RNA–Protein interactions for RNA: ENST00000467529.5

TMEM254-209, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 1,963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-209ENST00000467529 KRTAP4-11Q9BYQ6 195 aa3.49□□□□□ -1.85
TMEM254-209ENST00000467529 SSPOA2VEC9 5147 aa3.49□□□□□ -1.85
TMEM254-209ENST00000467529 KRTAP19-6Q3LI70 58 aa3.46□□□□□ -1.86
TMEM254-209ENST00000467529 KRTAP12-3P60328 96 aa3.42□□□□□ -1.86
TMEM254-209ENST00000467529 KMT2DO14686 5537 aa3.38□□□□□ -1.87
TMEM254-209ENST00000467529 KRTAP19-5Q3LI72 72 aa3.37□□□□□ -1.87
TMEM254-209ENST00000467529 FSIP2Q5CZC0 6907 aa3.36□□□□□ -1.87
TMEM254-209ENST00000467529 KRTAP19-4Q3LI73 84 aa3.31□□□□□ -1.88
TMEM254-209ENST00000467529 FCGBPQ9Y6R7 5405 aaPredicted RBP3.31□□□□□ -1.88
TMEM254-209ENST00000467529 KRTAP19-7Q3SYF9 63 aa3.31□□□□□ -1.88
TMEM254-209ENST00000467529 MT1EP04732 61 aa3.23□□□□□ -1.89
TMEM254-209ENST00000467529 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
TMEM254-209ENST00000467529 CRCT1Q9UGL9 99 aa3.2□□□□□ -1.9
TMEM254-209ENST00000467529 MT1LQ93083 61 aa3.19□□□□□ -1.9
TMEM254-209ENST00000467529 LCE4AQ5TA78 99 aa3.16□□□□□ -1.9
TMEM254-209ENST00000467529 LCE5AQ5TCM9 118 aa3.12□□□□□ -1.91
TMEM254-209ENST00000467529 KRTAP9-7A8MTY7 169 aa3.1□□□□□ -1.91
TMEM254-209ENST00000467529 SPRR2FQ96RM1 72 aa3.1□□□□□ -1.91
TMEM254-209ENST00000467529 MUC12Q9UKN1 5478 aa3.09□□□□□ -1.91
TMEM254-209ENST00000467529 MACF1Q9UPN3 7388 aaKnown RBP3.08□□□□□ -1.92
TMEM254-209ENST00000467529 KRTAP19-3Q7Z4W3 81 aa3.08□□□□□ -1.92
TMEM254-209ENST00000467529 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
TMEM254-209ENST00000467529 MT1GP13640 62 aa3.05□□□□□ -1.92
TMEM254-209ENST00000467529 KRTAP2-2Q9BYT5 123 aa3.05□□□□□ -1.92
TMEM254-209ENST00000467529 MT1MQ8N339 61 aa3.04□□□□□ -1.92
TMEM254-209ENST00000467529 KRTAP4-3Q9BYR4 195 aa3.02□□□□□ -1.93
TMEM254-209ENST00000467529 KRTAP5-9P26371 169 aa3.01□□□□□ -1.93
TMEM254-209ENST00000467529 SYNE2Q8WXH0 6885 aaKnown RBP2.97□□□□□ -1.93
TMEM254-209ENST00000467529 LCE1AQ5T7P2 110 aa2.95□□□□□ -1.94
TMEM254-209ENST00000467529 MDN1Q9NU22 5596 aa2.93□□□□□ -1.94
TMEM254-209ENST00000467529 SPRR2EP22531 72 aa2.91□□□□□ -1.94
TMEM254-209ENST00000467529 SPRR2BP35325 72 aa2.91□□□□□ -1.94
TMEM254-209ENST00000467529 SPRR2AP35326 72 aa2.91□□□□□ -1.94
TMEM254-209ENST00000467529 KRTAP6-3Q3LI67 103 aa2.91□□□□□ -1.94
TMEM254-209ENST00000467529 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
TMEM254-209ENST00000467529 KRTAP2-3P0C7H8 128 aa2.91□□□□□ -1.94
TMEM254-209ENST00000467529 KRTAP2-4Q9BYR9 128 aa2.91□□□□□ -1.94
TMEM254-209ENST00000467529 KRTAP2-1Q9BYU5 128 aa2.91□□□□□ -1.94
TMEM254-209ENST00000467529 DSTQ03001 7570 aaKnown RBP2.81□□□□□ -1.96
TMEM254-209ENST00000467529 SPRR2DP22532 72 aa2.8□□□□□ -1.96
TMEM254-209ENST00000467529 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
TMEM254-209ENST00000467529 KRTAP5-5Q701N2 237 aaPredicted RBP2.72□□□□□ -1.97
TMEM254-209ENST00000467529 NEBP20929 6669 aa2.71□□□□□ -1.98
TMEM254-209ENST00000467529 MT1AP04731 61 aa2.7□□□□□ -1.98
TMEM254-209ENST00000467529 KRTAP6-1Q3LI64 71 aa2.69□□□□□ -1.98
TMEM254-209ENST00000467529 GPR98Q8WXG9 6306 aa2.68□□□□□ -1.98
TMEM254-209ENST00000467529 MT3P25713 68 aa2.67□□□□□ -1.98
TMEM254-209ENST00000467529 KRTAP20-1Q3LI63 56 aa2.66□□□□□ -1.98
TMEM254-209ENST00000467529 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
TMEM254-209ENST00000467529 SYNE1Q8NF91 8797 aaKnown RBP2.55□□□□□ -2
TMEM254-209ENST00000467529 KRTAP5-4Q6L8H1 288 aa2.55□□□□□ -2
TMEM254-209ENST00000467529 KRTAP12-4P60329 112 aa2.51□□□□□ -2.01
TMEM254-209ENST00000467529 KRTAP6-2Q3LI66 62 aa2.46□□□□□ -2.02
TMEM254-209ENST00000467529 MT4P47944 62 aa2.44□□□□□ -2.02
TMEM254-209ENST00000467529 LCE3DQ9BYE3 92 aa2.41□□□□□ -2.02
TMEM254-209ENST00000467529 KRTAP20-2Q3LI61 65 aa2.38□□□□□ -2.03
TMEM254-209ENST00000467529 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
TMEM254-209ENST00000467529 HMCN1Q96RW7 5635 aa2.34□□□□□ -2.03
TMEM254-209ENST00000467529 KRTAP5-2Q701N4 177 aa2.33□□□□□ -2.04
TMEM254-209ENST00000467529 KRTAP5-1Q6L8H4 278 aa2.32□□□□□ -2.04
TMEM254-209ENST00000467529 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
TMEM254-209ENST00000467529 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
TMEM254-209ENST00000467529 OBSCNQ5VST9 7968 aa2.21□□□□□ -2.06
TMEM254-209ENST00000467529 PRM1P04553 51 aa2.19□□□□□ -2.06
TMEM254-209ENST00000467529 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
TMEM254-209ENST00000467529 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
TMEM254-209ENST00000467529 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
TMEM254-209ENST00000467529 KRTAP5-10Q6L8G5 202 aa2.07□□□□□ -2.08
TMEM254-209ENST00000467529 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
TMEM254-209ENST00000467529 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
TMEM254-209ENST00000467529 MUC5ACP98088 5654 aa2□□□□□ -2.09
TMEM254-209ENST00000467529 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
TMEM254-209ENST00000467529 LCE1CQ5T751 118 aa1.94□□□□□ -2.1
TMEM254-209ENST00000467529 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
TMEM254-209ENST00000467529 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
TMEM254-209ENST00000467529 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
TMEM254-209ENST00000467529 MUC19Q7Z5P9 8384 aa1.38□□□□□ -2.19
TMEM254-209ENST00000467529 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 34.1 ms