RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 UQCR11O14957 56 aa6.45□□□□□ -1.38
CGREF1-208ENST00000467539 MT1MQ8N339 61 aa6.42□□□□□ -1.38
CGREF1-208ENST00000467539 Q1T7F1 81 aa6.36□□□□□ -1.39
CGREF1-208ENST00000467539 KRTAP4-9Q9BYQ8 210 aa6.36□□□□□ -1.39
CGREF1-208ENST00000467539 MIR22HGQ0VDD5 57 aa6.29□□□□□ -1.4
CGREF1-208ENST00000467539 KRTAP12-3P60328 96 aa6.26□□□□□ -1.41
CGREF1-208ENST00000467539 KRTAP4-3Q9BYR4 195 aa6.26□□□□□ -1.41
CGREF1-208ENST00000467539 LCE4AQ5TA78 99 aa6.25□□□□□ -1.41
CGREF1-208ENST00000467539 LCE1DQ5T752 114 aa6.22□□□□□ -1.41
CGREF1-208ENST00000467539 PSPHP1O15172 72 aa6.21□□□□□ -1.42
CGREF1-208ENST00000467539 KRTAP25-1Q3LHN0 102 aa6.19□□□□□ -1.42
CGREF1-208ENST00000467539 K7ERS5 55 aa6.17□□□□□ -1.42
CGREF1-208ENST00000467539 KRTAP5-4Q6L8H1 288 aa6.14□□□□□ -1.43
CGREF1-208ENST00000467539 MT4P47944 62 aa6.13□□□□□ -1.43
CGREF1-208ENST00000467539 KRTAP4-7Q9BYR0 210 aa6.13□□□□□ -1.43
CGREF1-208ENST00000467539 HMCN1Q96RW7 5635 aa6.1□□□□□ -1.43
CGREF1-208ENST00000467539 A6NED7 52 aa6.08□□□□□ -1.44
CGREF1-208ENST00000467539 GPR98Q8WXG9 6306 aa6.05□□□□□ -1.44
CGREF1-208ENST00000467539 KRTAP23-1A1A580 65 aa6.01□□□□□ -1.45
CGREF1-208ENST00000467539 KRTAP19-4Q3LI73 84 aa6□□□□□ -1.45
CGREF1-208ENST00000467539 KRTAP4-6Q9BYQ5 205 aa6□□□□□ -1.45
CGREF1-208ENST00000467539 CDC42SE1Q9NRR8 79 aa5.94□□□□□ -1.46
CGREF1-208ENST00000467539 KRTAP5-5Q701N2 237 aaPredicted RBP5.9□□□□□ -1.46
CGREF1-208ENST00000467539 KRTAP15-1Q3LI76 137 aa5.87□□□□□ -1.47
CGREF1-208ENST00000467539 AHNAK2Q8IVF2 5795 aa5.86□□□□□ -1.47
CGREF1-208ENST00000467539 LOC100996750A0A140TA64 210 aa5.81□□□□□ -1.48
CGREF1-208ENST00000467539 SPRR5A0A1B0GTR4 108 aa5.78□□□□□ -1.48
CGREF1-208ENST00000467539 LCE3CQ5T5A8 94 aa5.78□□□□□ -1.48
CGREF1-208ENST00000467539 KRTAP20-2Q3LI61 65 aa5.77□□□□□ -1.49
CGREF1-208ENST00000467539 KRTAP5-10Q6L8G5 202 aa5.77□□□□□ -1.49
CGREF1-208ENST00000467539 KRTAP12-4P60329 112 aa5.76□□□□□ -1.49
CGREF1-208ENST00000467539 ROMO1P60602 79 aa5.76□□□□□ -1.49
CGREF1-208ENST00000467539 BRK1Q8WUW1 75 aa5.76□□□□□ -1.49
CGREF1-208ENST00000467539 KRTAP5-3Q6L8H2 238 aa5.66□□□□□ -1.5
CGREF1-208ENST00000467539 SYNE1Q8NF91 8797 aaKnown RBP5.64□□□□□ -1.51
CGREF1-208ENST00000467539 KRTAP5-7Q6L8G8 165 aa5.56□□□□□ -1.52
CGREF1-208ENST00000467539 PRO0628Q9UI54 55 aa5.51□□□□□ -1.53
CGREF1-208ENST00000467539 MT1AP04731 61 aa5.5□□□□□ -1.53
CGREF1-208ENST00000467539 PMAIP1Q13794 54 aa5.47□□□□□ -1.53
CGREF1-208ENST00000467539 KRTAP6-1Q3LI64 71 aa5.46□□□□□ -1.54
CGREF1-208ENST00000467539 KRTAP9-6A8MVA2 160 aa5.44□□□□□ -1.54
CGREF1-208ENST00000467539 KRTAP5-2Q701N4 177 aa5.38□□□□□ -1.55
CGREF1-208ENST00000467539 KRTAP9-4Q9BYQ2 154 aa5.34□□□□□ -1.55
CGREF1-208ENST00000467539 KRTAP4-11Q9BYQ6 195 aa5.28□□□□□ -1.56
CGREF1-208ENST00000467539 SVIPQ8NHG7 77 aa5.22□□□□□ -1.57
CGREF1-208ENST00000467539 KRTAP6-2Q3LI66 62 aa5.21□□□□□ -1.58
CGREF1-208ENST00000467539 KTN1-AS1Q86SY8 53 aa5.15□□□□□ -1.59
CGREF1-208ENST00000467539 KRTAP5-8O75690 187 aa5.1□□□□□ -1.59
CGREF1-208ENST00000467539 MT3P25713 68 aa5.05□□□□□ -1.6
CGREF1-208ENST00000467539 PRAC1Q96KF2 57 aa5.05□□□□□ -1.6
CGREF1-208ENST00000467539 OBSCNQ5VST9 7968 aa4.98□□□□□ -1.61
CGREF1-208ENST00000467539 MUC5BQ9HC84 5762 aaPredicted RBP4.85□□□□□ -1.63
CGREF1-208ENST00000467539 KRTAP9-9Q9BYP9 154 aa4.83□□□□□ -1.64
CGREF1-208ENST00000467539 KRTAP5-1Q6L8H4 278 aa4.82□□□□□ -1.64
CGREF1-208ENST00000467539 AHNAKQ09666 5890 aaKnown RBP4.81□□□□□ -1.64
CGREF1-208ENST00000467539 MUC5ACP98088 5654 aa4.79□□□□□ -1.64
CGREF1-208ENST00000467539 LCE1EQ5T753 118 aa4.66□□□□□ -1.66
CGREF1-208ENST00000467539 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
CGREF1-208ENST00000467539 LUZP6Q538Z0 58 aa4.34□□□□□ -1.71
CGREF1-208ENST00000467539 LCE1BQ5T7P3 118 aa4.33□□□□□ -1.72
CGREF1-208ENST00000467539 LCE1CQ5T751 118 aa4.31□□□□□ -1.72
CGREF1-208ENST00000467539 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
CGREF1-208ENST00000467539 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
CGREF1-208ENST00000467539 KRTAP4-12Q9BQ66 201 aa3.93□□□□□ -1.78
CGREF1-208ENST00000467539 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
CGREF1-208ENST00000467539 NDUFAF8A1L188 74 aa3.89□□□□□ -1.79
CGREF1-208ENST00000467539 KRTAP5-11Q6L8G4 156 aa3.88□□□□□ -1.79
CGREF1-208ENST00000467539 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
CGREF1-208ENST00000467539 H3BS24 57 aa3.71□□□□□ -1.82
CGREF1-208ENST00000467539 KRTAP21-2Q3LI59 83 aa3.61□□□□□ -1.83
CGREF1-208ENST00000467539 A0A0A0MQY5 61 aa3.46□□□□□ -1.86
CGREF1-208ENST00000467539 PHGR1C9JFL3 82 aa3.36□□□□□ -1.87
CGREF1-208ENST00000467539 INE1O15225 51 aa3.31□□□□□ -1.88
CGREF1-208ENST00000467539 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
CGREF1-208ENST00000467539 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
CGREF1-208ENST00000467539 PRM1P04553 51 aa2.92□□□□□ -1.94
CGREF1-208ENST00000467539 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
CGREF1-208ENST00000467539 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 42.8 ms