RNA–Protein interactions for RNA: ENST00000468108.1

CCDC66-211, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-211ENST00000468108 FLGP20930 4061 aaPredicted RBP2.49□□□□□ -2.01
CCDC66-211ENST00000468108 M0QZ58 72 aa2.44□□□□□ -2.02
CCDC66-211ENST00000468108 FAT4Q6V0I7 4981 aa2.42□□□□□ -2.02
CCDC66-211ENST00000468108 MT1HP80294 61 aa2.4□□□□□ -2.03
CCDC66-211ENST00000468108 KRTAP13-4Q3LI77 160 aa2.4□□□□□ -2.03
CCDC66-211ENST00000468108 CRIPTQ9P021 101 aa2.4□□□□□ -2.03
CCDC66-211ENST00000468108 M0R2T5 61 aa2.38□□□□□ -2.03
CCDC66-211ENST00000468108 P0C880 135 aa2.38□□□□□ -2.03
CCDC66-211ENST00000468108 A0A0D9SG42 100 aa2.37□□□□□ -2.03
CCDC66-211ENST00000468108 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
CCDC66-211ENST00000468108 KRTAP12-1P59990 96 aa2.36□□□□□ -2.03
CCDC66-211ENST00000468108 SPINT4Q6UDR6 99 aa2.35□□□□□ -2.03
CCDC66-211ENST00000468108 R4GN34 69 aa2.33□□□□□ -2.04
CCDC66-211ENST00000468108 MT2AP02795 61 aa2.3□□□□□ -2.04
CCDC66-211ENST00000468108 KRTAP10-10P60014 251 aa2.29□□□□□ -2.04
CCDC66-211ENST00000468108 SPRR2GQ9BYE4 73 aa2.28□□□□□ -2.04
CCDC66-211ENST00000468108 C10orf95Q9H7T3 257 aa2.28□□□□□ -2.04
CCDC66-211ENST00000468108 MT1FP04733 61 aa2.27□□□□□ -2.05
CCDC66-211ENST00000468108 CAMK2N1Q7Z7J9 78 aa2.27□□□□□ -2.05
CCDC66-211ENST00000468108 LUZP6Q538Z0 58 aa2.23□□□□□ -2.05
CCDC66-211ENST00000468108 KRTAP19-8Q3LI54 63 aa2.22□□□□□ -2.05
CCDC66-211ENST00000468108 SPRR5A0A1B0GTR4 108 aa2.21□□□□□ -2.06
CCDC66-211ENST00000468108 PLAC4Q8WY50 150 aa2.21□□□□□ -2.06
CCDC66-211ENST00000468108 MT1BP07438 61 aa2.16□□□□□ -2.06
CCDC66-211ENST00000468108 TNP1P09430 55 aa2.15□□□□□ -2.07
CCDC66-211ENST00000468108 USH2AO75445 5202 aa2.14□□□□□ -2.07
CCDC66-211ENST00000468108 PRO2289Q9P1D8 64 aa2.11□□□□□ -2.07
CCDC66-211ENST00000468108 MT1XP80297 61 aa2.09□□□□□ -2.07
CCDC66-211ENST00000468108 SSPOA2VEC9 5147 aa2.07□□□□□ -2.08
CCDC66-211ENST00000468108 KRTAP19-6Q3LI70 58 aa2.06□□□□□ -2.08
CCDC66-211ENST00000468108 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.08
CCDC66-211ENST00000468108 CRCT1Q9UGL9 99 aa2.03□□□□□ -2.08
CCDC66-211ENST00000468108 KRTAP8-1Q8IUC2 63 aa1.98□□□□□ -2.09
CCDC66-211ENST00000468108 FSIP2Q5CZC0 6907 aa1.97□□□□□ -2.09
CCDC66-211ENST00000468108 FCGBPQ9Y6R7 5405 aaPredicted RBP1.96□□□□□ -2.1
CCDC66-211ENST00000468108 INE1O15225 51 aa1.93□□□□□ -2.1
CCDC66-211ENST00000468108 KMT2DO14686 5537 aa1.93□□□□□ -2.1
CCDC66-211ENST00000468108 KRTAP12-3P60328 96 aa1.91□□□□□ -2.1
CCDC66-211ENST00000468108 KRTAP19-5Q3LI72 72 aa1.89□□□□□ -2.11
CCDC66-211ENST00000468108 KRTAP19-7Q3SYF9 63 aa1.87□□□□□ -2.11
CCDC66-211ENST00000468108 MACF1Q9UPN3 7388 aaKnown RBP1.84□□□□□ -2.11
CCDC66-211ENST00000468108 MT1EP04732 61 aa1.83□□□□□ -2.12
CCDC66-211ENST00000468108 SPRR2FQ96RM1 72 aa1.8□□□□□ -2.12
CCDC66-211ENST00000468108 MT1GP13640 62 aa1.79□□□□□ -2.12
CCDC66-211ENST00000468108 KRTAP6-3Q3LI67 103 aa1.79□□□□□ -2.12
CCDC66-211ENST00000468108 MT1LQ93083 61 aa1.79□□□□□ -2.12
CCDC66-211ENST00000468108 KRTAP19-3Q7Z4W3 81 aa1.78□□□□□ -2.12
CCDC66-211ENST00000468108 MUC12Q9UKN1 5478 aa1.77□□□□□ -2.13
CCDC66-211ENST00000468108 KRTAP12-4P60329 112 aa1.77□□□□□ -2.13
CCDC66-211ENST00000468108 SYNE2Q8WXH0 6885 aaKnown RBP1.77□□□□□ -2.13
CCDC66-211ENST00000468108 MT1MQ8N339 61 aa1.74□□□□□ -2.13
CCDC66-211ENST00000468108 MDN1Q9NU22 5596 aa1.73□□□□□ -2.13
CCDC66-211ENST00000468108 SPRR2EP22531 72 aa1.71□□□□□ -2.14
CCDC66-211ENST00000468108 SPRR2BP35325 72 aa1.71□□□□□ -2.14
CCDC66-211ENST00000468108 SPRR2AP35326 72 aa1.71□□□□□ -2.14
CCDC66-211ENST00000468108 KRTAP2-3P0C7H8 128 aa1.7□□□□□ -2.14
CCDC66-211ENST00000468108 KRTAP2-4Q9BYR9 128 aa1.7□□□□□ -2.14
CCDC66-211ENST00000468108 KRTAP2-1Q9BYU5 128 aa1.7□□□□□ -2.14
CCDC66-211ENST00000468108 SPRR2DP22532 72 aa1.65□□□□□ -2.15
CCDC66-211ENST00000468108 DSTQ03001 7570 aaKnown RBP1.63□□□□□ -2.15
CCDC66-211ENST00000468108 NEBP20929 6669 aa1.62□□□□□ -2.15
CCDC66-211ENST00000468108 MT1AP04731 61 aa1.54□□□□□ -2.16
CCDC66-211ENST00000468108 KRTAP20-1Q3LI63 56 aa1.52□□□□□ -2.17
CCDC66-211ENST00000468108 KRTAP6-1Q3LI64 71 aa1.51□□□□□ -2.17
CCDC66-211ENST00000468108 SYNE1Q8NF91 8797 aaKnown RBP1.51□□□□□ -2.17
CCDC66-211ENST00000468108 MT4P47944 62 aa1.42□□□□□ -2.18
CCDC66-211ENST00000468108 KRTAP20-2Q3LI61 65 aa1.4□□□□□ -2.19
CCDC66-211ENST00000468108 KRTAP6-2Q3LI66 62 aa1.39□□□□□ -2.19
CCDC66-211ENST00000468108 PRM1P04553 51 aa1.28□□□□□ -2.2
CCDC66-211ENST00000468108 AHNAK2Q8IVF2 5795 aa1.25□□□□□ -2.21
CCDC66-211ENST00000468108 KRTAP5-10Q6L8G5 202 aa1.18□□□□□ -2.22
CCDC66-211ENST00000468108 MUC5ACP98088 5654 aa1.13□□□□□ -2.23
CCDC66-211ENST00000468108 GPR98Q8WXG9 6306 aa1.1□□□□□ -2.23
CCDC66-211ENST00000468108 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
CCDC66-211ENST00000468108 MUC5BQ9HC84 5762 aaPredicted RBP1.03□□□□□ -2.24
CCDC66-211ENST00000468108 AHNAKQ09666 5890 aaKnown RBP0.95□□□□□ -2.26
CCDC66-211ENST00000468108 PHGR1C9JFL3 82 aa0.86□□□□□ -2.27
CCDC66-211ENST00000468108 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 35.4 ms