RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 SPINT4Q6UDR6 99 aa3.89□□□□□ -1.79
SSR3-205ENST00000467789 KRTAP19-7Q3SYF9 63 aa3.88□□□□□ -1.79
SSR3-205ENST00000467789 KRTAP12-1P59990 96 aa3.86□□□□□ -1.79
SSR3-205ENST00000467789 SMIM26A0A096LP01 95 aa3.85□□□□□ -1.79
SSR3-205ENST00000467789 MT1EP04732 61 aa3.85□□□□□ -1.79
SSR3-205ENST00000467789 KRTAP19-3Q7Z4W3 81 aa3.85□□□□□ -1.79
SSR3-205ENST00000467789 CYSTM1Q9H1C7 97 aa3.85□□□□□ -1.79
SSR3-205ENST00000467789 A0A1B0GU69 56 aa3.84□□□□□ -1.79
SSR3-205ENST00000467789 DSTQ03001 7570 aaKnown RBP3.83□□□□□ -1.8
SSR3-205ENST00000467789 ANAPC13Q9BS18 74 aa3.8□□□□□ -1.8
SSR3-205ENST00000467789 MT1GP13640 62 aa3.78□□□□□ -1.8
SSR3-205ENST00000467789 PP632Q6XCG6 107 aa3.77□□□□□ -1.81
SSR3-205ENST00000467789 KRTAP19-5Q3LI72 72 aa3.76□□□□□ -1.81
SSR3-205ENST00000467789 ATP5EP56381 51 aaPredicted RBP3.75□□□□□ -1.81
SSR3-205ENST00000467789 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
SSR3-205ENST00000467789 PRR15LQ9BU68 103 aa3.75□□□□□ -1.81
SSR3-205ENST00000467789 A8MU10 97 aa3.73□□□□□ -1.81
SSR3-205ENST00000467789 TNP1P09430 55 aa3.73□□□□□ -1.81
SSR3-205ENST00000467789 KRTAP9-6A8MVA2 160 aa3.68□□□□□ -1.82
SSR3-205ENST00000467789 CCDC179H3BU77 68 aa3.68□□□□□ -1.82
SSR3-205ENST00000467789 MT1LQ93083 61 aa3.68□□□□□ -1.82
SSR3-205ENST00000467789 C10orf95Q9H7T3 257 aa3.68□□□□□ -1.82
SSR3-205ENST00000467789 MT1MQ8N339 61 aa3.67□□□□□ -1.82
SSR3-205ENST00000467789 LINC01558Q9Y6Z2 57 aa3.67□□□□□ -1.82
SSR3-205ENST00000467789 LCE3AQ5TA76 89 aa3.66□□□□□ -1.82
SSR3-205ENST00000467789 UQCR11O14957 56 aa3.62□□□□□ -1.83
SSR3-205ENST00000467789 TMEM258P61165 79 aa3.61□□□□□ -1.83
SSR3-205ENST00000467789 HMCN1Q96RW7 5635 aa3.56□□□□□ -1.84
SSR3-205ENST00000467789 KRTAP12-3P60328 96 aa3.55□□□□□ -1.84
SSR3-205ENST00000467789 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
SSR3-205ENST00000467789 MT4P47944 62 aa3.54□□□□□ -1.84
SSR3-205ENST00000467789 RPS28P62857 69 aaKnown RBP3.53□□□□□ -1.84
SSR3-205ENST00000467789 KRTAP4-3Q9BYR4 195 aa3.53□□□□□ -1.84
SSR3-205ENST00000467789 V9GYY9 64 aa3.52□□□□□ -1.85
SSR3-205ENST00000467789 KRTAP25-1Q3LHN0 102 aa3.51□□□□□ -1.85
SSR3-205ENST00000467789 MIR22HGQ0VDD5 57 aa3.5□□□□□ -1.85
SSR3-205ENST00000467789 K7ERS5 55 aa3.49□□□□□ -1.85
SSR3-205ENST00000467789 AHNAK2Q8IVF2 5795 aa3.49□□□□□ -1.85
SSR3-205ENST00000467789 PRO0628Q9UI54 55 aa3.48□□□□□ -1.85
SSR3-205ENST00000467789 KRTAP5-10Q6L8G5 202 aa3.41□□□□□ -1.86
SSR3-205ENST00000467789 Q1T7F1 81 aa3.4□□□□□ -1.87
SSR3-205ENST00000467789 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
SSR3-205ENST00000467789 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
SSR3-205ENST00000467789 PSPHP1O15172 72 aa3.37□□□□□ -1.87
SSR3-205ENST00000467789 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
SSR3-205ENST00000467789 SPRR5A0A1B0GTR4 108 aa3.36□□□□□ -1.87
SSR3-205ENST00000467789 KRTAP5-7Q6L8G8 165 aa3.35□□□□□ -1.87
SSR3-205ENST00000467789 KRTAP12-4P60329 112 aa3.34□□□□□ -1.87
SSR3-205ENST00000467789 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
SSR3-205ENST00000467789 PMAIP1Q13794 54 aa3.3□□□□□ -1.88
SSR3-205ENST00000467789 A6NED7 52 aa3.29□□□□□ -1.88
SSR3-205ENST00000467789 CDC42SE1Q9NRR8 79 aa3.27□□□□□ -1.89
SSR3-205ENST00000467789 BRK1Q8WUW1 75 aa3.26□□□□□ -1.89
SSR3-205ENST00000467789 SYNE1Q8NF91 8797 aaKnown RBP3.21□□□□□ -1.9
SSR3-205ENST00000467789 ROMO1P60602 79 aa3.2□□□□□ -1.9
SSR3-205ENST00000467789 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
SSR3-205ENST00000467789 KTN1-AS1Q86SY8 53 aa3.16□□□□□ -1.9
SSR3-205ENST00000467789 MT1AP04731 61 aa3.14□□□□□ -1.91
SSR3-205ENST00000467789 AHNAKQ09666 5890 aaKnown RBP3.11□□□□□ -1.91
SSR3-205ENST00000467789 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
SSR3-205ENST00000467789 KRTAP5-2Q701N4 177 aa3.09□□□□□ -1.91
SSR3-205ENST00000467789 MUC5ACP98088 5654 aa3□□□□□ -1.93
SSR3-205ENST00000467789 OBSCNQ5VST9 7968 aa2.99□□□□□ -1.93
SSR3-205ENST00000467789 KRTAP6-2Q3LI66 62 aa2.97□□□□□ -1.93
SSR3-205ENST00000467789 KRTAP5-8O75690 187 aa2.95□□□□□ -1.94
SSR3-205ENST00000467789 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
SSR3-205ENST00000467789 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
SSR3-205ENST00000467789 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
SSR3-205ENST00000467789 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
SSR3-205ENST00000467789 LUZP6Q538Z0 58 aa2.62□□□□□ -1.99
SSR3-205ENST00000467789 INE1O15225 51 aa2.23□□□□□ -2.05
SSR3-205ENST00000467789 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
SSR3-205ENST00000467789 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
SSR3-205ENST00000467789 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
SSR3-205ENST00000467789 PRM1P04553 51 aa1.61□□□□□ -2.15
SSR3-205ENST00000467789 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
SSR3-205ENST00000467789 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 10.5 ms