RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 SPRR2BP35325 72 aa5.62□□□□□ -1.51
SNIP1-202ENST00000468040 SPRR2AP35326 72 aa5.62□□□□□ -1.51
SNIP1-202ENST00000468040 MT1EP04732 61 aa5.61□□□□□ -1.51
SNIP1-202ENST00000468040 LCE1AQ5T7P2 110 aa5.6□□□□□ -1.51
SNIP1-202ENST00000468040 LCE4AQ5TA78 99 aa5.58□□□□□ -1.52
SNIP1-202ENST00000468040 PP632Q6XCG6 107 aa5.56□□□□□ -1.52
SNIP1-202ENST00000468040 KRTAP4-12Q9BQ66 201 aa5.56□□□□□ -1.52
SNIP1-202ENST00000468040 PMAIP1Q13794 54 aa5.55□□□□□ -1.52
SNIP1-202ENST00000468040 KRTAP12-3P60328 96 aa5.54□□□□□ -1.52
SNIP1-202ENST00000468040 MDN1Q9NU22 5596 aa5.53□□□□□ -1.52
SNIP1-202ENST00000468040 PRO0628Q9UI54 55 aa5.53□□□□□ -1.52
SNIP1-202ENST00000468040 KRTAP19-3Q7Z4W3 81 aa5.49□□□□□ -1.53
SNIP1-202ENST00000468040 KRTAP20-1Q3LI63 56 aa5.48□□□□□ -1.53
SNIP1-202ENST00000468040 KRTAP9-4Q9BYQ2 154 aa5.48□□□□□ -1.53
SNIP1-202ENST00000468040 LCE5AQ5TCM9 118 aa5.44□□□□□ -1.54
SNIP1-202ENST00000468040 SPRR2DP22532 72 aa5.43□□□□□ -1.54
SNIP1-202ENST00000468040 MT1LQ93083 61 aa5.43□□□□□ -1.54
SNIP1-202ENST00000468040 KRTAP9-9Q9BYP9 154 aa5.42□□□□□ -1.54
SNIP1-202ENST00000468040 MT1GP13640 62 aa5.41□□□□□ -1.54
SNIP1-202ENST00000468040 PRAC1Q96KF2 57 aa5.39□□□□□ -1.55
SNIP1-202ENST00000468040 LCE3BQ5TA77 95 aa5.31□□□□□ -1.56
SNIP1-202ENST00000468040 MT1MQ8N339 61 aa5.31□□□□□ -1.56
SNIP1-202ENST00000468040 KRTAP2-3P0C7H8 128 aa5.3□□□□□ -1.56
SNIP1-202ENST00000468040 KRTAP2-4Q9BYR9 128 aa5.3□□□□□ -1.56
SNIP1-202ENST00000468040 KTN1-AS1Q86SY8 53 aa5.19□□□□□ -1.58
SNIP1-202ENST00000468040 KRTAP2-2Q9BYT5 123 aa5.17□□□□□ -1.58
SNIP1-202ENST00000468040 KRTAP2-1Q9BYU5 128 aa5.17□□□□□ -1.58
SNIP1-202ENST00000468040 KRTAP4-7Q9BYR0 210 aa5.16□□□□□ -1.58
SNIP1-202ENST00000468040 LCE3CQ5T5A8 94 aa5.14□□□□□ -1.59
SNIP1-202ENST00000468040 KRTAP4-3Q9BYR4 195 aa5.14□□□□□ -1.59
SNIP1-202ENST00000468040 DSTQ03001 7570 aaKnown RBP5.09□□□□□ -1.6
SNIP1-202ENST00000468040 LCE1DQ5T752 114 aa4.98□□□□□ -1.61
SNIP1-202ENST00000468040 GPR98Q8WXG9 6306 aa4.96□□□□□ -1.62
SNIP1-202ENST00000468040 NDUFAF8A1L188 74 aa4.9□□□□□ -1.63
SNIP1-202ENST00000468040 KRTAP5-5Q701N2 237 aaPredicted RBP4.83□□□□□ -1.64
SNIP1-202ENST00000468040 KRTAP5-4Q6L8H1 288 aa4.81□□□□□ -1.64
SNIP1-202ENST00000468040 KRTAP9-6A8MVA2 160 aa4.8□□□□□ -1.64
SNIP1-202ENST00000468040 KRTAP4-9Q9BYQ8 210 aa4.73□□□□□ -1.65
SNIP1-202ENST00000468040 SPRR5A0A1B0GTR4 108 aa4.71□□□□□ -1.66
SNIP1-202ENST00000468040 MT4P47944 62 aa4.7□□□□□ -1.66
SNIP1-202ENST00000468040 KRTAP4-11Q9BYQ6 195 aa4.67□□□□□ -1.66
SNIP1-202ENST00000468040 MT1AP04731 61 aa4.64□□□□□ -1.67
SNIP1-202ENST00000468040 KRTAP12-4P60329 112 aa4.63□□□□□ -1.67
SNIP1-202ENST00000468040 MT3P25713 68 aa4.56□□□□□ -1.68
SNIP1-202ENST00000468040 KRTAP6-1Q3LI64 71 aa4.56□□□□□ -1.68
SNIP1-202ENST00000468040 HMCN1Q96RW7 5635 aa4.53□□□□□ -1.68
SNIP1-202ENST00000468040 KRTAP20-2Q3LI61 65 aa4.51□□□□□ -1.69
SNIP1-202ENST00000468040 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
SNIP1-202ENST00000468040 SYNE1Q8NF91 8797 aaKnown RBP4.45□□□□□ -1.7
SNIP1-202ENST00000468040 LUZP6Q538Z0 58 aa4.4□□□□□ -1.71
SNIP1-202ENST00000468040 AHNAK2Q8IVF2 5795 aa4.37□□□□□ -1.71
SNIP1-202ENST00000468040 KRTAP5-3Q6L8H2 238 aa4.35□□□□□ -1.71
SNIP1-202ENST00000468040 KRTAP5-10Q6L8G5 202 aa4.34□□□□□ -1.71
SNIP1-202ENST00000468040 KRTAP5-2Q701N4 177 aa4.3□□□□□ -1.72
SNIP1-202ENST00000468040 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
SNIP1-202ENST00000468040 KRTAP5-7Q6L8G8 165 aa4.22□□□□□ -1.73
SNIP1-202ENST00000468040 LCE1FQ5T754 118 aa4.2□□□□□ -1.74
SNIP1-202ENST00000468040 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
SNIP1-202ENST00000468040 KRTAP5-8O75690 187 aa3.86□□□□□ -1.79
SNIP1-202ENST00000468040 LCE3DQ9BYE3 92 aa3.8□□□□□ -1.8
SNIP1-202ENST00000468040 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
SNIP1-202ENST00000468040 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
SNIP1-202ENST00000468040 AHNAKQ09666 5890 aaKnown RBP3.75□□□□□ -1.81
SNIP1-202ENST00000468040 MUC5ACP98088 5654 aa3.72□□□□□ -1.81
SNIP1-202ENST00000468040 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
SNIP1-202ENST00000468040 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.83
SNIP1-202ENST00000468040 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
SNIP1-202ENST00000468040 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
SNIP1-202ENST00000468040 INE1O15225 51 aa3.27□□□□□ -1.89
SNIP1-202ENST00000468040 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
SNIP1-202ENST00000468040 KRTAP5-11Q6L8G4 156 aa3.15□□□□□ -1.91
SNIP1-202ENST00000468040 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
SNIP1-202ENST00000468040 PRM1P04553 51 aa2.98□□□□□ -1.93
SNIP1-202ENST00000468040 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
SNIP1-202ENST00000468040 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
SNIP1-202ENST00000468040 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.04
SNIP1-202ENST00000468040 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
SNIP1-202ENST00000468040 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 8.5 ms