RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 SPRR2GQ9BYE4 73 aa2.2□□□□□ -2.06
U2AF1-207ENST00000468039 H0YAA0 97 aa2.19□□□□□ -2.06
U2AF1-207ENST00000468039 KRTAP19-8Q3LI54 63 aa2.18□□□□□ -2.06
U2AF1-207ENST00000468039 Q5VV11 94 aa2.18□□□□□ -2.06
U2AF1-207ENST00000468039 MACF1Q9UPN3 7388 aaKnown RBP2.17□□□□□ -2.06
U2AF1-207ENST00000468039 P0C880 135 aa2.17□□□□□ -2.06
U2AF1-207ENST00000468039 ACYP2P14621 99 aa2.17□□□□□ -2.06
U2AF1-207ENST00000468039 CYSTM1Q9H1C7 97 aa2.17□□□□□ -2.06
U2AF1-207ENST00000468039 CRIPTQ9P021 101 aa2.17□□□□□ -2.06
U2AF1-207ENST00000468039 CHKB-CPT1BH3BT56 60 aa2.16□□□□□ -2.06
U2AF1-207ENST00000468039 COX7CP15954 63 aa2.16□□□□□ -2.06
U2AF1-207ENST00000468039 SYNE2Q8WXH0 6885 aaKnown RBP2.15□□□□□ -2.06
U2AF1-207ENST00000468039 M0QZ58 72 aa2.14□□□□□ -2.07
U2AF1-207ENST00000468039 A6NN06 94 aa2.13□□□□□ -2.07
U2AF1-207ENST00000468039 Q1T7F1 81 aa2.13□□□□□ -2.07
U2AF1-207ENST00000468039 COA5Q86WW8 74 aa2.13□□□□□ -2.07
U2AF1-207ENST00000468039 H7BZZ5 65 aa2.12□□□□□ -2.07
U2AF1-207ENST00000468039 SPTSSBQ8NFR3 76 aa2.12□□□□□ -2.07
U2AF1-207ENST00000468039 CCDC179H3BU77 68 aa2.11□□□□□ -2.07
U2AF1-207ENST00000468039 KRTAP6-3Q3LI67 103 aa2.1□□□□□ -2.07
U2AF1-207ENST00000468039 KMT2DO14686 5537 aa2.09□□□□□ -2.07
U2AF1-207ENST00000468039 MUC12Q9UKN1 5478 aa2.09□□□□□ -2.08
U2AF1-207ENST00000468039 MT1XP80297 61 aa2.08□□□□□ -2.08
U2AF1-207ENST00000468039 PLAC4Q8WY50 150 aa2.08□□□□□ -2.08
U2AF1-207ENST00000468039 KRTAP13-4Q3LI77 160 aa2.07□□□□□ -2.08
U2AF1-207ENST00000468039 MIR22HGQ0VDD5 57 aa2.05□□□□□ -2.08
U2AF1-207ENST00000468039 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
U2AF1-207ENST00000468039 KRTAP20-1Q3LI63 56 aa2.03□□□□□ -2.08
U2AF1-207ENST00000468039 SERP1Q9Y6X1 66 aa2.03□□□□□ -2.08
U2AF1-207ENST00000468039 MDN1Q9NU22 5596 aa2.03□□□□□ -2.08
U2AF1-207ENST00000468039 NEBP20929 6669 aa2.03□□□□□ -2.08
U2AF1-207ENST00000468039 A0A0D9SG42 100 aa2.02□□□□□ -2.09
U2AF1-207ENST00000468039 SPATA8Q6RVD6 105 aa2.02□□□□□ -2.09
U2AF1-207ENST00000468039 ATP5EP56381 51 aaPredicted RBP2.01□□□□□ -2.09
U2AF1-207ENST00000468039 A0A1B0GU69 56 aa2□□□□□ -2.09
U2AF1-207ENST00000468039 KRTAP2-3P0C7H8 128 aa1.96□□□□□ -2.1
U2AF1-207ENST00000468039 KRTAP12-1P59990 96 aa1.96□□□□□ -2.1
U2AF1-207ENST00000468039 KRTAP8-1Q8IUC2 63 aa1.96□□□□□ -2.1
U2AF1-207ENST00000468039 SPRR2FQ96RM1 72 aa1.96□□□□□ -2.1
U2AF1-207ENST00000468039 KRTAP2-4Q9BYR9 128 aa1.96□□□□□ -2.1
U2AF1-207ENST00000468039 PRR15LQ9BU68 103 aa1.94□□□□□ -2.1
U2AF1-207ENST00000468039 LINC01558Q9Y6Z2 57 aa1.94□□□□□ -2.1
U2AF1-207ENST00000468039 CDC42SE1Q9NRR8 79 aa1.92□□□□□ -2.1
U2AF1-207ENST00000468039 INE1O15225 51 aa1.91□□□□□ -2.1
U2AF1-207ENST00000468039 SPRR2EP22531 72 aa1.91□□□□□ -2.1
U2AF1-207ENST00000468039 SPRR2BP35325 72 aa1.91□□□□□ -2.1
U2AF1-207ENST00000468039 SPRR2AP35326 72 aa1.91□□□□□ -2.1
U2AF1-207ENST00000468039 KRTAP2-1Q9BYU5 128 aa1.89□□□□□ -2.11
U2AF1-207ENST00000468039 UQCR11O14957 56 aa1.87□□□□□ -2.11
U2AF1-207ENST00000468039 C10orf95Q9H7T3 257 aa1.87□□□□□ -2.11
U2AF1-207ENST00000468039 SPRR2DP22532 72 aa1.85□□□□□ -2.11
U2AF1-207ENST00000468039 KRTAP19-7Q3SYF9 63 aa1.85□□□□□ -2.11
U2AF1-207ENST00000468039 MT1EP04732 61 aa1.84□□□□□ -2.11
U2AF1-207ENST00000468039 KRTAP19-5Q3LI72 72 aa1.84□□□□□ -2.11
U2AF1-207ENST00000468039 TNP1P09430 55 aa1.83□□□□□ -2.12
U2AF1-207ENST00000468039 KRTAP12-3P60328 96 aa1.8□□□□□ -2.12
U2AF1-207ENST00000468039 KRTAP19-3Q7Z4W3 81 aa1.79□□□□□ -2.12
U2AF1-207ENST00000468039 KRTAP12-4P60329 112 aa1.76□□□□□ -2.13
U2AF1-207ENST00000468039 MT1LQ93083 61 aa1.76□□□□□ -2.13
U2AF1-207ENST00000468039 MT1GP13640 62 aa1.74□□□□□ -2.13
U2AF1-207ENST00000468039 MT1MQ8N339 61 aa1.74□□□□□ -2.13
U2AF1-207ENST00000468039 DSTQ03001 7570 aaKnown RBP1.74□□□□□ -2.13
U2AF1-207ENST00000468039 GPR98Q8WXG9 6306 aa1.66□□□□□ -2.14
U2AF1-207ENST00000468039 MT4P47944 62 aa1.62□□□□□ -2.15
U2AF1-207ENST00000468039 AHNAK2Q8IVF2 5795 aa1.61□□□□□ -2.15
U2AF1-207ENST00000468039 SYNE1Q8NF91 8797 aaKnown RBP1.57□□□□□ -2.16
U2AF1-207ENST00000468039 KRTAP5-10Q6L8G5 202 aa1.56□□□□□ -2.16
U2AF1-207ENST00000468039 KRTAP20-2Q3LI61 65 aa1.52□□□□□ -2.17
U2AF1-207ENST00000468039 KRTAP6-1Q3LI64 71 aa1.5□□□□□ -2.17
U2AF1-207ENST00000468039 MT1AP04731 61 aa1.49□□□□□ -2.17
U2AF1-207ENST00000468039 KRTAP6-2Q3LI66 62 aa1.41□□□□□ -2.18
U2AF1-207ENST00000468039 MUC5ACP98088 5654 aa1.33□□□□□ -2.2
U2AF1-207ENST00000468039 AHNAKQ09666 5890 aaKnown RBP1.32□□□□□ -2.2
U2AF1-207ENST00000468039 MUC5BQ9HC84 5762 aaPredicted RBP1.3□□□□□ -2.2
U2AF1-207ENST00000468039 PHGR1C9JFL3 82 aa0.94□□□□□ -2.26
U2AF1-207ENST00000468039 PRM1P04553 51 aa0.9□□□□□ -2.27
U2AF1-207ENST00000468039 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
U2AF1-207ENST00000468039 KRTAP21-1Q3LI58 79 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 49.1 ms