q3LI73 84 aa8.09□□□□□ -1.11
PFDN2-202ENST00000468311 K7ERS5 55 aa8.08□□□□□ -1.12
PFDN2-202ENST00000468311 PCP4P48539 62 aa8.07□□□□□ -1.12
PFDN2-202ENST00000468311 PSPHP1O15172 72 aa8.03□□□□□ -1.12
PFDN2-202ENST00000468311 KRTAP25-1Q3LHN0 102 aa8.03□□□□□ -1.12
PFDN2-202ENST00000468311 KRTAP12-3P60328 96 aa8.01□□□□□ -1.13
PFDN2-202ENST00000468311 H3BS24 57 aa7.88□□□□□ -1.15
PFDN2-202ENST00000468311 KRTAP4-3Q9BYR4 195 aa7.87□□□□□ -1.15
PFDN2-202ENST00000468311 A6NED7 52 aa7.81□□□□□ -1.16
PFDN2-202ENST00000468311 KRTAP23-1A1A580 65 aa7.79□□□□□ -1.16
PFDN2-202ENST00000468311 RPS28P62857 69 aaKnown RBP7.77□□□□□ -1.17
PFDN2-202ENST00000468311 KRTAP5-4Q6L8H1 288 aa7.77□□□□□ -1.17
PFDN2-202ENST00000468311 KRTAP5-3Q6L8H2 238 aa7.73□□□□□ -1.17
PFDN2-202ENST00000468311 MT4P47944 62 aa7.7□□□□□ -1.18
PFDN2-202ENST00000468311 CDC42SE1Q9NRR8 79 aa7.64□□□□□ -1.19
PFDN2-202ENST00000468311 HMCN1Q96RW7 5635 aa7.59□□□□□ -1.19
PFDN2-202ENST00000468311 KRTAP15-1Q3LI76 137 aa7.54□□□□□ -1.2
PFDN2-202ENST00000468311 GPR98Q8WXG9 6306 aa7.51□□□□□ -1.21
PFDN2-202ENST00000468311 ROMO1P60602 79 aa7.5□□□□□ -1.21
PFDN2-202ENST00000468311 KRTAP5-5Q701N2 237 aaPredicted RBP7.5□□□□□ -1.21
PFDN2-202ENST00000468311 LCE3CQ5T5A8 94 aa7.39□□□□□ -1.23
PFDN2-202ENST00000468311 SPRR5A0A1B0GTR4 108 aa7.32□□□□□ -1.24
PFDN2-202ENST00000468311 KRTAP12-4P60329 112 aa7.3□□□□□ -1.24
PFDN2-202ENST00000468311 KRTAP20-2Q3LI61 65 aa7.29□□□□□ -1.24
PFDN2-202ENST00000468311 KRTAP5-10Q6L8G5 202 aa7.23□□□□□ -1.25
PFDN2-202ENST00000468311 AHNAK2Q8IVF2 5795 aa7.19□□□□□ -1.26
PFDN2-202ENST00000468311 SYNE1Q8NF91 8797 aaKnown RBP7.07□□□□□ -1.28
PFDN2-202ENST00000468311 MT1AP04731 61 aa7.01□□□□□ -1.29
PFDN2-202ENST00000468311 KRTAP5-7Q6L8G8 165 aa6.96□□□□□ -1.3
PFDN2-202ENST00000468311 KRTAP9-6A8MVA2 160 aa6.92□□□□□ -1.3
PFDN2-202ENST00000468311 KRTAP6-1Q3LI64 71 aa6.91□□□□□ -1.3
PFDN2-202ENST00000468311 KRTAP5-2Q701N4 177 aa6.82□□□□□ -1.32
PFDN2-202ENST00000468311 BRK1Q8WUW1 75 aa6.81□□□□□ -1.32
PFDN2-202ENST00000468311 SVIPQ8NHG7 77 aa6.79□□□□□ -1.32
PFDN2-202ENST00000468311 KRTAP6-2Q3LI66 62 aa6.6□□□□□ -1.35
PFDN2-202ENST00000468311 MT3P25713 68 aa6.42□□□□□ -1.38
PFDN2-202ENST00000468311 PMAIP1Q13794 54 aa6.42□□□□□ -1.38
PFDN2-202ENST00000468311 KRTAP5-8O75690 187 aa6.4□□□□□ -1.38
PFDN2-202ENST00000468311 PRO0628Q9UI54 55 aa6.35□□□□□ -1.39
PFDN2-202ENST00000468311 OBSCNQ5VST9 7968 aa6.25□□□□□ -1.41
PFDN2-202ENST00000468311 PRAC1Q96KF2 57 aa6.14□□□□□ -1.43
PFDN2-202ENST00000468311 KRTAP5-1Q6L8H4 278 aa6.08□□□□□ -1.44
PFDN2-202ENST00000468311 KTN1-AS1Q86SY8 53 aa5.97□□□□□ -1.45
PFDN2-202ENST00000468311 MUC5ACP98088 5654 aa5.96□□□□□ -1.46
PFDN2-202ENST00000468311 MUC5BQ9HC84 5762 aaPredicted RBP5.93□□□□□ -1.46
PFDN2-202ENST00000468311 LCE1EQ5T753 118 aa5.92□□□□□ -1.46
PFDN2-202ENST00000468311 AHNAKQ09666 5890 aaKnown RBP5.84□□□□□ -1.47
PFDN2-202ENST00000468311 A0A0A0MQY5 61 aa5.8□□□□□ -1.48
PFDN2-202ENST00000468311 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.78□□□□□ -1.48
PFDN2-202ENST00000468311 KRTAP5-11Q6L8G4 156 aa5.7□□□□□ -1.5
PFDN2-202ENST00000468311 LCE1CQ5T751 118 aa5.48□□□□□ -1.53
PFDN2-202ENST00000468311 LCE1BQ5T7P3 118 aa5.48□□□□□ -1.53
PFDN2-202ENST00000468311 LCE3DQ9BYE3 92 aa5.36□□□□□ -1.55
PFDN2-202ENST00000468311 LUZP6Q538Z0 58 aa5.22□□□□□ -1.57
PFDN2-202ENST00000468311 LCE3EQ5T5B0 92 aa5.05□□□□□ -1.6
PFDN2-202ENST00000468311 KRTAP4-4Q9BYR3 166 aa4.85□□□□□ -1.63
PFDN2-202ENST00000468311 LCE1FQ5T754 118 aa4.83□□□□□ -1.64
PFDN2-202ENST00000468311 KRTAP21-2Q3LI59 83 aa4.57□□□□□ -1.68
PFDN2-202ENST00000468311 NDUFAF8A1L188 74 aa4.54□□□□□ -1.68
PFDN2-202ENST00000468311 PHGR1C9JFL3 82 aa4.26□□□□□ -1.73
PFDN2-202ENST00000468311 MUC19Q7Z5P9 8384 aa3.83□□□□□ -1.8
PFDN2-202ENST00000468311 PRM1P04553 51 aa3.8□□□□□ -1.8
PFDN2-202ENST00000468311 INE1O15225 51 aa3.68□□□□□ -1.82
PFDN2-202ENST00000468311 KRTAP21-1Q3LI58 79 aa3.22□□□□□ -1.89
PFDN2-202ENST00000468311 MUC16Q8WXI7 14507 aa2.74□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 200 ms