RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 SPRR5A0A1B0GTR4 108 aa7.2□□□□□ -1.26
TMEM53-207ENST00000468117 KRTAP19-3Q7Z4W3 81 aa7.17□□□□□ -1.26
TMEM53-207ENST00000468117 KRTAP4-7Q9BYR0 210 aa7.16□□□□□ -1.26
TMEM53-207ENST00000468117 MDN1Q9NU22 5596 aa7.13□□□□□ -1.27
TMEM53-207ENST00000468117 KRTAP19-4Q3LI73 84 aa7.12□□□□□ -1.27
TMEM53-207ENST00000468117 MT1GP13640 62 aa7.1□□□□□ -1.27
TMEM53-207ENST00000468117 KRTAP6-3Q3LI67 103 aa7.08□□□□□ -1.28
TMEM53-207ENST00000468117 LCE5AQ5TCM9 118 aa7.05□□□□□ -1.28
TMEM53-207ENST00000468117 MT1MQ8N339 61 aa7.04□□□□□ -1.28
TMEM53-207ENST00000468117 LCE1AQ5T7P2 110 aa7.01□□□□□ -1.29
TMEM53-207ENST00000468117 SPRR2EP22531 72 aa6.96□□□□□ -1.29
TMEM53-207ENST00000468117 SPRR2BP35325 72 aa6.96□□□□□ -1.29
TMEM53-207ENST00000468117 SPRR2AP35326 72 aa6.96□□□□□ -1.29
TMEM53-207ENST00000468117 KRTAP4-3Q9BYR4 195 aa6.96□□□□□ -1.29
TMEM53-207ENST00000468117 LUZP6Q538Z0 58 aa6.96□□□□□ -1.3
TMEM53-207ENST00000468117 KRTAP9-7A8MTY7 169 aa6.88□□□□□ -1.31
TMEM53-207ENST00000468117 KRTAP9-6A8MVA2 160 aa6.88□□□□□ -1.31
TMEM53-207ENST00000468117 DSTQ03001 7570 aaKnown RBP6.88□□□□□ -1.31
TMEM53-207ENST00000468117 NDUFAF8A1L188 74 aa6.84□□□□□ -1.31
TMEM53-207ENST00000468117 LOC100996750A0A140TA64 210 aa6.72□□□□□ -1.33
TMEM53-207ENST00000468117 SPRR2DP22532 72 aa6.7□□□□□ -1.34
TMEM53-207ENST00000468117 NEBP20929 6669 aa6.66□□□□□ -1.34
TMEM53-207ENST00000468117 LCE3BQ5TA77 95 aa6.43□□□□□ -1.38
TMEM53-207ENST00000468117 KRTAP5-5Q701N2 237 aaPredicted RBP6.33□□□□□ -1.4
TMEM53-207ENST00000468117 KRTAP2-3P0C7H8 128 aa6.29□□□□□ -1.4
TMEM53-207ENST00000468117 KRTAP2-4Q9BYR9 128 aa6.29□□□□□ -1.4
TMEM53-207ENST00000468117 KRTAP2-1Q9BYU5 128 aa6.29□□□□□ -1.4
TMEM53-207ENST00000468117 MT1AP04731 61 aa6.2□□□□□ -1.42
TMEM53-207ENST00000468117 KRTAP6-1Q3LI64 71 aa6.19□□□□□ -1.42
TMEM53-207ENST00000468117 SYNE1Q8NF91 8797 aaKnown RBP6.1□□□□□ -1.43
TMEM53-207ENST00000468117 KRTAP20-1Q3LI63 56 aa6.09□□□□□ -1.43
TMEM53-207ENST00000468117 KRTAP2-2Q9BYT5 123 aa6.06□□□□□ -1.44
TMEM53-207ENST00000468117 KRTAP5-4Q6L8H1 288 aa6.03□□□□□ -1.44
TMEM53-207ENST00000468117 H3BS24 57 aa5.95□□□□□ -1.46
TMEM53-207ENST00000468117 A0A0A0MQY5 61 aa5.93□□□□□ -1.46
TMEM53-207ENST00000468117 LCE4AQ5TA78 99 aa5.89□□□□□ -1.47
TMEM53-207ENST00000468117 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
TMEM53-207ENST00000468117 KRTAP12-4P60329 112 aa5.87□□□□□ -1.47
TMEM53-207ENST00000468117 MT4P47944 62 aa5.86□□□□□ -1.47
TMEM53-207ENST00000468117 KRTAP4-6Q9BYQ5 205 aa5.81□□□□□ -1.48
TMEM53-207ENST00000468117 KRTAP4-9Q9BYQ8 210 aa5.81□□□□□ -1.48
TMEM53-207ENST00000468117 LCE1DQ5T752 114 aa5.74□□□□□ -1.49
TMEM53-207ENST00000468117 HMCN1Q96RW7 5635 aa5.72□□□□□ -1.49
TMEM53-207ENST00000468117 KRTAP6-2Q3LI66 62 aa5.7□□□□□ -1.5
TMEM53-207ENST00000468117 KRTAP20-2Q3LI61 65 aa5.66□□□□□ -1.5
TMEM53-207ENST00000468117 MT3P25713 68 aa5.61□□□□□ -1.51
TMEM53-207ENST00000468117 INE1O15225 51 aa5.55□□□□□ -1.52
TMEM53-207ENST00000468117 KRTAP5-2Q701N4 177 aa5.47□□□□□ -1.53
TMEM53-207ENST00000468117 KRTAP5-3Q6L8H2 238 aa5.45□□□□□ -1.54
TMEM53-207ENST00000468117 OBSCNQ5VST9 7968 aa5.43□□□□□ -1.54
TMEM53-207ENST00000468117 LCE3DQ9BYE3 92 aa5.42□□□□□ -1.54
TMEM53-207ENST00000468117 LCE3EQ5T5B0 92 aa5.26□□□□□ -1.57
TMEM53-207ENST00000468117 AHNAK2Q8IVF2 5795 aa5.02□□□□□ -1.61
TMEM53-207ENST00000468117 KRTAP4-11Q9BYQ6 195 aa4.91□□□□□ -1.62
TMEM53-207ENST00000468117 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
TMEM53-207ENST00000468117 KRTAP5-1Q6L8H4 278 aa4.75□□□□□ -1.65
TMEM53-207ENST00000468117 KRTAP5-10Q6L8G5 202 aa4.73□□□□□ -1.65
TMEM53-207ENST00000468117 KRTAP5-8O75690 187 aa4.73□□□□□ -1.65
TMEM53-207ENST00000468117 LCE1BQ5T7P3 118 aa4.63□□□□□ -1.67
TMEM53-207ENST00000468117 PRM1P04553 51 aa4.62□□□□□ -1.67
TMEM53-207ENST00000468117 MUC5ACP98088 5654 aa4.6□□□□□ -1.67
TMEM53-207ENST00000468117 KRTAP4-2Q9BYR5 136 aa4.56□□□□□ -1.68
TMEM53-207ENST00000468117 LCE1CQ5T751 118 aa4.54□□□□□ -1.68
TMEM53-207ENST00000468117 KRTAP5-7Q6L8G8 165 aa4.53□□□□□ -1.68
TMEM53-207ENST00000468117 GPR98Q8WXG9 6306 aa4.52□□□□□ -1.69
TMEM53-207ENST00000468117 KRTAP9-9Q9BYP9 154 aa4.24□□□□□ -1.73
TMEM53-207ENST00000468117 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.23□□□□□ -1.73
TMEM53-207ENST00000468117 MUC5BQ9HC84 5762 aaPredicted RBP4.14□□□□□ -1.75
TMEM53-207ENST00000468117 KRTAP21-2Q3LI59 83 aa4.04□□□□□ -1.76
TMEM53-207ENST00000468117 KRTAP5-11Q6L8G4 156 aa4□□□□□ -1.77
TMEM53-207ENST00000468117 KRTAP4-12Q9BQ66 201 aa3.85□□□□□ -1.79
TMEM53-207ENST00000468117 AHNAKQ09666 5890 aaKnown RBP3.74□□□□□ -1.81
TMEM53-207ENST00000468117 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.82
TMEM53-207ENST00000468117 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
TMEM53-207ENST00000468117 PHGR1C9JFL3 82 aa3.45□□□□□ -1.86
TMEM53-207ENST00000468117 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
TMEM53-207ENST00000468117 KRTAP21-1Q3LI58 79 aa2.79□□□□□ -1.96
TMEM53-207ENST00000468117 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 122.8 ms